Acanthamoeba castellanii: ACA1_155210
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Entry
ACA1_155210 CDS
T02667
Name
(RefSeq) premRNA cleavage complex subunit
KO
K14399
polyribonucleotide 5'-hydroxyl-kinase [EC:
2.7.1.78
]
Organism
acan
Acanthamoeba castellanii
Pathway
acan03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
acan00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
ACA1_155210
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
acan03019
]
ACA1_155210
Enzymes [BR:
acan01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.1 Phosphotransferases with an alcohol group as acceptor
2.7.1.78 polynucleotide 5'-hydroxyl-kinase
ACA1_155210
Messenger RNA biogenesis [BR:
acan03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor IIm (CFIIm)
ACA1_155210
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CLP1_P
Clp1
CLP1_N
MMR_HSR1
CbiA
TniB
AAA_16
Sigma54_activat
ParA
nSTAND3
Motif
Other DBs
NCBI-GeneID:
14919313
NCBI-ProteinID:
XP_004340614
UniProt:
L8H014
LinkDB
All DBs
Position
Unknown
AA seq
427 aa
AA seq
DB search
MNAPQQTQEMESVRSWHLMRQEELRIEVDKDMTDGTGEIFGTELAKDRAYTFTRCKFALF
SWHGCTIEVTGQCHAYVGKETPMNAYMNVHGMLEEMRDMAERTDKQGPRVMIVGPTDTGK
SSLSRILASYAARLGRTPTVVDLDVGQGSSVPGMIASLPIEKPVDVSEGYEFATPLVYWY
GDVTPGSNPDLYKLQVSNLLRDINRRMELNQAASVGGLIVNTCGWIDGVGYELIRQAIDA
TRATVVLVLDNERLYSDLQQDLSQVQDRRTQVIKLYKSGGVVTRDPNFRRQVEANANVQT
RVDKIREYFYGPSGDLSPHSTLIDFADISIYRIGGGPRAPSSALPIGAERTITPTKLVEV
QPSQEIVHSIIGVSHAKTPEALLETNLAGFLYITDVNVEKKKLTVLAPCPGPLPSRFVVV
GALKWYE
NT seq
1284 nt
NT seq
+upstream
nt +downstream
nt
atgaacgcgccacagcagacacaggaaatggagagcgtgcgctcgtggcacctcatgcgc
caggaggagctgcgcattgaagtcgacaaagatatgacggacggcacgggcgagatattc
ggcacggagctggcgaaggaccgagcctacacgttcacccggtgcaagttcgccctcttc
tcgtggcacggctgcaccatcgaagtgacgggccagtgccacgcctacgtgggcaaggag
acgcccatgaacgcctacatgaacgtccacggcatgctcgaggagatgcgcgacatggcc
gagcggacggacaagcagggcccgcgggtgatgatcgtcggcccgaccgacaccggcaag
tcgtccctcagccgcatcctcgcatcctacgccgctcggctcgggcgcacacccaccgtc
gtcgacctcgacgtgggccaaggttcttcggtgcctggcatgatcgcctctttgccaatc
gagaagcctgttgacgtgtctgagggctacgagttcgcgacgccgctcgtgtactggtac
ggcgacgtgacgcccggcagcaaccccgacctctacaagctgcaggtcagcaacctcctg
cgagacatcaaccgccgcatggagctcaatcaagcagcatcggtcggtgggctgatcgtg
aacacgtgcgggtggatcgacggcgtcgggtacgaactcatccgacaggccatcgacgcc
accagggcgaccgtcgtcctcgtcctcgacaacgagcgactctactcggacctccagcag
gacctctcccaggtccaggacaggagaacacaggtgatcaagttgtacaaatctggtggc
gtcgtgacccgagatcccaacttcagacgtcaggtggaggctaacgccaatgtgcagacg
cgggtggacaagattagggagtacttctatggacccagcggcgacctgagcccgcactcg
acgctcatcgactttgccgatatctcgatctaccgcatcggcggcggtccgcgcgcgcca
tcgtccgccctgcccatcggcgccgagcgcaccatcacgcccaccaagctggtcgaggtc
cagccctcccaggagatcgtgcactccatcatcggcgtctcgcacgccaagacgcccgag
gccctgctcgaaaccaacctcgcgggcttcctgtacatcacggacgtcaacgtggagaag
aagaagctcaccgtgctggccccttgccccggacctctccccagccgctttgtcgtcgtg
ggcgccctcaagtggtacgagtga
DBGET
integrated database retrieval system