Candidatus Andeanibacterium colombiense: P0Y56_12115
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Entry
P0Y56_12115 CDS
T09799
Symbol
ligA
Name
(GenBank) protocatechuate 4,5-dioxygenase subunit alpha
KO
K04100
protocatechuate 4,5-dioxygenase, alpha chain [EC:
1.13.11.8
]
Organism
acob
Candidatus Andeanibacterium colombiense
Pathway
acob00362
Benzoate degradation
acob00624
Polycyclic aromatic hydrocarbon degradation
acob00627
Aminobenzoate degradation
acob01100
Metabolic pathways
acob01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
acob00001
]
09100 Metabolism
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
P0Y56_12115 (ligA)
00627 Aminobenzoate degradation
P0Y56_12115 (ligA)
00624 Polycyclic aromatic hydrocarbon degradation
P0Y56_12115 (ligA)
Enzymes [BR:
acob01000
]
1. Oxidoreductases
1.13 Acting on single donors with incorporation of molecular oxygen (oxygenases)
1.13.11 With incorporation of two atoms of oxygen
1.13.11.8 protocatechuate 4,5-dioxygenase
P0Y56_12115 (ligA)
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Motif
Pfam:
LigA
Motif
Other DBs
NCBI-ProteinID:
WEK45770
LinkDB
All DBs
Position
complement(2457477..2457896)
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AA seq
139 aa
AA seq
DB search
MTDKKERIDIHSYLAAFDDIPGTRVFTAKRARQGYHLNQFAMSLMKDENRKRFLADESAY
LDEWDITPAAKKAVLARDYNGMIDEGGNVYFLSKLFSTDGKSFQFAAGSMTGMSQEEYAQ
MMINGGRSPEGVRSLKGGF
NT seq
420 nt
NT seq
+upstream
nt +downstream
nt
atgaccgacaagaaagagcggatcgacatccactcctacctcgccgccttcgacgacatc
ccgggcaccagggtgttcaccgcgaagcgcgcgcgccagggctaccacctgaaccagttc
gcgatgagcctgatgaaggacgagaaccgcaagcgcttcctcgccgacgaaagcgcctat
ctcgacgaatgggacatcaccccggcggccaagaaggccgtgctcgcgcgcgattacaac
ggcatgatcgacgaaggcggcaacgtctacttcctgtccaagctgttctcgaccgatggc
aagagcttccagtttgcggccggatcgatgaccggcatgagccaggaagaatatgcccag
atgatgatcaatggtggccgttcgcccgaaggcgtccgctcgctcaagggaggtttctga
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