Acidianus sp. HS-5: HS5_21220
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Entry
HS5_21220 CDS
T07980
Name
(GenBank) DNA-directed RNA polymerase subunit B
KO
K13798
DNA-directed RNA polymerase subunit B [EC:
2.7.7.6
]
Organism
acih
Acidianus sp. HS-5
Pathway
acih03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
acih00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
HS5_21220
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
acih03021
]
HS5_21220
Enzymes [BR:
acih01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
HS5_21220
Transcription machinery [BR:
acih03021
]
Prokaryotic type
Archaeal type
RNA polymerase
Core subunits
HS5_21220
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_2
RNA_pol_Rpb2_7
RNA_pol_Rpb2_3
RNA_pol_Rpb2_4
RNA_pol_Rpb2_5
Motif
Other DBs
NCBI-ProteinID:
BDC19232
LinkDB
All DBs
Position
complement(1958955..1962326)
Genome browser
AA seq
1123 aa
AA seq
DB search
MLSIDDRWSIVESYFKSRGLVRQHLDSFNDFIKNKLQEIIDEQGEIETEIPGLKIKLGKI
RVGKPRVREADRGDREITPMEARLRNLTYAAPIYLTMIPVENNIEGEPTEVYVGDLPIML
KSVADPATDLPVEKLVEIGEDPKDPGGYFIINGTEKVIVTQEDLATNRVLVDEGKSGSNV
THTAKIISSTAGYRVPITIERLRDSTIHVSFPAVPGRIPFAILMRALGLETDRDITFAVS
FDEEVQNELLPSLEQASSITTQEDALDFIGNRVAIGQKRESRIERAEQVLDRYFLPHLGI
TPADRKKKAYYLGYAISKLIELQLGRRDPDDKDHYANKRLKLAGDLFSSLFRVAFKAFVK
DLVYQLEKSKVRGRRLTLNALVRPDIITERIRHAMATGNWVGGRTGVSQLLDRTNWLSML
SHLRRVISSLARGQPNFEARDLHGTQWGRMCPFETPEGPNSGLVKNLALLAQISVGINDK
IVEKTLYELGVVPLEELIKKIDEGEDPSSYNNWSKIVLNGRLVGYYPNGEELANKIREKR
RSGEISDEINVAHLVTDTYDEVYINSDSGRVRRPLIVVKDGKPLVAEDDIQKLKKGEITF
DTLVKEGKIEFLDAEEEENTYIALEPSKLTPEHTHLEIWPPAILGITASITPYPEHNQSP
RNTYQSAMAKQALGLYASNYQLRTDSRAHFLHYPQKPLVQSRALDIIGYNSRPAGENAIL
AVMSFTGYNMEDAIIMNKSSVERGMFRSTFFRLYSAEEIKYPGGQEDKIELPEPGVRGYK
GSDYYKSLDENGIVPPEVEVKGGDVLIGKVSPPRFLQEFKELSPEQAKRDTSIITRHGEK
GIVDLVLITETSEGNKLVKVRVRDLRIPELGDKFATRHGQKGVVGMLIPQADMPYTVKGV
VPDIILNPHSLPSRMTLGQVMEALAGKYAALSGKTVDATPFYNTPIEELQKKLLDFGFLP
DGTEVVYDGRTGQKVKGRILYGIVYYQKLHHMVADKMHGRARGPIQILTRQPTEGRAREG
GLRFGEMERDCLIGYGAAMVIKDRLLDNSDKTTIYVCEQCGYIGWYDKNKNKYVCPIHGD
KANLYPVTISYAFKLLLQELMSMVISPRLILGDKVSLKGDNNE
NT seq
3372 nt
NT seq
+upstream
nt +downstream
nt
atgctttcaatagacgatagatggtcaatagtagaatcctattttaaatctagggggtta
gtaaggcaacacttggactcatttaacgatttcataaaaaataaactccaagaaataatt
gacgagcaaggagagatagagactgaaatccctgggttaaagattaagcttggtaaaata
agagtaggtaaaccaagagtaagggaggcagatagaggagatagagaaataactccaatg
gaagcaaggcttaggaacttaacttatgctgcgcctatatacctgacaatgatacctgta
gagaataacattgaaggagaacctacagaagtttatgttggggatttacctataatgctc
aagtcagtagcagatcctgctacagatctgcctgtagaaaaacttgtggaaataggtgag
gatcctaaagatcctggaggatattttataataaacggaacagagaaagttattgtaaca
caagaggatttagctactaatagagttttagtagacgagggaaaaagtggttctaatgta
actcataccgccaaaataatatctagcactgcaggatatagagttccaatcactatagaa
agattaagagactctactattcacgtttcatttcctgcagtacctggaagaattccgttc
