Antrostomus carolinensis (chuck-will's-widow): 104526914
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Entry
104526914 CDS
T08541
Symbol
GRIN1
Name
(RefSeq) LOW QUALITY PROTEIN: glutamate receptor ionotropic, NMDA 1
KO
K05208
glutamate receptor ionotropic, NMDA 1
Organism
acar
Antrostomus carolinensis (chuck-will's-widow)
Pathway
acar04020
Calcium signaling pathway
acar04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
acar00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
104526914 (GRIN1)
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
104526914 (GRIN1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
acar04040
]
104526914 (GRIN1)
Ion channels [BR:
acar04040
]
Ligand-gated channels
Glutamate (ionotropic)
104526914 (GRIN1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Lig_chan
Lig_chan-Glu_bd
ANF_receptor
SBP_bac_3
Peripla_BP_6
DUF6724
Motif
Other DBs
NCBI-GeneID:
104526914
NCBI-ProteinID:
XP_028941413
LinkDB
All DBs
Position
Unknown
AA seq
946 aa
AA seq
DB search
MSIYSDKSIHLSFLRTVPPYSHQANVWFEMMRVFNWNHVILIVSDDHEGRAAQKKLETLL
EERESKSKKRNYENLDQLSYDNKRGPKAEKVLQFDPGTKNVTSLLLEAKELEARVIILSA
SEDDAATVYRSAAMLNMTGSGYVWLVGEREISGNALRYAPDGVIGLQLINGKNESAHISD
AVAVVAQAVHDLFEKENITDPPRGCVGNTNIWKTGPLFKRVLMSSKYSEGVTGRVEFNED
GDRKFANYSIMNLQNRKLVQVGIYNGSHVLTNDRKIIWPGGETEKPQGYQMSTKLKIVTI
HQEPFVYVKPTQADGTCREEFTINGDPVKKVFCTGPNETIPGRPTVALCCYGFCIDLLIR
LAGVMNFTYEVHLVADGKFGTQERVNNSNKKEWNGMMGELLSGQADMIVAPLTINNERAQ
YIEFSKPFKYQGLTILVKKEIPRSTLDSFMQPFQSTLWLLVGLSVHVVAVMLYLLDRFSP
FGRFKVNSEEEEEDALTLSSXXXXXXXXXLNSGIGEGAPRSFSARILGMVWAGFAMIIVA
SYTANLAAFLVLDRPEERITGINDPRLRNPSDKFIYATVKQSSVDIYFRRQVELSTMYRH
MEKHNYESAAEAIQAVRDNKLHAFIWDSAVLEFEASQKCDLVTTGELFFRSGFGIGMRKD
SPWKQNVSLAILKSHENGFMEDLDKTWVRYQECDSRSNAPATLTFENMAGVFMLVAGGIV
AGIFLIFIEIAYKRHKDARRKQMQLAFAAVNVWRKNLQRELRRRSKCIPEHALRTSGIHF
GYPREVAEPDLVTPSPVGKVTLIGTKAIGEESLSAPAAERGRSPRLAAPAPWRLVLPACA
NQDRKSGRAEPDPKKKATFRSITSTLASSFKRRRSSKDTPCRMVPQECQRDRLAPWSQDS
PGKLPPHSERPSAHHHPSCTASPRHIIPTAPGGDACVPHRQLLQLE
NT seq
2841 nt
NT seq
+upstream
nt +downstream
nt
atgtctatatattctgataagagcatccacctgtcctttttgcgcacagtcccaccatac
tctcaccaggccaacgtctggtttgagatgatgagagtcttcaactggaatcacgtcatt
ctgatagtcagtgacgaccacgaaggtcgtgctgcacaaaagaagctggagaccctcttg
gaggagagagagtccaagagtaaaaaaaggaactatgaaaacctcgaccaactttcctat
gacaacaagcgaggacccaaggctgagaaagtgcttcagtttgaccctggaaccaaaaac
gtgacgtcgctgctgctggaggctaaggagctggaggctcgtgtcatcatcctttctgcc
agtgaggatgatgcggccacggtgtacagatcagcagccatgctcaatatgacgggctcc
ggctacgtgtggctggtgggggaacgggagatatcgggcaatgccctgcgttacgcccct
