Alkalicella caledoniensis: HYG86_17600
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Entry
HYG86_17600 CDS
T07204
Name
(GenBank) PolC-type DNA polymerase III
KO
K03763
DNA polymerase III subunit alpha, Gram-positive type [EC:
2.7.7.7
]
Organism
acae
Alkalicella caledoniensis
Pathway
acae03030
DNA replication
acae03430
Mismatch repair
acae03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
acae00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
HYG86_17600
03430 Mismatch repair
HYG86_17600
03440 Homologous recombination
HYG86_17600
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
acae03032
]
HYG86_17600
03400 DNA repair and recombination proteins [BR:
acae03400
]
HYG86_17600
Enzymes [BR:
acae01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
HYG86_17600
DNA replication proteins [BR:
acae03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
HYG86_17600
DNA repair and recombination proteins [BR:
acae03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
HYG86_17600
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
RNase_T
PHP
DNA_pol3_finger
HHH_6
tRNA_anti-codon
RNase_H_2
DEDDh_C
DNA_pol_A_exo1
HHH_3
DNA_pol3_a_NII
YhfH
Motif
Other DBs
NCBI-ProteinID:
QNO16460
UniProt:
A0A7G9WCP8
LinkDB
All DBs
Position
3573368..3577570
Genome browser
AA seq
1400 aa
AA seq
DB search
MTIDKLINNPNINIQKISVSTHRQGWVIYITGPASIVNDLKTLEKKIISEVAGLKEVCFC
ILKDGTSPQDDEIIKLNLDFIKKQLATEFPAVQSTISNWKLEVKSQNIIFSLNNNLQHYY
VNMKSIHRWLEKFVWDTWRQEVKVDFILDQSSNVPLTKHKEKEKEYILELVKKIPDKNVE
VSKGDAVLRGKNIVKDPKPIFEIIEEDRNICMWGKVITFEQRELRSGRTLVTFDICDYTD
SISCKLFLEEGEKFPTINPGTFIKVYGNIQHDKYSQELTVLPRDVNKISIELKKDSAEIK
RVELHAHTKMSSMDATTSAADLVKRAAHWGHEAIAITDHGVVQAFPDAYDAGKKHGVKII
YGVEAYLVDDMDNNIVINPKNKALKDITYVVFDLETTGLDSKNEEIIEIGAVKMRDGEIV
DQFSALIKPDKIIPDKITEITGITNEHVKGSPSIDTVLPEFLEFCGESTLVAHNANFDYG
FLTNWCQKLQYDLNTCVIDTLSLSRALVRDVKNHKLNTLAKHFGIELKNHHRAVDDCKAT
AQLFKHLLDECTKLGCNDIKSLTKIPIEGNIKNQKSFHCILLVKDPTGLKNLYKLISFAH
TKYFYRQPKIPKSLINNFREGLIIGSACEAGEIFKMFLDGKPNNEIEEKARFYDYLEIQP
VDNNEFLVRDGFVQGRRDIEEINKQIIALGDKQNKLVVATGDVHFLDEDDSVYREILMAG
KGFADASNQPPLHFKTTQEMLDDFSYLTKEQREAVVIHNPRAIAEQIEILQPIPDDLFTP
KIENSDEMLRDMCIKRSEEQYGIPVPDTVKARLEKELNSIIKHGFGVIYYISHKLVTKSL
SDGYLVGSRGSVGSSLVATFSDITEVNPLPPHYLCPICKFSEFYEDGSVGSGVDLPDKDC
PKCGNKLKKDGHDIPFETFLGFNGDKVPDIDLNFSGEYQPMAHKYTEELFGRDYVFRAGT
IATVAEKTAYGFVQNYLSDKNLRKRSAEVNRLVQGCTGIKRTTGQHPGGLMVVPNYMDIY
