Achromobacter sp. AONIH1: C2U31_14220
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Entry
C2U31_14220 CDS
T05288
Symbol
rfaD
Name
(GenBank) ADP-glyceromanno-heptose 6-epimerase
KO
K03274
ADP-L-glycero-D-manno-heptose 6-epimerase [EC:
5.1.3.20
]
Organism
achr
Achromobacter sp. AONIH1
Pathway
achr00540
Lipopolysaccharide biosynthesis
achr01100
Metabolic pathways
achr01250
Biosynthesis of nucleotide sugars
Module
achr_M00064
ADP-L-glycero-D-manno-heptose biosynthesis
Brite
KEGG Orthology (KO) [BR:
achr00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
C2U31_14220 (rfaD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
achr01005
]
C2U31_14220 (rfaD)
Enzymes [BR:
achr01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.20 ADP-glyceromanno-heptose 6-epimerase
C2U31_14220 (rfaD)
Lipopolysaccharide biosynthesis proteins [BR:
achr01005
]
Core region
C2U31_14220 (rfaD)
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GFIT
Motif
Pfam:
Epimerase
GDP_Man_Dehyd
3Beta_HSD
RmlD_sub_bind
NAD_binding_4
Polysacc_synt_2
Ldh_1_N
Motif
Other DBs
NCBI-ProteinID:
AUT47046
UniProt:
A0A2I8DI65
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All DBs
Position
3111008..3111997
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AA seq
329 aa
AA seq
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MIIVTGAAGFIGSNLVRGLNRRGITDILAVDDLTEGDKFVNLVDCKIADYMDKDDFRRRV
LDGSLSHVRAVLHQGACSDTTERNGRYMLDNNYRVTLELLEFCQARAIPFIYASSAAVYG
GSSVYVEDPANEGPLNVYGYSKLLFDQVLRTRMDTLKSQVVGLRYFNVYGPHEQHKGRMA
SVAFHNMNQFLEHGHVRLFAGWDGYVDGGQSRDFISVEDVVAVNLHFLDNPGTSGIFNCG
TGRAQPFNDVAAAVVNTLRAERGEAELSLAQLVELDLIRYIPFPDDLKGRYQSYTQADVS
RLRAAGFTAPMRDVQTGVAEYVRYWRARK
NT seq
990 nt
NT seq
+upstream
nt +downstream
nt
atgatcatcgttaccggagccgccggcttcatcggcagcaacctggtgcgcggcctgaac
cgtcgcggcatcaccgatatcctggcggtcgacgacctgaccgaaggcgacaagttcgtc
aacctggtggactgcaagatcgcggactacatggacaaggacgacttccgccgccgcgtg
ctggacggcagcctgtcgcacgtccgcgcggttctgcaccagggcgcctgctcggacacc
accgagcgcaacggtcgctacatgctcgacaacaactaccgcgtcacgctggagctgctc
gagttctgccaggcgcgcgcgatcccgttcatctacgcgtcctcggcggcggtgtacggc
ggttcgtcggtgtatgtcgaagatcccgccaacgaaggtccgctgaacgtctacggctat
tccaagctgctgttcgaccaggtgctgcgcacccgcatggacacgctcaagtcccaggtc
gtgggcctgcgctacttcaatgtctacggtccgcatgaacagcacaaggggcgcatggcc
tcggtcgccttccacaacatgaaccagttcctggaacatggccatgtgcggctgttcgcg
ggctgggacggctatgtggacggcggccagagccgcgacttcatttcggtggaggacgtg
gtggccgtgaacctgcacttcctggacaacccgggcacgtcgggcatcttcaactgcggc
acgggccgcgcacagccgttcaacgacgtggccgccgcggtggtcaacacgctgcgcgcc
gagcgcggcgaggccgagctgtcgctggcgcagctggtggaactggacctgatccgctat
atcccgttcccggacgacctcaagggacgctatcagagctatacccaggcagatgtgtcg
cgcctgcgtgccgccggtttcaccgcgcccatgcgcgacgtgcagacgggcgtggccgag
tacgtgcgctactggcgcgcccgcaagtaa
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