KEGG   Acanthamoeba castellanii: ACA1_291620
Entry
ACA1_291620       CDS       T02667                                 
Name
(RefSeq) DNAdirected RNA polymerase II subunit rpb4, putative
  KO
K03012  DNA-directed RNA polymerase II subunit RPB4
Organism
acan  Acanthamoeba castellanii
Pathway
acan03020  RNA polymerase
acan03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:acan00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    ACA1_291620
  09124 Replication and repair
   03420 Nucleotide excision repair
    ACA1_291620
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:acan03021]
    ACA1_291620
   03400 DNA repair and recombination proteins [BR:acan03400]
    ACA1_291620
Transcription machinery [BR:acan03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol II specific subunits
     ACA1_291620
DNA repair and recombination proteins [BR:acan03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      ACA1_291620
SSDB
Motif
Pfam: RNA_pol_Rpb4 EF-G-binding_N
Other DBs
NCBI-GeneID: 14926404
NCBI-ProteinID: XP_004368109
UniProt: L8HID4
LinkDB
Position
Unknown
AA seq 135 aa
MAAQQEEEDASLLRLGLDFQNANCLLNSEVAILLEHRQQTAAVQEEGEAELSNVFLKTLS
YVQRFSRYKTKAAVKEVRSLLTEKELEEFEIAALSNLCPETAEEAKSLIPSLAKRFDDEE
LQSVLNDLASFRRFE
NT seq 408 nt   +upstreamnt  +downstreamnt
atggccgcacaacaggaggaagaagatgcgtcgctcttgaggctgggacttgatttccaa
aatgcaaactgcttgctcaactcggaggtcgccattcttttggagcatcgacagcagacg
gctgcagtgcaagaggagggagaggccgagctctccaatgtgttcctcaagaccttgtcg
tacgtgcagcggtttagccgctacaagaccaaggctgccgtgaaggaagtgcgcagcctg
ctcacggagaaggagctggaggagttcgagatcgccgcgctcagcaacctgtgcccggag
actgccgaggaggccaagtcactcatcccgtcgctggccaagcgattcgacgacgaggag
ctccagagcgtgctcaatgaccttgcctccttcaggcgattcgaatga

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