DFCPVQHPADDRESTTITTHFDYHSIGDNLLKLDILGHDDPTVIKMLEDITGLNALEIPL
DDKKTMSLFSSTKAIGLSEKELGSKVATLGIPEFGTKFVRQMLEDTKPTTFSELVRISGL
SHGTDVWLNNAQELVKNNIATLSEVISTRDDIMVYLIYKGLEPSMAFTIMESVRKGKGLK
EEHIKSMKENNVPDWYIDSCLKIKYMFPKAHAVAYVTMAFRIAYCKVNYPLAFYAAYFTV
RADEFNTEMIKEGERGVRNQIRALNEKGNNLTTKEKSQLTVLEIILEMFLRGYTFNKVDL
YKSYHSNFIIEGKTLIPPFIAIGGLGKNAAISVVEAREKGQFISIEDLRQRTGLSKTVLQ
TMQDLGYLEGLPQTNQLSLF
NT seq
4203 nt
NT seq
+upstream
nt +downstream
nt
atgactatagataaattaattaataatcccaatataaatatacaaaaaatttctgtatca
acccatcgacaaggatgggttatttacataactggcccggccagtatagtgaatgattta
aagacccttgaaaaaaagataatcagtgaagttgccggacttaaagaagtgtgtttttgt
atattaaaagatgggacaagccctcaagacgatgagattataaaattaaacttagatttt
ataaagaagcaactggcaactgaattccctgctgtgcaaagcacaataagtaattggaag
ttagaagtgaaatcacagaacattattttttccttaaacaacaacctccaacattattat
gttaacatgaaaagtattcacagatggcttgaaaaatttgtttgggacacttggaggcaa
gaagttaaagtagattttatactagatcaaagttctaatgttccactaaccaaacataag
gaaaaggaaaaggaatatatactagaacttgttaaaaagataccagataaaaatgtggaa
gttagtaaaggcgatgccgtattaaggggaaaaaatatagtcaaagaccccaaaccaatc
tttgagataatcgaggaagacagaaatatatgtatgtggggaaaagtaataacttttgaa
caaagggagcttaggtcaggtagaacattagtaaccttcgatatttgcgactacacagac
tccatatcatgcaagttattcctagaggaaggggaaaaattccctaccattaaccctggg
accttcataaaagtttatggaaatattcagcacgataagtattcacaagaactcacggta
ttaccccgggacgtaaacaaaataagtattgaactaaaaaaagatagtgctgaaattaaa
agggtagagctacatgcacatactaaaatgagctcaatggatgctaccacttccgcagca
gacctcgttaaaagagctgcacattggggacatgaagcaattgccataacagaccatgga
gttgttcaggctttccctgatgcttatgatgcaggcaaaaaacatggtgttaagataatt
tacggagtagaggcatacctcgttgacgatatggataacaatattgttataaatcctaag
aacaaagcattgaaggatataacctacgtggtttttgacctcgaaacaacaggactcgat
tctaaaaatgaggaaataattgaaattggtgctgtaaagatgagagatggtgaaatagtt
gaccaattttcggcccttattaaacctgataagataataccggacaagataactgaaatc
acaggcataacaaatgagcatgtaaaaggttctccttccatagacacagttttacctgaa
tttcttgaattttgtggtgaaagtacacttgtggctcacaatgctaattttgactatggg
tttttaactaattggtgtcaaaaattacagtacgaccttaacacatgtgtaattgatact
ctttccttaagtcgagcattagtaagagatgtaaaaaatcataaactaaatacgctagct
aagcattttgggatagaacttaaaaaccatcatagggcagttgatgattgtaaagctaca
gcacaattatttaaacacctcttagatgaatgtaccaaactaggatgtaatgatattaaa
tcattaacaaaaatacccatagaaggtaatatcaaaaaccaaaagagctttcattgtatt
ttacttgttaaagaccctacggggttaaaaaacctatataaacttatatcctttgcccat
acaaaatacttttatcgtcaacctaagattccaaaatcactaataaacaactttagggaa
ggtttaattattggatctgcatgtgaagcaggggaaatttttaaaatgtttttagatgga
