Antrostomus carolinensis (chuck-will's-widow): 104529087
Help
Entry
104529087 CDS
T08541
Symbol
POLR1A
Name
(RefSeq) DNA-directed RNA polymerase I subunit RPA1
KO
K02999
DNA-directed RNA polymerase I subunit RPA1 [EC:
2.7.7.6
]
Organism
acar
Antrostomus carolinensis (chuck-will's-widow)
Pathway
acar03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
acar00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
104529087 (POLR1A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
acar03021
]
104529087 (POLR1A)
Enzymes [BR:
acar01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
104529087 (POLR1A)
Transcription machinery [BR:
acar03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
104529087 (POLR1A)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb1_2
RNA_pol_Rpb1_5
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
RNA_pol_Rpb1_1
Pox_C7_F8A
HMG_box
Motif
Other DBs
NCBI-GeneID:
104529087
NCBI-ProteinID:
XP_010171579
LinkDB
All DBs
Position
Unknown
AA seq
1473 aa
AA seq
DB search
MGNPAINGLYDLALGPPDSKEVCATCMQNFTNCPGHFGHIELPLTVYNPLFFDKLYLLIR
GSCLNCHMLTCPRSVVHLLLSQLKVLEKGLLHAVHDLEVIVSRFLEQCADATGSEIEEEL
NRHVQEILQSHQIRDQCSNVKNVCECRNKLIAQFWKAHTSSKKCPNCKSRRSLVRKEHNN
KLTVTYPSTVSRKSGEEGILDEPAAVDESQLGKRGYLTPMTAKEYILALWKNEGFFLRYL
FPGMDPHDGSEFSPDMFFLDLLVVPPSRYRPVNRLGDRLFTNGQTVNLQAVMKDAKMIRK
LLVFMAKEQCEPIKITEEQIQTETGENNESLDHSILTMIPGQTIADKLYNAWIRLQSHVN
IVFDSDMDKLTTEKYPGIRQLLEKKEGLFRKHMMGKRVDFAARSVICPDMYIGTNEIGIP
MVFATKLTYPQPVTPWNVKELRQAVINGPKVHPGASMVINEDGSRTVLSASSLTQREAIA
KQLLTPSSGAPQSGLKIVCRHIKNGDVLLLTRQPTLHRPSIQAHRARILPGEKVLRLHYA
NCKAYNADFDGDEMNAHFPQSELGRAEAYTLAFTDEQYLVPKDGKPLPGLIQDHMISGVS
MTIRGCYFTREQYMELVYRGLTDKKGKIKIFPPAIMKPQRLWTGKQVVSTLLINIIPENQ
IPLNLTGKAKIGGRTWVKGPANRCLNLDSMCESQVIIRNGELLCGVLDKAHFGSSAYGLV
HCCYEIYGGETSGKVLTCLGRLFTAYLQLYRGFTMGIEDILVKPEADHKRKKIIEKSRQR
GIEAVRAALNLPETASCEEVRGKWQDAHLCKDQRDFNMVDMKFKEEVNNYNNEVNKVCMP
LGLHRSFPENNLQLMVQSGAKGSTVNTMQISCLLGQIELEGRRPPLMASGKSLPCFQPYD
FSPSSGGFVTGRFLTGIRPSEFFFHCMAGREGLVDTAVKTSRSGYLQRCIIKHLEGLVVQ
YDLTVRDSDGSVVQFLYGEDGLDIPKTQFLQPEQFPFIAENYEVIQKTNHLDEALSRMES
HQATQHFKAIKKWQARHQNSVQREGGFLMFSQKKMASVKAQIPGGQIKNGRDPATLQLLK
MWYELDEKKRRKYLKKTNKCPDPSLGVWRPDTYFASVSETFENGVEDYINKWESENRQSC
MHQTLSSDRLKDLLYLKWQRSLCDPGEAVGLLAAQSIGEPSTQMTLNTFHFAGRGEMNVT
LGIPRLREILMVASANIKTPMMSVPVFNTKKALKKVKQLKKQLTRVCLAEVLQKVEIEES
LHLKCKQNKHHLYKIKFHFLPHEYYREEKCVKPRQILHFMETRFFKIFLEAIKKKSAKMA
