Alkalicella caledoniensis: HYG86_00545
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Entry
HYG86_00545 CDS
T07204
Symbol
ltrA
Name
(GenBank) group II intron reverse transcriptase/maturase
KO
K00986
RNA-directed DNA polymerase [EC:
2.7.7.49
]
Organism
acae
Alkalicella caledoniensis
Brite
KEGG Orthology (KO) [BR:
acae00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
HYG86_00545 (ltrA)
Enzymes [BR:
acae01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.49 RNA-directed DNA polymerase
HYG86_00545 (ltrA)
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Gene cluster
GFIT
Motif
Pfam:
RVT_1
RVT_N
HNH
GIIM
Motif
Other DBs
NCBI-ProteinID:
QNO13364
UniProt:
A0A7G9W3V2
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All DBs
Position
complement(96022..97851)
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AA seq
609 aa
AA seq
DB search
MMLQKGETPLNTFLRHAEYYGMQETFDNLHEESKLSKKFYNLYDLIISEENILLAYRSIK
SNSGAKTAGIDNTVIGDLKELTPKQLVSLIQTKLGNYKPKAVRRIFIPKENGDQRPLGIP
TIIDRLIQQMIKQIIEPIAEAKFYKHSYGFRPLRNTHHAIARAQTLINIGRLHYVIDIDI
KGFFDNVNHNSLIKQIWNLGIRDKRVIAIISKILKTPIQGEGRANKGVPQGGVLSPLLSN
IVLHDLDQWVYSQWEGMKTKWPYKRQGDKIKRLKNTNLKEGYLVRYADDFKVFARNSQTA
YKWFYAIKKYLKDRLKLDISPEKSKVTNLRKKKSDFLGYRLKANLKGSKYVAHTYMKKKK
KTAIKQGLKEAIKKIKQSPTRENAMKLNSMIMGLHQYFKYMTHVFKEFSDISFSLSKAMY
NGFKRYGRYEHPKSISCAFKKYYNTTYRTWRIAGVYIFPIADISTQTSLNFSPSLNIFTE
EGRKTIHKRLQQQITLELPKLMESANLTYRTTEYIDNRISRYSMTMGKCEITCIYLPAEM
VHCHHYVPTKLGGTDKYHNLRIVHKDVHKLIHATEIKIIKKYMESLKLDIGTLDKINRYR
EKCNLEALS
NT seq
1830 nt
NT seq
+upstream
nt +downstream
nt
atgatgctccagaaaggagaaaccccactgaacacattcctacgacatgcagaatactat
ggtatgcaggaaacctttgataatcttcacgaagaaagtaaattatcaaagaagttttac
aatctctatgatttaatcattagcgaggaaaacatcctattagcatatcgcagtataaaa
agtaacagtggtgctaaaacagcaggaatagataacactgttataggtgatttaaaagaa
ctaacacccaaacaattagtttctttaatccaaacaaaattaggcaactacaaacccaag
gctgttagaagaattttcattccaaaggaaaatggtgatcaaagacccttaggcatacca
actatcatcgaccgattaatacaacaaatgataaaacaaatcatagaacctattgcagaa
gctaaattctataaacatagctacggatttaggcccttaagaaacacacatcatgcaata
gcaagggctcaaaccctaatcaatataggtagactacactatgtaatagatatagatatc
aaaggattctttgacaatgtaaatcacaatagcttgataaaacaaatatggaaccttggc
ataagagataaaagagtaatagcaattatctctaagatattaaaaacacctatccaagga
gaaggtagagcaaataagggagtgcctcaaggtggagtattatcaccattactttcaaac
atagtcctacatgacttagatcaatgggtttatagtcaatgggaaggaatgaaaactaag
tggccatacaagagacaaggtgataagattaaaagattgaaaaatactaacctaaaagaa
ggataccttgtacgttatgccgatgattttaaagtgtttgcaagaaatagtcaaacagcc
tacaaatggttttatgccataaagaaataccttaaagaccgattaaaattagatatctca
cctgaaaaatcaaaggtaacaaatttgagaaaaaagaaatcggattttttaggatatcgt
cttaaggcaaatttaaaaggcagtaaatatgttgcacacacctatatgaagaagaaaaag
aaaacagccataaaacaaggattaaaagaagcgattaagaaaatcaaacaatcaccaaca
agagaaaacgccatgaaattaaattctatgataatggggctacatcaatatttcaaatat
atgacccatgtgtttaaagaatttagtgacatctccttttctctctcgaaagctatgtat
aatggtttcaaacgttatggacgatatgagcatcctaaaagcatatcatgtgcttttaaa
aagtattataacaccacctatcgaacttggaggattgcaggtgtgtatatttttccaata
gcagatattagcacacaaacaagcttaaattttagtccaagtctgaacatatttaccgaa
gaaggaagaaagaccattcacaaaaggttacaacaacaaattacgttagaattacctaag
ctgatggaatcagctaatcttacttatcgtactacagaatatatagacaacaggatatca
agatattcaatgactatgggtaaatgtgagataacttgcatatatcttccagcggaaatg
gttcattgtcatcattatgtaccaacaaaattaggtggaacagataaataccataactta
agaatcgttcataaagatgtgcacaaactcatccatgctacagaaatcaaaataattaag
aaatatatggaatccttaaagttagacatagggactctagacaaaatcaatagatatcgt
gagaaatgtaaccttgaagcattgagttga
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