aaaccaaacaatgaaatagaagaaaaagcaagattttatgattacctagaaatacaacca
gtggataataacgagtttttggttagagatggctttgtgcaggggcgaagggatattgaa
gaaatcaacaaacaaataattgccttaggggataagcaaaataaacttgtggtggcaaca
ggtgacgtgcactttttagatgaagatgactccgtgtatagagagatattgatggcaggt
aaaggctttgcagatgcaagcaatcaaccacctctgcattttaaaaccacccaagagatg
ctagatgacttctcttaccttacaaaagaacaaagggaagcggtagttatacacaaccct
agagcaatagcagaacaaatagaaatactacaacctatacctgacgacctcttcacacct
aaaatcgaaaactccgatgaaatgctaagggacatgtgtattaaaaggagtgaagagcaa
tacggtataccagtacccgatactgtaaaagctcgccttgaaaaagagttgaactctatt
attaaacatggttttggggtaatatattatatttctcataaactggttaccaaatcttta
agtgatggttacttagtaggatctagaggatccgtggggtcttccttagtggcgaccttt
tccgacataactgaggttaatccactgccaccacactacctatgcccaatctgcaaattc
tcggagttttacgaagatggttctgtaggttctggtgttgacttgcctgataaagattgt
cctaagtgtggaaataagttaaaaaaagatggtcacgatatcccatttgaaacatttcta
gggttcaatggtgacaaggtcccagatattgatttgaacttttcaggtgaatatcaacca
atggcacataaatatacagaagagctatttggaagggattatgtgtttagggcagggact
atagccacagttgctgaaaaaactgcatatggctttgtccaaaactacctatcggacaaa
aatctgagaaaaagaagcgcagaagttaacagacttgttcaagggtgtacaggaataaaa
aggacaactggacagcatccaggtggtttaatggtagttcctaattatatggatatctac
gatttttgtcctgtgcaacatcctgctgatgatagagaatctacaacaataaccacacac
tttgactatcattcaattggtgacaatttgttaaagcttgatatattggggcatgatgat
cccactgtcataaaaatgttagaggacattacaggactaaacgcactggagattccccta
gacgataaaaaaacaatgtcattattttcatcaacaaaagccatcggacttagtgaaaaa
gaactaggttctaaggttgctactttgggtatacctgagtttggaactaagtttgttaga
cagatgttagaggatactaaacctacgactttttctgagcttgtgcgaataagtggtctc
tcacacggaactgatgtatggttgaataatgcacaagaattggtaaagaataatattgca
acactttcagaagttatatcaacaagggacgatataatggtgtatttaatctataaaggt
ttagagccttccatggcctttacaattatggaaagtgttcgtaaaggtaaaggattaaaa
gaggaacatattaaatccatgaaagaaaacaacgtcccagactggtacattgattcttgt
ctgaagataaaatacatgttcccgaaagcccatgcagttgcatatgttacaatggccttt
agaatagcttattgtaaagttaattaccccttagcattttacgctgcttacttcaccgta
cgagccgatgaatttaacacggaaatgataaaagaaggtgaaagaggtgtccgtaatcaa
attcgggcattaaacgaaaagggaaacaatttaacaacaaaggaaaaatctcaactgaca
gtgctagaaataattttagaaatgttcttaaggggttatacttttaataaagtagatctt
tacaaatcctatcacagtaatttcattattgaaggtaaaaccttaattcctccttttatt
gcaattggtggattaggaaaaaatgctgcaataagtgtggtggaagctagggaaaaaggg
caatttatttccatcgaagatttaagacagagaacagggctgtctaaaacggtattacag
acaatgcaagacttaggttatttagaaggtttaccccagacaaatcaactttccctgttt
taa
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