Acidipropionibacterium virtanenii: JS278_01815
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Entry
JS278_01815 CDS
T05538
Symbol
rimO
Name
(GenBank) Ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
acij
Acidipropionibacterium virtanenii
Brite
KEGG Orthology (KO) [BR:
acij00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
acij03009
]
JS278_01815 (rimO)
Enzymes [BR:
acij01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
JS278_01815 (rimO)
Ribosome biogenesis [BR:
acij03009
]
Prokaryotic type
ribosomal protein modification factors
JS278_01815 (rimO)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM_2
TraT
Motif
Other DBs
NCBI-ProteinID:
AXE38974
UniProt:
A0A344UUM6
LinkDB
All DBs
Position
complement(1982353..1983792)
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AA seq
479 aa
AA seq
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MTDHLMTVHLVSMGCARNEVDSEELAARLEAGGFRLVDDPGQAETVMVNTCGFIEQAKKD
SVDTLLEAADLKSGGTTKSVVAVGCMAERYGAELAEALPEADAVLGFDDYQDISARLQTI
LAGGSVEAHIPHDRRTLLPLSPIDRPDAAAGVAVPGIRTAPDLPASVTPGSGPRAATRRR
LGSGPSAPLKIASGCDRRCAFCAIPSFRGSYLSRPVDEIVEEARWLVGHGVKEAFLVSEN
SSSYGKDLGDLRHMEKLVRELDRVDGLEWIRISYLQPAELRPSLIDAMLGTEKVVPYFDL
SFQHASGPLLRRMRRFGDAESFLALIDGIRARCPEAGFRSNFITGFPGETEKDLDILVDF
LSAARLDVAGIFAYSDEEGTEGARLDGHLDDDVIAERRDRLADIVDEVVAQRAEDRIGEC
APILVEQVDADGAVGRAPHQGPEVDGTVTVPDATGIGIGELMPVRFTGSDGADLIGESV
NT seq
1440 nt
NT seq
+upstream
nt +downstream
nt
atgaccgaccacctcatgaccgtgcatctggtatcgatgggctgcgcccgcaacgaggtc
gattccgaggagctggcggcccgcctggaggccggcgggttccgcctggtcgacgatccg
gggcaggcggagacggtgatggtcaacacctgcggattcatcgagcaggccaagaaggac
tcggtcgacaccctgctggaggccgccgatctcaaatcgggcggcaccacgaagtctgtg
gtggcggtcggctgcatggccgaacgctacggcgccgaactcgccgaggcactgccggag
gccgatgccgtcctcggcttcgacgactaccaggacatctcggcgaggctgcagacgatc
ctcgccgggggatcggtggaggcccacattccgcatgaccggcggaccctgctgcccctg
tcgccgatcgaccgtcccgacgccgcagcgggagtcgcggtgcccggcattcgcaccgca
cccgacctgccggcctccgtgacaccgggctccgggccgcgcgccgccacccggcgacgc
ctcgggtcggggcccagcgcaccgctgaagatcgcctcgggctgcgaccgccgatgcgcc
ttctgcgccatcccgagtttccgcggctcctacctgtcacgcccggtcgacgagatcgtc
gaggaggcccgctggctggtcggccacggcgtcaaggaggccttcctggtctcggagaac
tccagctcctacggcaaggatctgggcgatctgcgccacatggagaagctggtgcgcgag
ctcgaccgggtcgacggcctggagtggatccggatctcctaccttcagcccgccgagctg
cgaccctccctgatcgacgcgatgctgggcaccgagaaggtcgtgccctacttcgacctg
tccttccagcacgcctccggcccactgctgcgccggatgagacggttcggggacgccgag
tccttcctggctctcatcgacggcatccgcgcccgctgcccggaggccggattccgctcc
aacttcatcaccggcttccccggcgagaccgagaaggacctcgacatcctcgtcgacttc
ctgtcggcggcccgtctggacgtcgccgggatcttcgcctactccgacgaggagggtacc
gagggggcccggctcgacggccatctggatgacgacgtcattgccgagcgccgtgaccgg
ctcgccgatatcgtcgacgaggtggtcgcccagcgcgccgaggaccgcatcggcgagtgc
gccccgatactggtcgaacaggtcgatgccgacggggccgtcgggcgcgcaccgcatcag
ggcccggaggtcgatggcaccgtcacggtgcccgatgcgaccgggatcgggatcggcgag
ctgatgcctgtccggttcaccggctccgacggcgccgacctgatcggggagtccgtatga
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