gatggagtcatcggtttgcagctcatcaacgggaagaacgagtcagcccacatcagtgac
gccgtcgcggtggtggcccaggccgtgcacgacttatttgagaaggagaatatcacagac
ccaccacggggctgtgtgggcaacaccaacatctggaagacaggaccccttttcaagagg
gttttgatgtcctccaagtactcagagggtgtcactggacgggtggagttcaacgaggat
ggggacaggaagtttgccaactacagcatcatgaacctgcagaatcggaaactggtccaa
gttggaatttacaatggcagccatgtcttgaccaacgaccgaaagattatctggccaggg
ggagaaactgagaaacctcaaggctatcagatgtcaaccaagttgaagatcgtgacaatc
caccaagaaccctttgtctatgtgaagcccacgcaagcagatgggacgtgtagagaggaa
tttaccatcaatggagatcctgtgaaaaaggtcttttgcactggacccaacgagaccatc
ccaggccgtcccactgtagcactgtgctgctacggcttctgcatcgacctgctcatccgg
ctggcaggggtgatgaacttcacctatgaggttcacctggtggctgatggtaaatttggt
acccaagagcgggttaacaatagcaacaagaaggagtggaatgggatgatgggggagctg
ctgagtggccaagcggacatgattgtggctcctctcactatcaacaacgagcgggcacag
tacatcgagttctccaagcccttcaagtatcagggcctcaccatccttgtgaagaaggaa
atccctcgcagcaccttggactcgttcatgcagcctttccagagcacgctttggctgctg
gtggggctgtctgtgcacgtggtggcagtgatgttgtacctcttagaccgattcagcccg
tttggacggttcaaagtgaacagcgaggaggaggaggaagatgccctgaccctctcctcg
nnnnnnnnnnnnnnnnnnnnnnnnnngctgaactccggcatcggagaaggtgctccccgg
agcttctctgcccgtattcttggcatggtgtgggctggctttgctatgatcatcgtggct
tcatacactgccaacctggcagccttcctggtgttagaccggcctgaggagagaattaca
ggcattaatgaccctcggctgcgcaacccctctgataagttcatctatgccacggtgaag
cagagctcggtggacatctacttccgacggcaggtggagctgagcaccatgtaccgacac
atggagaagcacaactacgagagcgctgccgaagccatccaggcagtgagggacaacaag
ctccacgccttcatctgggactcggcggtgctggagtttgaagcctcccagaaatgtgac
ctggtgacgacgggggaacttttcttccgctccggcttcgggatcgggatgcgcaaggac
agcccgtggaagcagaacgtctccctggccatcctcaagtcccacgagaacggcttcatg
gaggatttggacaagacttgggtgaggtatcaggagtgtgattcccgtagcaatgcccca
gcaacactcacctttgaaaatatggcaggtgtgtttatgctggtggctggaggtattgtt
gccgggatatttttaatattcatagaaatagcttacaaaaggcataaggatgctcggagg
aagcagatgcagctggcgtttgcggccgttaatgtgtggaggaaaaacctgcagagagaa
ctgagaaggaggagcaaatgtatccccgagcatgctctgcgcaccagcgggatacatttt
ggttacccccgtgaggtagcagagccagacctggtcactccgtcccccgtcggaaaagtc
acactcattggcacgaaagcaattggggaggaatcgttgtcagcgcccgccgcagagcgc
ggccggtcccctcggctcgctgcccccgcaccatggcggctggtgctcccagcctgcgct
aaccaggatagaaaaagtggtagagcagaacctgaccctaaaaagaaagccacttttagg
tccatcacctccaccctggcctccagcttcaagagacgtaggtcctccaaggatacgccc
tgcagaatggtccctcaggagtgccagagagacaggctggcaccatggagccaagacagc
cctgggaagctaccaccccactctgaacgtcctagcgcccaccatcacccgagctgcaca
gcctctccgcggcacatcatccccaccgccccaggaggagatgcatgtgttccccatagg
cagctcctgcaactcgaatag
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