KEGG   Alkalicella caledoniensis: HYG86_17600
Entry
HYG86_17600       CDS       T07204                                 
Name
(GenBank) PolC-type DNA polymerase III
  KO
K03763  DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7]
Organism
acae  Alkalicella caledoniensis
Pathway
acae03030  DNA replication
acae03430  Mismatch repair
acae03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:acae00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    HYG86_17600
   03430 Mismatch repair
    HYG86_17600
   03440 Homologous recombination
    HYG86_17600
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:acae03032]
    HYG86_17600
   03400 DNA repair and recombination proteins [BR:acae03400]
    HYG86_17600
Enzymes [BR:acae01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     HYG86_17600
DNA replication proteins [BR:acae03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     HYG86_17600
DNA repair and recombination proteins [BR:acae03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     HYG86_17600
SSDB
Motif
Pfam: DNA_pol3_alpha RNase_T PHP DNA_pol3_finger HHH_6 tRNA_anti-codon RNase_H_2 DEDDh_C DNA_pol_A_exo1 HHH_3 DNA_pol3_a_NII YhfH
Other DBs
NCBI-ProteinID: QNO16460
UniProt: A0A7G9WCP8
LinkDB
Position
3573368..3577570
AA seq 1400 aa
MTIDKLINNPNINIQKISVSTHRQGWVIYITGPASIVNDLKTLEKKIISEVAGLKEVCFC
ILKDGTSPQDDEIIKLNLDFIKKQLATEFPAVQSTISNWKLEVKSQNIIFSLNNNLQHYY
VNMKSIHRWLEKFVWDTWRQEVKVDFILDQSSNVPLTKHKEKEKEYILELVKKIPDKNVE
VSKGDAVLRGKNIVKDPKPIFEIIEEDRNICMWGKVITFEQRELRSGRTLVTFDICDYTD
SISCKLFLEEGEKFPTINPGTFIKVYGNIQHDKYSQELTVLPRDVNKISIELKKDSAEIK
RVELHAHTKMSSMDATTSAADLVKRAAHWGHEAIAITDHGVVQAFPDAYDAGKKHGVKII
YGVEAYLVDDMDNNIVINPKNKALKDITYVVFDLETTGLDSKNEEIIEIGAVKMRDGEIV
DQFSALIKPDKIIPDKITEITGITNEHVKGSPSIDTVLPEFLEFCGESTLVAHNANFDYG
FLTNWCQKLQYDLNTCVIDTLSLSRALVRDVKNHKLNTLAKHFGIELKNHHRAVDDCKAT
AQLFKHLLDECTKLGCNDIKSLTKIPIEGNIKNQKSFHCILLVKDPTGLKNLYKLISFAH
TKYFYRQPKIPKSLINNFREGLIIGSACEAGEIFKMFLDGKPNNEIEEKARFYDYLEIQP
VDNNEFLVRDGFVQGRRDIEEINKQIIALGDKQNKLVVATGDVHFLDEDDSVYREILMAG
KGFADASNQPPLHFKTTQEMLDDFSYLTKEQREAVVIHNPRAIAEQIEILQPIPDDLFTP
KIENSDEMLRDMCIKRSEEQYGIPVPDTVKARLEKELNSIIKHGFGVIYYISHKLVTKSL
SDGYLVGSRGSVGSSLVATFSDITEVNPLPPHYLCPICKFSEFYEDGSVGSGVDLPDKDC
PKCGNKLKKDGHDIPFETFLGFNGDKVPDIDLNFSGEYQPMAHKYTEELFGRDYVFRAGT
IATVAEKTAYGFVQNYLSDKNLRKRSAEVNRLVQGCTGIKRTTGQHPGGLMVVPNYMDIY
DFCPVQHPADDRESTTITTHFDYHSIGDNLLKLDILGHDDPTVIKMLEDITGLNALEIPL
DDKKTMSLFSSTKAIGLSEKELGSKVATLGIPEFGTKFVRQMLEDTKPTTFSELVRISGL
SHGTDVWLNNAQELVKNNIATLSEVISTRDDIMVYLIYKGLEPSMAFTIMESVRKGKGLK
EEHIKSMKENNVPDWYIDSCLKIKYMFPKAHAVAYVTMAFRIAYCKVNYPLAFYAAYFTV
RADEFNTEMIKEGERGVRNQIRALNEKGNNLTTKEKSQLTVLEIILEMFLRGYTFNKVDL
YKSYHSNFIIEGKTLIPPFIAIGGLGKNAAISVVEAREKGQFISIEDLRQRTGLSKTVLQ
TMQDLGYLEGLPQTNQLSLF
NT seq 4203 nt   +upstreamnt  +downstreamnt
atgactatagataaattaattaataatcccaatataaatatacaaaaaatttctgtatca
acccatcgacaaggatgggttatttacataactggcccggccagtatagtgaatgattta
aagacccttgaaaaaaagataatcagtgaagttgccggacttaaagaagtgtgtttttgt
atattaaaagatgggacaagccctcaagacgatgagattataaaattaaacttagatttt
ataaagaagcaactggcaactgaattccctgctgtgcaaagcacaataagtaattggaag
ttagaagtgaaatcacagaacattattttttccttaaacaacaacctccaacattattat
gttaacatgaaaagtattcacagatggcttgaaaaatttgtttgggacacttggaggcaa
gaagttaaagtagattttatactagatcaaagttctaatgttccactaaccaaacataag
gaaaaggaaaaggaatatatactagaacttgttaaaaagataccagataaaaatgtggaa
gttagtaaaggcgatgccgtattaaggggaaaaaatatagtcaaagaccccaaaccaatc
tttgagataatcgaggaagacagaaatatatgtatgtggggaaaagtaataacttttgaa
caaagggagcttaggtcaggtagaacattagtaaccttcgatatttgcgactacacagac
tccatatcatgcaagttattcctagaggaaggggaaaaattccctaccattaaccctggg
