Aciduliprofundum sp. MAR08-339: AciM339_0481
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Entry
AciM339_0481 CDS
T02396
Name
(GenBank) DNA-directed RNA polymerase subunit E'
KO
K03049
DNA-directed RNA polymerase subunit E' [EC:
2.7.7.6
]
Organism
acf
Aciduliprofundum sp. MAR08-339
Pathway
acf03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
acf00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
AciM339_0481
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
acf03021
]
AciM339_0481
Enzymes [BR:
acf01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
AciM339_0481
Transcription machinery [BR:
acf03021
]
Prokaryotic type
Archaeal type
RNA polymerase
Core subunits
AciM339_0481
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
S1
SHS2_Rpb7-N
Motif
Other DBs
NCBI-ProteinID:
AGB04369
LinkDB
All DBs
Position
419916..420506
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AA seq
196 aa
AA seq
DB search
MYLIVEQEDVIRIPPPMLGEDLDRVVEDLAREKIEGNVYSFPREEVSDPAERKYIIVLIL
SLEKVGEGIIVPGDGAVYQKVRFKALAFHPELQEVVIGDVVDVLKFGAFVRFGPIDGLLH
ISQIMDDVIDVDLDNKRFVGKESKRNLKVKDKVLARVVALSINDANPRQSKIGLTMRQPG
LGKLEWIEEQVREGKK
NT seq
591 nt
NT seq
+upstream
nt +downstream
nt
atgtatttaatcgttgagcaggaagatgttatacgcattcctccacccatgctgggagag
gacctcgatagggtggtggaggatctggcaagggagaagatagagggcaatgtttactca
tttccacgtgaagaggtatccgatcctgcggagagaaagtacatcatagtgctaatttta
tcacttgaaaaggtgggcgagggcataatagttcccggagatggggccgtgtatcagaag
gtgagattcaaagccctggcattccatcccgagttgcaggaggtcgtgattggagatgtt
gtggatgtactcaaattcggggcattcgtaagatttggcccgattgatgggctcctgcac
ataagtcagatcatggacgatgttattgacgttgatcttgacaataaaaggtttgtgggc
aaggagagcaagagaaacttgaaggttaaagataaggtcctcgcaagggttgtggcactt
agcataaacgatgcaaatccaaggcagagcaagattggactcactatgcgccagcctgga
cttggcaaacttgaatggattgaagagcaggtgagggagggtaaaaaatga
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