Atta cephalotes (leaf cutting ant): 105625049
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Entry
105625049 CDS
T04923
Name
(RefSeq) DNA-directed RNA polymerase I subunit RPA1
KO
K02999
DNA-directed RNA polymerase I subunit RPA1 [EC:
2.7.7.6
]
Organism
acep
Atta cephalotes (leaf cutting ant)
Pathway
acep03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
acep00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
105625049
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
acep03021
]
105625049
Enzymes [BR:
acep01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
105625049
Transcription machinery [BR:
acep03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
105625049
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_1
RNA_pol_Rpb1_4
Motif
Other DBs
NCBI-GeneID:
105625049
NCBI-ProteinID:
XP_012061782
UniProt:
A0A158NW74
LinkDB
All DBs
Position
Unknown
AA seq
1704 aa
AA seq
DB search
MTSKYHHKQRLTPKHQDSLRLIFSVFTANDIRNLSVTKIITSLSFNILGHPLKGGLYDPS
LGTMKNSSELCSTCGHNSSKCPGHFGHIELPVPVVNPLFHKALSMLLKLSCLSCFTLQVP
SYIKLLLSAKLKLLYQGQLNDLDGLDHEVTSILSNIEKEEERTEYIRNVINTYMQNFFNR
NRYSQIMPQNPENQANIKSVIMQWHAYIENILKQYVRTNKAGICMNCHDGLPKMSTLQNK
IMISNKEIVKNSKEMLSCEVAHKLEMIMIMPDQSKKYLRQLWHNEKDFLKIIVPCLELVD
IEYPTDIFFFEVIPVLPPIVRPVNFLNSQMVEHPQTHIYKSIIQDCLVLRNVIQTIQDGG
IDHLPQEGRLVFEQIKGITAVEKLHNAWQTLQSNVNHLMDRDMNKSSESINGQGLKQILE
KKEGIIRMHMMGKRVNFAARTVITPDPNLNIDEIGIPEAFARKLTYPTSVTPWNVIELRR
LVLNGPDVHPGAVMVENEDGSIQAISRNDCTQREAIAKRLLTTSDRTNEFIGVKIVHRHL
QNSDILLINRQPTLHKPSIMAHKARVLKGEKTLHLHYANCKAYNADFDGDELNAHFPQNE
LARSESYNIANVSNQYLVPKDGTPLSGLIQDYMVSGVRLTTRGRFFSKAHYTQLVYTALP
IMQKDIILLPPTIIKPKILWSGKQILSTVIINIIPSHKTRINLVSSTKICAKEWQTGISR
RWKCGTEFKNSMIMSEAEVIIRHGELLCGVLDKMHYGATPYGLIHCIYELYGAICANEML
SAFGRLFQMFLQCDGFTLGVEDILITSEINEKRKEIISNCRKIGETVQKSIIKASNDKPM
NEIQAKMEESYWNNSKFRAQVDHKYKSTLDIYTNDINNVCLLTGLFKKFPNNNLQLMVQS
GAKGSTVNTMQISCLLGQSELEGKRPPLMISGKSLSSFPAYDPTPRAGGFIDGRFMTGIK
PQECFFHCMAGREGLIDTAVKTSRSGYLQRCLVKHLEGLIVSYDATVRDYDGSLIQFYYG
EDGLDVPGSCFLTKDQIAFLVDNKESIMDAKLLEYLKRNDKEIAKTIKKIKKWKSKNGSS
LEKRRINEFSKFSMENSNPNDVKQKIIDNHSGRSKAALSLMRKWIRAEKELKESYRSQCT
RCPDPIMSKYRQDIEFGVLSERIESLMDEYLSRPTKIKKSVLRDLLSIKVMKTICPPGEP
VGLLAAQSIGEPSTQMTLNTFHFAGRGEMNVTLGIPRLREILMIASKNIKTPSMEIPFQD
NLENLEKQAKKLKLKLTKCVLRDVLKDIIISRRMEGSPHRRLVHTLRIKYLSHKYYKEEF
TVHPRDVIKCTEEQFFKNIFKEIKKFATISKVFLKLHFEGEKRRINDEDAVIDEIDPDEV
VPENPGSRTRMDLGEMHESSDEEEAAEDADATMTKSLLRHRENQEYEDPEEEEQEETEDI
ILNDKEEEADDNNNANRVLEDKDDDDDTNKKLLNHKRKNNNNKSTSGKDRVLDMYENAMD
YEYDENKLSWCKFTFWLPLKTIKLDLPTIIKNAANKTVLWETKCIKKAFTFQNSKGETIL
KTDGLNIGEMFKYDKILDLNRLYSNDIYNISQTYGIEAANRVIVREIKDVFKMYGITVDV
RHLSLIADYMTFDGTFKPLSRKGMENSASPLQQISFESSLGFLKTATLQGKKDDILSPSS
RLMLGQPCKSGTGAFSILPSLYNM
