Antrostomus carolinensis (chuck-will's-widow): 104530279
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Entry
104530279 CDS
T08541
Symbol
BRIP1
Name
(RefSeq) Fanconi anemia group J protein
KO
K15362
fanconi anemia group J protein [EC:
5.6.2.3
]
Organism
acar
Antrostomus carolinensis (chuck-will's-widow)
Pathway
acar03440
Homologous recombination
acar03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
acar00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
104530279 (BRIP1)
03460 Fanconi anemia pathway
104530279 (BRIP1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
acar03400
]
104530279 (BRIP1)
Enzymes [BR:
acar01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
104530279 (BRIP1)
DNA repair and recombination proteins [BR:
acar03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-B complex
104530279 (BRIP1)
FA (Fanconi anemia) pathway
Downstream FA components
104530279 (BRIP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD_2
Helicase_C_2
DEAD
ResIII
Motif
Other DBs
NCBI-GeneID:
104530279
NCBI-ProteinID:
XP_028942527
LinkDB
All DBs
Position
Unknown
AA seq
1386 aa
AA seq
DB search
MSSDTSEYTIGGVKIIFPCKAYPSQLAMMNAIVKGLNNRQHCLLESPTGSGKSLALLCSA
LSWQQSLYEKLLLPSSGEQEDRKPEPSPACHCMCHSQLKSDEAATSVNHGAAASFNDNET
GSSIQPGSPLKNTECKENETLASKLSAKKRLSLCDGENDDFQVDRKRIRRLETEQQVRKR
HCFAKGVQFIDALEVYNQRKNGELIVHSEKSVKTTTFSPKTSSGPCTECSCSSGKETNKD
SSNTKKKENGDRPFIPKIFFGTRTHKQISQITRELKRTAYSNVPMTILSSRDYTCIHPVV
SNSGSNRNEMCVELLEGKHGKSCLYYHGVHKLSEHHALQSAHGMYQAWDIEDLVSLGKKL
RACAYFAARELMVGADIVFCPYNYLLDPQIRESMEINLKGQVVILDEAHNIEDCARESVS
YGVTESQLIAAREELDFMVNNNIRQKDHEALRGVCCSLTNWLRESSGQLVERGYETSCKV
WSGKEMITILHKMGITDIAFPILQKQLAAILEKEEKVSVLGREELIEIPVVSPATQIVLK
GLFMVLLCLFKDKSRYADDYRVALQQTYAWMNENQLDVSDSSALFTRPKHKRNLRQKTVV
HMLNFWCLNPAVAFSDLSDVRTIVLTSGTLSPMDSFSSELGVKFSIQLEANHVIRNSQVW
VGTIGAGPSGRKLCATFQHTETFEFQDEVGALLLSVCQTVGQGILCFLPSYKLLDKLKDR
WMHTGLWRNLELVKTVIAEPQGGAKSDFDELLKIYYDAIKCKGEKDGALLIAVCRGKVSE
GLDFCDENARAVITIGIPFPNVKDLQVELKRKYNDQHKNTRGLLPGSQWYEIQAYRALNQ
ALGRCIRHRNDWGALILVDDRFRNNPNKYITGLSKWIRQQIQHHENFGSALESLQAFARR
NQKGIDCSPECSTESLHVPSNSKDLSQASQGEATLHLSPDVAAKSEEQNLVSEINFTTTI
SLTGNPTASNQPSNTTATIKQSGQKVDVKGHSHHVSQRRKHMDSTPKLPVTKIEREEKNG
WTNSDIKKEHCCIKPLTSTPLPVAKNCMSTASSKQKNMNRTNELIDSVNQCQTSLISEHK
PGVPESCLEMTNFSVKNTEAPVAEGRPDELRPQAELFFSAGGKSEFSMFNVSAEAEDEDE
SIYFTPELYDDVESEEQKTRPLVSACDTNENWIECGNSTVTDDLFGINTSETLSVTKKKI
VDDGRSTSLHGIMQNEGIKNSAVNNVEKSSEIEAEQIAPQEMDTKKWKISLSRSHNKGLK
VQRQCRRRKATVRQSGSTCERKKKTHHQPCKKGLYCIGCGAEILPKAEGILRKACYSNIE
LKIIWKLFRNTNVRSKVPINNCNCELDATSENDNMMLIISDAASLSHLKETLKVYQMPVK
SEGKSY
NT seq
4161 nt
NT seq
+upstream
nt +downstream
nt
atgtcttctgacacatcagaatatactattgggggtgtgaagatcatattcccttgcaag
gcttacccttcccaacttgccatgatgaatgctattgttaagggcttaaataataggcaa
cactgtttgttggagagccctacaggaagtggcaaaagcttggcgttgctttgttctgca
ttatcatggcagcagtctctgtatgagaaactgctgcttccatcatctggtgaacaggaa
gacagaaagccagagccctcaccagcgtgtcactgcatgtgtcattcccaattgaagagt
gacgaggctgcaacaagtgtgaatcatggtgctgctgcttcttttaatgataatgaaaca
ggaagttccatacaacctggaagcccgctaaaaaacacagaatgtaaggaaaatgaaacg
ctagcttcgaaattgtctgccaaaaagaggttatctctgtgtgacggtgagaatgatgat
tttcaagtagacagaaaaaggattcgtcgtttagaaactgagcagcaggtcagaaaacgt
cattgttttgcaaaaggagtgcagtttattgatgctttagaagtttataatcagagaaaa
aatggagagctgattgttcactcggaaaaaagtgtgaaaaccactactttttctcccaaa
acatcttctggtccttgcactgaatgttcctgttcttctggaaaagaaactaataaagat
tctagtaacacaaagaagaaagaaaatggagaccgaccattcattcccaaaatatttttt
ggaacacgaacacacaagcaaatatcccagattaccagagaattgaagagaacagcatat
