KEGG   Acanthamoeba castellanii: ACA1_116890
Entry
ACA1_116890       CDS       T02667                                 
Name
(RefSeq) DNA-directed RNA polymerase II family protein
  KO
K03017  DNA-directed RNA polymerase II subunit RPB9
Organism
acan  Acanthamoeba castellanii
Pathway
acan03020  RNA polymerase
acan03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:acan00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    ACA1_116890
  09124 Replication and repair
   03420 Nucleotide excision repair
    ACA1_116890
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:acan03021]
    ACA1_116890
   03400 DNA repair and recombination proteins [BR:acan03400]
    ACA1_116890
Transcription machinery [BR:acan03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol II specific subunits
     ACA1_116890
DNA repair and recombination proteins [BR:acan03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      ACA1_116890
SSDB
Motif
Pfam: RNA_POL_M_15KD TFIIS_C
Other DBs
NCBI-GeneID: 14921063
NCBI-ProteinID: XP_004342326
UniProt: L8H6X7
LinkDB
Position
Unknown
AA seq 151 aa
MLYPKEDKENKVLLYACRNCEHVEQADLKQIDKDGYEVQTGAAWRIYRNEITQKPAGGAQ
IFHEVITDPTLPRTKGALCEQCGGREAVFFQANSGNSEQVFTLFFSPVIYSKNEKESACA
CAVVCVNKAGERVRAGECNAILFLHSFLSLV
NT seq 456 nt   +upstreamnt  +downstreamnt
atgctgtacccgaaggaggacaaagagaacaaggtcctcctgtacgcctgccgtaactgc
gaacatgtcgagcaggccgatctcaaacagatagataaggacggctatgaggtccagacc
ggtgccgcctggcgaatctaccgaaacgagatcacccaaaagcctgctggcggtgctcag
atcttccacgaggtgattacggacccaacgctgccacgcacgaagggtgctctgtgcgag
cagtgcggcggaagggaggccgtgttcttccaggccaacagcggtaacagtgagcaggtg
ttcacgctattcttcagccccgtcatctacagcaagaacgaaaaggaaagtgcgtgtgcg
tgtgcggtggtgtgtgtaaacaaagcgggtgaacgagtgcgtgctggtgaatgcaatgct
attctattccttcattccttcctttccttggtttag

DBGET integrated database retrieval system