SFTEVSTRKATRKDLDGDQDKTQNEEAPAEEEDNIVDAEADEGDGDATEAKRRKNQEEEV
DYESEEENGDENVDENLEGEEAESENEEKAPIAEEDQNGADGDESQHLSFMSQTKKEKDR
LLRSAELRVNAVLDSHPSIQDYTFDTESELWCE
NT seq
4419 nt
NT seq
+upstream
nt +downstream
nt
atggggaatccagccattaatggactgtatgacttggctttgggacctccagactccaaa
gaagtgtgtgcaacttgcatgcagaacttcaccaactgccctggtcattttggccacata
gagctgcctctgactgtctacaaccccctgttttttgataaattataccttctaattcga
ggttcttgtttaaattgtcacatgctgacatgtcctcggtctgtggttcacttactgcta
agtcagctgaaggttctggagaaagggttgctccatgccgtccacgatcttgaagtcatt
gtgagcaggtttttagagcaatgtgcagatgcaacaggttcggaaattgaagaagagtta
aatcgccatgttcaggaaatattgcaaagtcatcaaataagagatcagtgttccaatgta
aaaaatgtgtgtgagtgtagaaataaactgatagcacagttctggaaagcacatacgagt
tcaaagaaatgcccaaactgcaaatctaggagatcactagtgagaaaagagcacaacaac
aaactgacagtcacctatccttctacagtgtcccgtaagtcaggagaggaaggaattctg
gatgagccagcagctgttgatgaaagccagttagggaagagaggatacctgacaccgatg
actgccaaggaatacatcctggctctgtggaagaatgaaggtttctttttgcggtatctc
ttccctgggatggatccccatgacggttcggaattcagtccagacatgttttttttagat
ctacttgtggttccaccttcaaggtatcgtcccgtaaatcgtcttggagaccgactgttt
acaaatggtcagactgtgaacttgcaggctgtcatgaaagatgccaaaatgatacggaag
ctcttggttttcatggcaaaagaacaatgtgagccaataaaaattacagaagaacaaatc
caaacagagacaggagagaataatgaatctctggaccattctatcctgacaatgattcca
ggacagaccattgcagataagctgtacaatgcttggattcgtcttcagagccatgtcaac
attgtgtttgatagtgacatggacaaactaacgacagaaaaataccccggtatccgtcag
ctattagagaaaaaggaagggctgttccgcaagcacatgatgggaaagcgtgtggatttt
gctgctcgatcagtcatttgccctgatatgtacattggtaccaatgaaattggcattccc
atggtatttgctactaaactgacttaccctcagccagtcactccctggaatgtcaaagag
ctgaggcaggctgtcataaatggccccaaggttcaccctggggcctccatggtcattaat
gaagatggatctcggaccgtgttgagcgcgagcagcctgacccagagggaagccatagcc
aagcagctgctcactccttcttcaggcgcaccccagtcaggactaaagattgtatgtcga
cacattaaaaacggagatgtccttttgctgacccgccagcccactcttcacagaccctcc
atccaagctcaccgggcccggatcctgcctggagaaaaagtgctgaggcttcactacgcc
aactgcaaggcttacaacgcggattttgacggtgatgaaatgaacgcccattttccacag
agcgagctgggtagagcagaagcctacaccttggcctttactgatgaacagtatctggtt
ccaaaggatgggaagccacttcctggcttaatccaggatcacatgatttctggagtcagc
atgacaatccggggctgctatttcaccagagagcaatatatggagcttgtttaccgaggg
ctgacagacaaaaaaggaaaaattaaaatctttcctcctgccattatgaaaccacagcga
ttatggacaggaaagcaggttgtttctacattgttaataaacatcattccagaaaaccaa
atcccactgaatttgactgggaaagctaagattggtggaagaacttgggtaaagggacct
gcaaacagatgtctaaaccttgactcaatgtgtgaatctcaggttattattagaaatggg
gaattactgtgtggagtcttggacaaagctcactttggcagctctgcctatggcctggtc