accttcataaaagtttatggaaatattcagcacgataagtattcacaagaactcacggta
ttaccccgggacgtaaacaaaataagtattgaactaaaaaaagatagtgctgaaattaaa
agggtagagctacatgcacatactaaaatgagctcaatggatgctaccacttccgcagca
gacctcgttaaaagagctgcacattggggacatgaagcaattgccataacagaccatgga
gttgttcaggctttccctgatgcttatgatgcaggcaaaaaacatggtgttaagataatt
tacggagtagaggcatacctcgttgacgatatggataacaatattgttataaatcctaag
aacaaagcattgaaggatataacctacgtggtttttgacctcgaaacaacaggactcgat
tctaaaaatgaggaaataattgaaattggtgctgtaaagatgagagatggtgaaatagtt
gaccaattttcggcccttattaaacctgataagataataccggacaagataactgaaatc
acaggcataacaaatgagcatgtaaaaggttctccttccatagacacagttttacctgaa
tttcttgaattttgtggtgaaagtacacttgtggctcacaatgctaattttgactatggg
tttttaactaattggtgtcaaaaattacagtacgaccttaacacatgtgtaattgatact
ctttccttaagtcgagcattagtaagagatgtaaaaaatcataaactaaatacgctagct
aagcattttgggatagaacttaaaaaccatcatagggcagttgatgattgtaaagctaca
gcacaattatttaaacacctcttagatgaatgtaccaaactaggatgtaatgatattaaa
tcattaacaaaaatacccatagaaggtaatatcaaaaaccaaaagagctttcattgtatt
ttacttgttaaagaccctacggggttaaaaaacctatataaacttatatcctttgcccat
acaaaatacttttatcgtcaacctaagattccaaaatcactaataaacaactttagggaa
ggtttaattattggatctgcatgtgaagcaggggaaatttttaaaatgtttttagatgga
aaaccaaacaatgaaatagaagaaaaagcaagattttatgattacctagaaatacaacca
gtggataataacgagtttttggttagagatggctttgtgcaggggcgaagggatattgaa
gaaatcaacaaacaaataattgccttaggggataagcaaaataaacttgtggtggcaaca
ggtgacgtgcactttttagatgaagatgactccgtgtatagagagatattgatggcaggt
aaaggctttgcagatgcaagcaatcaaccacctctgcattttaaaaccacccaagagatg
ctagatgacttctcttaccttacaaaagaacaaagggaagcggtagttatacacaaccct
agagcaatagcagaacaaatagaaatactacaacctatacctgacgacctcttcacacct
aaaatcgaaaactccgatgaaatgctaagggacatgtgtattaaaaggagtgaagagcaa
tacggtataccagtacccgatactgtaaaagctcgccttgaaaaagagttgaactctatt
attaaacatggttttggggtaatatattatatttctcataaactggttaccaaatcttta
agtgatggttacttagtaggatctagaggatccgtggggtcttccttagtggcgaccttt
tccgacataactgaggttaatccactgccaccacactacctatgcccaatctgcaaattc
tcggagttttacgaagatggttctgtaggttctggtgttgacttgcctgataaagattgt
cctaagtgtggaaataagttaaaaaaagatggtcacgatatcccatttgaaacatttcta
gggttcaatggtgacaaggtcccagatattgatttgaacttttcaggtgaatatcaacca
atggcacataaatatacagaagagctatttggaagggattatgtgtttagggcagggact
atagccacagttgctgaaaaaactgcatatggctttgtccaaaactacctatcggacaaa
aatctgagaaaaagaagcgcagaagttaacagacttgttcaagggtgtacaggaataaaa
aggacaactggacagcatccaggtggtttaatggtagttcctaattatatggatatctac
gatttttgtcctgtgcaacatcctgctgatgatagagaatctacaacaataaccacacac
tttgactatcattcaattggtgacaatttgttaaagcttgatatattggggcatgatgat
cccactgtcataaaaatgttagaggacattacaggactaaacgcactggagattccccta
gacgataaaaaaacaatgtcattattttcatcaacaaaagccatcggacttagtgaaaaa
gaactaggttctaaggttgctactttgggtatacctgagtttggaactaagtttgttaga
cagatgttagaggatactaaacctacgactttttctgagcttgtgcgaataagtggtctc
tcacacggaactgatgtatggttgaataatgcacaagaattggtaaagaataatattgca
acactttcagaagttatatcaacaagggacgatataatggtgtatttaatctataaaggt
ttagagccttccatggcctttacaattatggaaagtgttcgtaaaggtaaaggattaaaa
gaggaacatattaaatccatgaaagaaaacaacgtcccagactggtacattgattcttgt
ctgaagataaaatacatgttcccgaaagcccatgcagttgcatatgttacaatggccttt
agaatagcttattgtaaagttaattaccccttagcattttacgctgcttacttcaccgta
cgagccgatgaatttaacacggaaatgataaaagaaggtgaaagaggtgtccgtaatcaa
attcgggcattaaacgaaaagggaaacaatttaacaacaaaggaaaaatctcaactgaca
gtgctagaaataattttagaaatgttcttaaggggttatacttttaataaagtagatctt
tacaaatcctatcacagtaatttcattattgaaggtaaaaccttaattcctccttttatt
gcaattggtggattaggaaaaaatgctgcaataagtgtggtggaagctagggaaaaaggg
caatttatttccatcgaagatttaagacagagaacagggctgtctaaaacggtattacag
acaatgcaagacttaggttatttagaaggtttaccccagacaaatcaactttccctgttt
taa

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