NT seq
5115 nt
NT seq
+upstream
nt +downstream
nt
atgactagtaaatatcaccataaacaacgtttaacaccaaaacatcaagattccctacgt
ttaatattctcagttttcactgcaaacgatataaggaacttgagtgtaacgaaaatcata
acatcattatcttttaacattcttggacatccattaaagggtggattatacgatccatct
ttaggcacaatgaaaaacagttcggagttatgcagcacatgtggacataatagttccaag
tgtccaggtcattttggtcatatagaattaccagtacctgttgtcaatccattattccac
aaagcattgtctatgttgcttaaattgtcatgtttaagttgctttacattacaagtacca
tcgtatatcaagttattgctgtccgcaaaattaaaattactgtaccaaggacaactcaac
gatcttgatggtttagatcacgaagtaacgtccatattatcaaatattgaaaaagaagaa
gaacgaacagagtatattcgtaatgtaattaatacttatatgcaaaatttcttcaataga
aatagatacagccaaatcatgcctcagaatcctgaaaatcaagctaatataaagagtgtc
attatgcaatggcatgcatatattgaaaatatacttaaacaatatgtgagaaccaataaa
gctgggatatgcatgaattgtcacgatggtcttccaaaaatgtcaacgttgcaaaacaag
ataatgataagtaacaaggaaattgtgaagaattctaaagaaatgctctcgtgcgaagta
gcgcacaaattggaaatgattatgattatgccagatcaatccaagaaatacctacgacaa
ttatggcataacgaaaaagattttcttaaaataattgtaccttgcttagaattagtagat
atcgaatatcctactgatatattctttttcgaggtgatacctgtactaccaccgatcgtg
cgaccggtaaattttcttaatagtcaaatggtcgaacatcctcaaactcatatctataag
agcattatacaggattgtttagtcttaagaaatgttatacaaactatccaagatggaggt
attgatcacttacctcaggaaggtcgacttgtctttgaacaaataaaaggaattacagca
gttgaaaagttgcacaacgcttggcaaacgttacaaagcaatgtgaatcacttgatggat
cgcgatatgaacaaatcatcagagtccatcaatggtcaaggcttgaaacaaattcttgaa
aaaaaagaaggtatcattagaatgcatatgatgggtaaaagagtgaattttgccgcacgt
acagttattactccagatcctaatttaaatatcgatgaaattggcattcctgaggctttt
gcccgcaaattaacatatcctacatctgtaacaccgtggaatgttattgaattgaggcga
ttagttttaaacggtcccgatgttcatcctggcgcagttatggtggaaaatgaagacgga
tcgatacaagctattagtcgtaacgattgtacgcagagggaagctatcgcgaaacgtctc
ttaacaacgagcgacagaaccaacgaatttattggtgtaaaaatagtacatcgacatctt
caaaatagcgatatattgctaataaatagacaaccgacattacataaaccgagtataatg
gctcacaaagcgcgtgttctcaagggagaaaaaactttacatcttcattatgcgaattgt
aaagcatacaacgcggacttcgatggagatgagcttaacgctcatttcccacaaaatgaa
ttggctagaagcgaaagttataacatagctaatgtatccaaccaatacctcgtgccaaaa
gatgggactccattgagtggccttatacaagattacatggtgtctggagtacgactaact
actagaggtagatttttttcaaaggcgcattacacgcaattagtttatacagcattgcca
ataatgcaaaaggacataattcttttaccgccaactattattaaaccgaaaatattatgg
tcgggtaaacaaatcctttcaacagtcattattaatattattccctcgcataaaacacga
atcaatttggtctctagtacgaaaatttgtgcgaaagaatggcaaacagggatatcacga
cgttggaaatgtggaacagaatttaaaaattcgatgatcatgtcggaagcagaagttata
attcgacacggagaattattgtgtggagtactcgataaaatgcattacggtgcgactcct
tacggtcttattcattgtatttacgaattatatggggcaatatgcgcgaatgaaatgtta
agcgcgtttggtagattattccaaatgtttttacagtgcgacggttttactctcggtgtt
gaggacattctaatcacttcagaaatcaatgaaaaacgtaaagaaatcatttccaattgt
agaaaaataggggaaactgtacaaaaatctataataaaagcatctaatgataaacctatg
aacgaaattcaagctaaaatggaagaatcttactggaataattcaaaatttcgcgcgcaa
