Arthrobacter citreus: HPK19_22835
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Entry
HPK19_22835 CDS
T06606
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
acit
Arthrobacter citreus
Pathway
acit03030
DNA replication
acit03410
Base excision repair
acit03420
Nucleotide excision repair
acit03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
acit00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
HPK19_22835 (polA)
03410 Base excision repair
HPK19_22835 (polA)
03420 Nucleotide excision repair
HPK19_22835 (polA)
03440 Homologous recombination
HPK19_22835 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
acit03032
]
HPK19_22835 (polA)
03400 DNA repair and recombination proteins [BR:
acit03400
]
HPK19_22835 (polA)
Enzymes [BR:
acit01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
HPK19_22835 (polA)
DNA replication proteins [BR:
acit03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
HPK19_22835 (polA)
DNA repair and recombination proteins [BR:
acit03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
HPK19_22835 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
HPK19_22835 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
HHH_5
Taq-exonuc
HHH_2
HHH
Motif
Other DBs
NCBI-ProteinID:
QKE75364
LinkDB
All DBs
Position
4809257..4811881
Genome browser
AA seq
874 aa
AA seq
DB search
MKNKLVLIDGNSIAYRAFFALPLLSNDKGVHTNAIYGFTMMLLKILEDEKPSHMLVAFDA
GKTTFRHSTFKEYKGGRQKTPPELSEQFPLVRQLLDTYGIARYELDNYEADDIIGTLAGQ
ASKDEYEVKVISGDRDLLQLVDDRITVSMTKKGITEVEEYNPAAIHEKYEISPEQIIDMK
GLMGDKSDNIPGVPGIGEKTAIKLLKQYQTVEGLYEHLDEVSGAKLLQNLSENKEQALMS
KQLATINKNSPIELTVNDTMLPEADVNKVAEFFKSLGFTSLLAKLDLTESVEELEEIKYD
VLDSIEEKHLANHSSLIVEMIGENYHSEQIQGFGLSNENGHFFIPTSVGLESDLFKKWLE
DERVEKNVYDAKGAYVALKWRGIDLKGVNFDPLLASYIYDPAQSNKEFADIVNGKIDFSI
QTAESIYGKGAKQAQPSQEVLAEYIVRKSIAISKLEETLEESLRKNSQYELLTELELPLT
FILGDMEFEGVTVREETLRTMGSELANTLKVLEENIYELAGEKFNINSPKQLGVILFEKL
NLPSGKKTKTGYSTSADVLEKLESEHEIIRLILHYRQVGKLNSTYVEGLLKVINQTDSKV
HTRFNQVLAQTGRLSSIDPNLQNIPIRLEEGRKIRKAFVASKKDWVIFAADYSQIELRVL
AHIAQDDNLMEAFKNDFDVHTKTAMDVFHVNADEVTSNMRRQAKAVNFGIVYGISDYGLS
QGLGITRKEAGIFIEKYFASFPKVKDYMSDIVQKAKLDGFVSTILNRRRYIPEITSSNFN
VRGFAERTAMNTPIQGSAADIIKKAMILLDERLKAEKLQAKLILQVHDELILEAPKEELA
TLEKLVPEVMEHAVELLVPLKVDYNSGESWFEAK
NT seq
2625 nt
NT seq
+upstream
nt +downstream
nt
ttgaagaataagttggttttgattgatgggaatagtattgcctatagggctttctttgca
ttgcctttattgagtaatgataaaggtgttcatacgaatgcgatttatggttttacaatg
atgttgttgaaaattcttgaggatgaaaaaccgagtcatatgcttgttgcatttgatgct
gggaaaactacatttagacatagtacatttaaagagtataaaggtggaagacagaagact
ccaccagagttaagcgaacagtttccacttgttcgtcaactattagatacttatggaatt
gcacgttatgaattagataattacgaagcggatgatattattggaacacttgcaggacaa
gcgtcaaaagatgaatatgaagtaaaagtcatctctggagatcgagatttattacagtta
gttgatgaccgtattacagtaagtatgactaaaaagggaattactgaagtagaggaatat
aatccggctgcaatacatgaaaagtatgagatttcacctgagcaaattattgatatgaaa
ggtttaatgggtgataaatcagataatatacctggtgttccagggattggtgaaaaaact
gcaattaagctcttaaagcagtatcaaactgtagagggcctatatgaacatttggatgaa
gtaagtggggctaagcttcttcaaaatttaagtgagaataaagaacaagctctaatgagt
aaacaattagcaacaatcaataaaaactcgccaatcgaactgactgtaaatgatactatg
cttcctgaagcagatgtgaataaggtggcagagttttttaaatctctcggttttacttct
ttattagctaaattggatctaacggaatcagtcgaagaactagaagagataaagtatgat
gtacttgattcaatcgaagaaaaacacttagcaaatcattcaagtttaatcgtggaaatg
attggtgaaaattatcactcggaacaaattcaaggctttggactttcaaatgaaaatggc
catttcttcattccgacatctgttggattagagtcagatttgtttaaaaagtggcttgag
gatgagcgtgttgaaaagaatgtatatgatgcgaaaggtgcatatgttgcactaaagtgg
agaggaatcgatttaaagggagttaatttcgatccgttacttgcttcatatatatatgac
ccagcacagtctaataaagaatttgctgatatcgtaaatggtaaaattgatttttcaatt
caaaccgcagaatcaatttacggtaaaggggcaaaacaagcgcagccatctcaagaagtt
ttagccgagtatatcgttcgcaaatcgattgctattagtaagttagaagaaacacttgaa
gagtcattacgaaaaaatagtcaatatgaactattaactgagttagaattaccattaacg
tttattttaggtgatatggaatttgaaggagtaacagttagagaagagactcttcgtacg
atgggttcagagctagctaatacattaaaagtacttgaagaaaatatttatgagctagct
ggtgagaagttcaatattaattcgcctaaacaattaggtgttatattatttgagaaatta
aatttgccgtctggtaaaaaaacaaaaacaggttattcgacttctgctgatgtccttgaa
aaattagaatcagaacatgaaattattcgattaattcttcattatcgacaagttggaaaa
ttgaattccacatacgtcgagggattattaaaagtaatcaatcagacagattcgaaggtt
catactcgctttaatcaagtattggcacaaacaggtcgtttaagctcaattgatcctaac
cttcaaaacatcccgattcgattagaagaaggtagaaaaattaggaaagcttttgtagca
tcaaaaaaagattgggtgatttttgcagctgattattcacagattgagttaagggtattg
gctcatatagcgcaagatgataatttaatggaagcatttaaaaacgattttgatgttcat
acaaaaactgcaatggatgtttttcatgtaaatgcagatgaagtgacaagcaatatgaga
agacaagcaaaagctgttaacttcgggatcgtgtacggaattagtgattatggtttatca
caaggattaggtattacaagaaaagaagcaggtatatttattgaaaaatactttgctagt
tttccaaaagtaaaagattatatgtcagatatcgttcaaaaagctaagttagatggattt
gtaagtacaattttaaatagacgtcgttatattcctgaaattacaagctctaattttaat
gtccgtggatttgctgaaagaacagcgatgaatacgcctattcaaggaagtgctgcggat
attattaaaaaggcaatgattttactagatgaacgacttaaagcagaaaaacttcaagca
aaattaattttacaagtacacgatgaattaattttagaagcacctaaagaagaattagca
accttagaaaaattagttccagaagtaatggagcatgcagtcgaattattagtaccacta
aaggttgactataattctggagaatcttggttcgaagcaaaataa
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