cactgttgctatgaaatctacgggggtgaaacgagtgggaaagtgctaacgtgtctagga
cgcctctttactgcttatctgcagctgtacaggggatttacaatggggattgaagatatt
ttggtcaaacctgaagcagaccacaaaagaaaaaaaatcattgaaaagtcaaggcagcgt
ggtattgaagctgttagagctgctcttaatttgccagaaacggcatcgtgcgaggaggtc
cgagggaaatggcaggatgcccatctctgcaaagaccagagggatttcaacatggtcgat
atgaaattcaaggaggaagtaaacaattacaacaatgaagttaacaaggtttgtatgcca
cttggtctccacaggagctttccagagaacaatttgcagttgatggtccagtcaggagcc
aaaggatccactgtaaatacaatgcagatttcttgtttactgggccagattgagttggaa
ggtcgaagacccccactgatggcatctggcaaatcgctgccatgtttccagccttacgat
ttttcccctagctcaggaggatttgtgactggcagatttctcactgggatcagaccttct
gaattcttctttcactgcatggctggcagggaaggtctggtggacacagctgtcaaaacc
agccgttctggatacctacaaagatgtatcataaaacatttggaaggactggtagttcag
tatgacctgactgtacgcgatagcgatggcagtgtggtgcagtttctgtatggagaagat
gggcttgatatccctaaaactcagttcttacaacctgagcagtttcctttcattgcagaa
aactatgaggtaatccagaagacaaaccatctggatgaagctttatcaaggatggagtct
caccaagctacccagcatttcaaagccatcaaaaagtggcaagccaggcaccaaaactct
gtgcaaagagagggaggttttctgatgttttcccaaaagaaaatggcaagtgtaaaagca
cagattccaggaggacagattaaaaatggaagagatcctgctactttacagttattgaag
atgtggtatgaactagatgagaagaaacgaaggaagtatctgaagaagacaaataagtgc
cctgacccaagccttggtgtttggcgtccagatacttattttgcatctgtttcagaaaca
tttgaaaatggagttgaagattatatcaacaaatgggaatctgagaacagacaaagttgt
atgcaccaaacactttcttctgacagattaaaggatttgttgtacttaaagtggcagcga
tcactttgtgacccaggagaagctgtgggtcttcttgcagctcagagtattggggaacct
tccacacagatgaccctgaacaccttccactttgctggcagaggtgaaatgaatgtcaca
ttgggtattccaaggttgcgggaaatactgatggtggccagtgcaaatattaaaacacca
atgatgagtgttcctgtgttcaataccaagaaagctctcaagaaggtgaaacagcttaag
aaacagctcacaagagtgtgcttagctgaggtcttgcagaaagttgagatagaggaatcc
ttgcatctgaagtgcaagcagaacaaacatcacctctacaaaatcaaattccatttctta
ccccacgagtattaccgagaggagaagtgtgtgaagcccaggcagatcttgcacttcatg
gaaacaaggttctttaaaatttttctggaagcaattaaaaagaagagtgcaaagatggca
tcttttactgaagtcagcacccggaaggcaactcggaaagatttagatggtgaccaagac
aagacacagaatgaggaagctccagcagaggaagaagataatattgttgatgcagaggct
gatgaaggggatggcgatgctacagaagcaaaacggaggaagaaccaggaagaagaggtt
gattatgaaagtgaagaagaaaatggggacgaaaacgttgatgagaatctagaaggtgaa
gaggctgaatcggaaaatgaagaaaaggctcccattgctgaagaagatcagaatggagca
gatggtgacgagtctcaacatctttcctttatgtctcaaactaaaaaagagaaagatcga
ttacttcggtcagcagagttgcgagtaaatgctgttctggacagccacccatcgatacag
gattacacctttgacaccgaaagtgaactgtggtgtgag
DBGET
integrated database retrieval system
