Alienimonas californiensis: CA12_17230
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Entry
CA12_17230 CDS
T09792
Symbol
rimO
Name
(GenBank) Ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
acaf
Alienimonas californiensis
Brite
KEGG Orthology (KO) [BR:
acaf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
acaf03009
]
CA12_17230 (rimO)
Enzymes [BR:
acaf01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
CA12_17230 (rimO)
Ribosome biogenesis [BR:
acaf03009
]
Prokaryotic type
ribosomal protein modification factors
CA12_17230 (rimO)
BRITE hierarchy
Motif
Pfam:
Radical_SAM
UPF0004
TRAM_2
Motif
Other DBs
NCBI-ProteinID:
QDT15638
UniProt:
A0A517P8C7
LinkDB
All DBs
Position
complement(2182962..2184455)
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AA seq
497 aa
AA seq
DB search
MKNSLPILADPAASPFPASAPPVGDGAARGTYAFVSLGCPKNLVDSETMLGKLAASGYAL
VPDPDGADFVVVNTCGFIGPSREESKSVVREMLDLKAAGRTGGVVVAGCLPGRVGAEQVR
KDLPGVDHVMNVFGRDEISTVADRLTEGRRGVSPVTEQRDVFRPAAIRALDDTARLRITP
DHFAYLKISEGCDRTCTFCSIPMMRGRHVTKPIEQVVAEARELAADGVKELILVAQDTTY
YGLDLYGEVRLAALLRALEEVDGLEWIRLMYLYPIHFTDELIDTIAGSGKVLPYLDMPLQ
HVSDRVLKRMTRRTNRAKTEELVGKLRDRIPNLVLRTTMLVGFPGETEAEFQELVDFVTD
WRFERLGAFPFSPEPGTPSMKLDGHLPPEVCQERADALMAAQQTAAFAFADSLVGYELDV
LIDSDEGNGVYTGRTFADAPEIDGSVRLTLPGGIDAELEIGAFIPAELTARDGYDWLATA
ALLDDDDEYSDDGPDDD
NT seq
1494 nt
NT seq
+upstream
nt +downstream
nt
gtgaaaaacagcctgccgattctcgccgaccccgccgcgtcccccttcccggcgagcgca
ccgcccgtcggagacggcgccgcccgggggacctacgccttcgtctccctggggtgcccg
aagaacctcgtcgattcggagacgatgctcgggaagctggccgcgagcggctacgccctc
gtgccggacccggacggggcggacttcgttgtcgtgaacacctgcgggttcatcggaccc
agccgggaggaatcgaagtccgtcgtgcgggagatgctggacctgaaggccgccggccgc
accggcggggtggtggtcgccggctgcctgccgggccgggtgggggccgagcaggtgcgg
aaggacctgccgggggtcgatcacgtgatgaacgtcttcggccgggacgagatcagcacc
gtcgccgaccgcctcaccgagggccgccgcggcgtcagcccggtcacggagcagcgagac
gtgttccgccccgccgcgatccgggcgctggacgacacggcccggctgcggatcaccccg
gaccatttcgcctacctcaaaatcagcgagggctgcgaccggacctgcacgttctgttcg
atcccgatgatgcggggtcggcacgtcaccaagccgatcgagcaggtcgtcgccgaggcc
cgcgaactggccgccgacggggtgaaggagctgatcctcgtcgcccaggacaccacctat
tacggcctcgatctgtacggcgaggtgcggctcgcggcgctgctgcgggcgttggaggag
gtcgacgggctggagtggatccggctgatgtacctctacccgatccacttcaccgacgag
ctgatcgacacgatcgccggcagcggcaaggtgctgccgtacctcgacatgccgctgcaa
cacgtctccgaccgggtgcttaagcggatgacccgccgcacgaaccgggcgaagacggag
gaactggtcggcaagttgcgggaccgcatcccgaacctcgtgctgcggacgacgatgctg
gtcggcttccccggcgagaccgaggcggagttccaggaactggtcgatttcgtgaccgac
tggcggttcgagcgcctcggcgccttccccttcagcccggagcccggcacgcccagcatg
aagctcgacggccacctgccgccggaggtgtgccaggagcgggccgacgccctgatggcc
gcccagcagacggcggcgttcgccttcgcggattcgctggtggggtacgaactggacgtg
ctgatcgacagcgacgaggggaacggggtgtacacgggccggaccttcgccgacgccccg
gagatcgacggctccgtccgcctaaccttgccgggggggatcgacgcggaactggagatc
ggggcgttcatccccgcggaactgacggcccgggacggctacgactggctcgccacggcc
gccctcctcgatgacgacgacgagtactccgacgacgggccggatgacgactga
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