Antrostomus carolinensis (chuck-will's-widow): 104524274
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Entry
104524274 CDS
T08541
Symbol
SLC6A4
Name
(RefSeq) sodium-dependent serotonin transporter
KO
K05037
solute carrier family 6 (neurotransmitter transporter, serotonin) member 4
Organism
acar
Antrostomus carolinensis (chuck-will's-widow)
Brite
KEGG Orthology (KO) [BR:
acar00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
acar02000
]
104524274 (SLC6A4)
Transporters [BR:
acar02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
104524274 (SLC6A4)
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
SNF
5HT_transport_N
PRONE
Motif
Other DBs
NCBI-GeneID:
104524274
NCBI-ProteinID:
XP_010165394
LinkDB
All DBs
Position
Unknown
AA seq
670 aa
AA seq
DB search
MEKKATSNETEPLTSKKNVSDCNEGEDCKENGRLVRNPKSALRLVEDGNKVHPSQGDKGE
AAQISNGYSGVQSSVPCNGMGEVEDAQCTAPAATTTTTTTTSTTCGAEGQQQLMELEDRE
TWSKKIDFLLSVIGYAVDLGNVWRFPYICYQNGGGAFLIPYTIMAIFGGIPLFYMELALG
QYHRNGCISIWRKICPIFKGIGFAICIIDLYVASYYNTIMAWAFYYLVSSFTAELPWTSC
TNAWNTGNCTNYFSKDNVSWSLHSISPAEEFYTRQVLQVHKANGLDDLGGISWQLTLCLL
LIFTIVYFSIWKGVKTSGKVVWVTATFPYIILFILLVRGATLPGAWRGVLYYLKPEWQKL
LATEVWVDAAAQIFFSLGPGFGVLLAYASYNKFHNNCYQDALVTSTVNCVTSFVSGFVIF
TVLGYMAEMRNEDVSEVAKDTGPSLLFITYAEAIANMPASTFFAIIFFLMLLTLGLDSTF
AGLEGVITGVLDEYPHVWSKRRELFVLGLTIVCFLGSLATLTFGGAYVVKLFEEYATGPA
VLTVVFLEAVAVAWFYGITQFCNDVKEMLGFTPGWYWRICWAAISPIFLLFVTCSFLSNP
PELRLFDYSYPYWTTVVGYCIGTSSIICIPIYMIYRLIITPGTLKERILKSITPETATEI
PFGDIRMNAV
NT seq
2013 nt
NT seq
+upstream
nt +downstream
nt
atggaaaaaaaggcaacaagcaatgagactgagccgctaacttccaagaaaaatgtgtca
gactgtaatgaaggagaagattgtaaagagaatggacgtctggtcaggaaccctaaatct
gccctacggctggtggaagatggcaataaagtccatcccagccagggagataaaggggag
gcagctcagatctcaaatggttattcaggggttcagagctctgttccctgcaatggaatg
ggagaggtggaagatgcccagtgcactgccccagcagccacaaccaccactacgaccacc
acttctaccacctgtggagcagaaggtcagcagcagctgatggagctggaagacagagag
acctggagtaaaaaaattgactttctactgtctgtcattggatatgcagtggacctggga
aacgtgtggaggtttccttatatatgctatcaaaatggaggaggggcgttcctcattcct
tacacaattatggccatctttggagggattcctctcttctatatggaactagcactagga
cagtaccacaggaatgggtgtatttcaatttggagaaaaatatgccctatattcaaagga
attggctttgccatctgtataatagatctttacgtagcctcctactacaacaccattatg
gcttgggccttttactacctcgtctcctccttcacggcggagctgccatggactagctgc
acaaatgcttggaacacaggcaactgcactaactacttcagcaaggacaatgtcagctgg
tccctgcattccatctctcctgcagaagaattttatacccgccaagttctacaggtgcac
aaggccaatgggctggatgacctcgggggcattagctggcaactgaccctctgtttattg
ttaatcttcaccattgtatacttcagcatctggaaaggggtcaaaacatctggcaaggtg
gtgtgggtgactgccacattcccttacatcatcctttttatcctgctagtgagaggtgca
actttgcctggtgcctggagaggtgtcctctactacctgaaacctgaatggcagaaactc
ctggccactgaggtctgggtggatgcagcagctcagatttttttctcccttggtccaggt
tttggggtcctattggcttatgccagctacaacaaattccataacaactgctaccaagat
gctctggttaccagtaccgtcaactgtgtcactagttttgtgtctggatttgtcattttc
accgtgctggggtacatggctgagatgaggaatgaagatgtatcagaggttgccaaagac
accggacccagccttctcttcatcacatatgctgaggctattgcaaacatgcctgcttcc
actttctttgccatcatctttttcctgatgttactcacgctgggattagacagcacgttt
gcaggactagagggagtgatcactggagtactggatgaatacccacatgtctggagcaaa
cgcagggaactgttcgtccttggtctgaccatcgtttgctttttggggtcattagcaacc
ctgacattcggaggcgcatatgtggtaaagctgtttgaagaatatgccacaggtccagct
gtcctaacagtcgtgttcctggaagcagttgctgtggcctggttctatggtatcacccag
ttttgcaatgatgtgaaagaaatgctaggcttcaccccaggctggtactggcgaatttgc
tgggcagcaattagtcccatcttccttctgtttgtcacttgcagctttctgtccaaccct
cctgagctccggctttttgattatagttatccctactggaccacagtagtgggttattgc
ataggaacctcttctatcatctgtattccaatctacatgatttatcggttgatcatcact
ccaggaacacttaaggagcgtattctgaaaagcattactccagaaacagctacagaaatt
ccttttggagacatccgcatgaacgcagtataa
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