gcaatattaatgagagctttaggtttagaaactgatagagatataacctttgccgtttcc
tttgatgaagaagttcaaaatgagctattaccatctttagaacaagcttcctctattact
acgcaagaggacgctttggacttcattggaaacagagtcgctattgggcaaaaaagagaa
agcaggatagaaagagcagagcaagtcctagacagatatttcctacctcatttgggtatt
actcctgcagataggaaaaagaaagcttactatttaggttacgctatttcaaagttaatt
gaattacaattaggtagaagagatccagacgataaggatcattatgctaacaagagactt
aagcttgcaggtgatctattttctagtttatttagagtagcgttcaaggcatttgtgaaa
gatcttgtttatcagttagaaaaatctaaggtaaggggaagaagattaactcttaatgca
ttagttaggccagatattataacagaaagaataaggcacgcgatggctacaggaaattgg
gtagggggtagaactggcgtaagccaacttttagatagaacaaattggttatcaatgtta
agccatttaaggagagttatttcgtctctagctagaggtcaaccgaattttgaagctaga
gatttacatggtacacaatggggaaggatgtgcccatttgaaactccagaagggccaaat
agtggtctagttaaaaacttggctttgttagctcaaatatctgttgggataaatgataaa
attgttgaaaaaacgctttatgagctaggagtagttcctttagaagaattaataaagaag
attgatgagggagaggatccttcatcttataataactggagtaaaatagtattaaatgga
agactagtaggttattatcccaatggtgaagaattagccaataaaataagggaaaagaga
agatctggagaaataagtgatgagataaatgtagctcatctagttacagatacttatgat
gaagtttacattaattcagacagcggaagagttagaagacctttaatagtagtaaaagat
ggtaagccattagttgctgaagatgatattcaaaaattaaagaaaggagagatcaccttt
gatactctagtgaaagaaggtaaaatagaattcttagatgccgaagaagaagagaacaca
tatatagctttagaaccaagcaagcttactcctgaacatactcatttagaaatatggcct
ccggcaattcttggaattactgcatctataactccttatccagaacataatcagtctcct
agaaacacttatcagtctgcaatggccaagcaagctttaggactttacgcctctaattac
cagttaagaactgatagcagagcccatttcctacactatccacaaaaaccattagttcaa
agtagggcattagacataattggatacaatagtagaccggccggagagaatgctatacta
gcagtaatgtcgtttacaggatataatatggaagacgcaataatcatgaataaatcttca
gtagagagaggaatgtttagatcgactttcttcagattatattcggcagaagaaattaaa
tatcctggagggcaggaggataagatagaattacccgagccaggagttagaggatataaa
ggaagtgattattacaagtccttagatgagaacggaatagtgccaccggaagttgaagta
aaaggaggagacgtattaataggtaaagtcagcccaccaaggttcttacaagaatttaag
gaactttcacctgagcaggcaaagagagatacctcaataataaccagacatggagaaaaa
ggtatagtagatttagtattaattactgaaacgtcagaaggtaacaagttagtaaaggtt
agagtaagagatttaagaattccggaattaggagataagtttgcaacaagacacgggcag
aaaggagtagtaggaatgctaatacctcaagctgatatgccatatactgttaaaggagtt
gtgccagatataatattgaatcctcactcgttaccttctagaatgacattaggccaagta
atggaagcattagctgggaagtatgccgcattatctggtaaaaccgttgatgctactcca
ttctataatactccaatagaagaattgcaaaagaagcttttagacttcggatttttgcct
gacggtaccgaagttgtatatgatggtagaacaggacaaaaggtaaagggaagaatatta
tatggaatcgtatattatcagaagttacatcacatggttgcagataaaatgcatggtaga
gccagaggtcctatccagattttaactagacaacctacagaaggtagggctagagaagga
ggattaagatttggcgaaatggagagggattgcttaataggctatggcgcagcaatggtt
ataaaagataggttacttgataattccgataaaactacaatttatgtttgtgagcaatgc
ggatatataggttggtacgataagaataagaacaaatacgtatgcccaatacatggcgat
aaagcaaatctatacccagttaccatatcttatgcgttcaaattactattacaggaatta
atgagtatggttatttcacctagattaattctaggtgataaagtttccttaaaaggtgat
aataatgagtga
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