Anoxybacillus caldiproteolyticus: ISX45_15065
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Entry
ISX45_15065 CDS
T06899
Name
(GenBank) DNA-directed RNA polymerase subunit delta
KO
K03048
DNA-directed RNA polymerase subunit delta
Organism
acai
Anoxybacillus caldiproteolyticus
Pathway
acai03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
acai00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
ISX45_15065
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
acai03021
]
ISX45_15065
03400 DNA repair and recombination proteins [BR:
acai03400
]
ISX45_15065
Transcription machinery [BR:
acai03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
ISX45_15065
DNA repair and recombination proteins [BR:
acai03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
ISX45_15065
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HARE-HTH
HTH_AsnC-type
DUF4777
DUF2087
ColG_sub
Motif
Other DBs
NCBI-ProteinID:
QPA30855
LinkDB
All DBs
Position
complement(3004671..3005225)
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AA seq
184 aa
AA seq
DB search
MSLQQYSPEELREMSLVELAYLVMTEKKEALPFQQIVQEIAALIHLSEDEVRERIAQFYT
DLNIDGRFICIGENRWGLRSWYPYDQIEEETVPTIKPKKKKKVLDEFEDYDEIIDDEDLD
YDDLDDYEDEGDVDLDDDLLDDDEFDLDEADTFDDELLDEDEFDLADEELDEDLDIDEPE
EEEE
NT seq
555 nt
NT seq
+upstream
nt +downstream
nt
ttgagtttgcagcaatactctccagaagaattacgagaaatgtcacttgtcgaacttgct
tatttagtgatgacagaaaaaaaggaagcattgccatttcaacagattgttcaagaaatt
gctgcgctaatacacttatctgaagacgaagtaagagagcgcatcgcgcaattttataca
gatttaaatattgacggccggtttatttgtatcggagaaaatcgttggggtctacgttcc
tggtatccatatgatcaaattgaagaagaaacagtaccaaccatcaaaccgaagaagaag
aagaaagtattggatgagtttgaggattacgatgaaatcatagatgacgaagaccttgat
tacgatgatctcgatgactatgaagatgaaggagatgtcgatcttgacgacgatcttctt
gacgatgatgaattcgatctggatgaagcggatacatttgacgatgagcttctcgacgaa
gatgaatttgatttagcagacgaagagttagacgaagatcttgacattgacgagccagaa
gaagaggaagaatga
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