tccaatgtccccatgacaattctttctagccgggattatacctgtattcatccagtggta
tctaatagtggtagtaacaggaacgaaatgtgtgtagaattgctggaaggaaaacatggt
aaatcctgtctttactatcatggtgttcataaactcagtgaacaccatgccctacagtct
gcacatgggatgtatcaggcttgggacattgaagatctagtgagcctgggaaagaagctt
cgtgcctgtgcatattttgcagccagagaactcatggtgggcgcagatattgtattttgt
ccatataattatctcctagacccgcagatacgggagagtatggagattaacctaaaaggc
caagtagtcattttagatgaagcccataatattgaggactgtgctcgggagtctgtgagc
tatggtgttacagaaagtcaactaattgctgctcgagaagagctggatttcatggtcaat
aacaacatcaggcagaaggatcatgaggccttacggggtgtgtgctgctctttgacaaac
tggttacgagagagctctggtcaactagtagaaagagggtatgaaacttcctgtaaggtt
tggagtggaaaagaaatgatcaccattttgcacaaaatgggaataactgatattgctttt
cccattttacagaaacaacttgctgctatcctggaaaaagaagaaaaagtatcagtgctt
ggtagagaggaacttattgagataccagttgtgagccctgccactcagattgtgctgaaa
gggttattcatggttcttttatgtctttttaaagataagagcaggtatgcagatgactac
agagttgccttacaacaaacttatgcttggatgaatgaaaaccaacttgatgtttcagat
tcgagtgccttgtttacacgacccaagcacaagaggaacttgcggcagaaaactgtggtc
cacatgcttaatttttggtgcttgaatcctgctgtggctttttcagacttaagtgatgtt
agaacaattgttctgacatctggtacgctctctccgatggattcattttcttcagagctt
ggtgtgaaattttctattcagttggaggcaaatcacgttattcggaactcacaggtttgg
gttggcaccattggagcaggtcctagtggtcggaagttgtgtgccacattccagcataca
gagacctttgagttccaagatgaggtgggagcacttctcctttcagtgtgtcaaactgtc
ggccaaggaattttgtgctttttgccatcctataagctgttggacaaattaaaagatcgc
tggatgcacactggcttatggagaaacctggagctggtcaagacagtcattgcagagcct
caaggaggggcaaagagtgactttgatgaactgctgaaaatatactatgatgcaataaaa
tgtaaaggagagaaggatggagcgctccttatagctgtatgcagaggaaaagttagtgaa
ggcttggatttctgtgatgagaatgcccgtgcagttataaccatagggattccgtttcca
aatgtgaaagatcttcaggttgaattaaagaggaaatacaatgaccagcacaaaaataca
agaggccttttaccagggagtcagtggtatgaaattcaagcttacagggctctgaaccaa
gccctgggaaggtgtataagacataggaatgactggggtgctcttattttagttgatgac
cgcttccggaataaccctaataagtacataactggattatctaaatggattcgtcaacaa
atccagcaccatgaaaattttggtagcgcacttgaatccttgcaagcatttgctagaaga
aaccaaaaagggattgattgttcaccagagtgcagcactgaatctctccatgtaccttca
aattcaaaagacctgtcacaagcctctcaaggggaggcaactcttcatctgtcaccagat
gttgctgctaaaagtgaggagcaaaatttggtttcagaaattaactttactacaaccatc
agcttgactggcaatcctacagcatcaaatcagccaagtaacaccacagcaacaattaaa
caaagtggccagaaagttgatgtaaagggtcattctcaccatgtatcacaaagaagaaaa
catatggactccacacccaaactgccagtgactaaaatagagagagaagaaaagaatggt
tggactaattctgatattaagaaagaacattgctgcattaaaccactgacttcaacacct
ttgcctgtggccaagaactgcatgtccacagccagtagcaaacaaaagaacatgaatagg
actaacgaacttattgatagtgtaaatcaatgccagacatcattaatttcagaacataaa
ccaggcgtaccagaatcgtgtttagaaatgactaatttttcagttaaaaatactgaggct
ccagttgctgaagggcgtcctgatgagctccgccctcaggctgagctttttttttcagca
ggagggaaatctgaattttcaatgttcaatgtatctgcagaagctgaagatgaggatgag
agtatctacttcacaccagaactctatgatgatgtagaatcagaggagcagaaaaccaga
ccactggtttcagcctgtgatacaaatgagaattggattgaatgtggaaactccacagtc
actgatgatctttttggaatcaacacctcagaaacactaagtgtgactaaaaaaaagatt
gttgatgatggcagaagcacaagcttacatggaataatgcaaaatgaggggattaagaat
agtgcagttaataatgtagagaaaagtagtgaaatagaagcagagcagatagcacctcaa
gagatggacaccaaaaaatggaaaatcagtctttccagatcacacaataaaggtttgaaa
gttcagagacaatgcagacgaagaaaagcaacagttaggcaaagtggctccacctgtgaa
agaaagaagaaaacacaccaccagccttgcaagaagggactttattgtattggctgtgga
gctgaaatactgccaaaagcagagggaattttgagaaaagcttgctacagtaatattgaa
ctgaaaataatctggaaactcttcagaaacactaatgtaagaagtaaagtacccattaat
aattgtaattgtgaactagatgccacttcagaaaatgataatatgatgttgatcatctca
gatgctgcaagtcttagtcatcttaaagaaactctaaaggtgtatcagatgccagtgaaa
agtgaaggtaaatcttactga
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integrated database retrieval system