gttgatcacaaatataagagcactttagacatttatactaatgacattaacaatgtttgt
ctgctgacgggacttttcaagaagttcccaaataataatttacagctcatggtgcaatct
ggtgcaaagggatctacggttaatactatgcaaatatcatgtttgctcggtcaaagtgaa
ttggaaggtaaaagaccaccgttaatgatcagcggaaaaagtttatcaagttttccagct
tacgatccaacacctagagcaggtggttttatcgatggcagatttatgactggaatcaaa
ccccaggaatgttttttccattgtatggcgggacgcgaaggtcttattgatactgccgta
aaaactagtaggtctggttatttacagagatgtttagttaaacatctagaaggtttgatt
gttagttacgatgcgacggttagagactatgacggtagcttaattcagttttattatgga
gaggatggtctcgatgtaccgggttcatgttttctaacgaaggaccaaatcgcatttcta
gttgataataaagagtctattatggatgcaaagttattggaatatctgaaaagaaatgac
aaagagattgcgaaaacgataaaaaagatcaaaaaatggaaaagcaagaatggttcctca
ttggaaaagaggaggatcaatgagtttagtaaattctctatggagaattccaatccgaat
gatgtaaaacaaaaaatcattgataatcatagtgggagaagcaaagccgcattatcgctt
atgagaaagtggataagagcagaaaaggaactgaaagagtcatatcgttcacaatgtact
agatgtcccgatccaataatgtcaaaatacaggcaagatattgaatttggagtattatct
gaacggatagaaagcttaatggatgaatacctttctcgtccgacaaaaattaaaaagtct
gttttgagagatttattatccatcaaagttatgaaaacaatttgtccgcctggtgaacca
gttggtttattagcagcacaatctataggtgaaccatctactcaaatgactttgaatacc
ttccattttgcaggacgtggagagatgaacgtgaccttaggtattccaagattacgtgaa
atcttaatgatagcatcgaaaaacataaaaactccaagtatggaaataccattccaagat
aatttggaaaatcttgaaaaacaggcgaagaaactgaagttaaaattaacaaaatgcgtt
ctacgcgatgtattaaaagacataataataagcagacgaatggagggaagcccacaccga
agattggtgcacactttaagaatcaaatatctttctcataaatactataaagaagagttt
accgttcatccgcgggatgtgattaaatgtactgaagaacaatttttcaagaatatattc
aaggaaattaaaaaatttgccactatttccaaagtttttttaaagttacatttcgaagga
gaaaaaagacgaataaacgacgaggacgcagtaatagatgaaattgatcctgatgaagtt
gtaccggaaaatcctggaagcagaacacggatggatttaggagagatgcacgagtcatcc
gatgaggaggaagccgcggaagatgccgatgctacaatgactaaatcattattgcgtcat
cgagagaatcaagaatatgaagatcctgaagaagaagaacaagaagaaactgaagatatt
atattaaatgataaggaagaagaggcagatgataataataatgcaaatagagttctcgag
gataaggatgatgatgacgatactaataagaaattattaaatcataaaagaaagaataac
aataacaaatctaccagcgggaaggatcgtgtcttggatatgtatgaaaatgctatggat
tatgaatatgacgagaataaactatcatggtgtaaattcaccttttggttaccgcttaaa
acaatcaaattggatttgccaacaataattaagaatgctgcgaataaaactgtcttatgg
gaaacaaaatgtattaagaaagcttttacatttcaaaacagtaaaggcgaaacaattctc
aaaacagatggtctaaatataggggaaatgttcaaatatgataaaatacttgatttaaac
agattatattctaacgatatttataatatttctcaaacatatggaattgaagccgcaaat
cgagttattgtaagagaaattaaagatgtcttcaagatgtatggcatcaccgttgatgta
agacatctgtccttaatcgcagattatatgactttcgatggtacgttcaaaccactcagt
cgaaaaggaatggagaattctgcttcaccattacagcaaataagtttcgaaagttcgcta
ggctttttgaaaacggcgacattgcaaggaaaaaaggatgatatattatcaccttcgagt
agattgatgttaggacaaccgtgcaaatctggaactggggcattttctattttaccatca
ttgtacaacatgtaa
DBGET
integrated database retrieval system
