Anopheles coluzzii: 120953964
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Entry
120953964 CDS
T07312
Name
(RefSeq) protein CLP1 homolog
KO
K14399
polyribonucleotide 5'-hydroxyl-kinase [EC:
2.7.1.78
]
Organism
acoz
Anopheles coluzzii
Pathway
acoz03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
acoz00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
120953964
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
acoz03019
]
120953964
Enzymes [BR:
acoz01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.1 Phosphotransferases with an alcohol group as acceptor
2.7.1.78 polynucleotide 5'-hydroxyl-kinase
120953964
Messenger RNA biogenesis [BR:
acoz03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor IIm (CFIIm)
120953964
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CLP1_P
Clp1
CLP1_N
TniB
CbiA
AAA_16
AAA_22
ATP_bind_1
ATPase
ATPase_2
nSTAND3
AAA_24
AAA_14
PBSX_XtrA
AAA_35
Motif
Other DBs
NCBI-GeneID:
120953964
NCBI-ProteinID:
XP_040230358
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All DBs
Position
2:complement(114517698..114519202)
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AA seq
423 aa
AA seq
DB search
MTDDKAVPRTDYKLESDSELRFEIENKNEKVTVVLLNGQAELFGTELVVKKPYEFVTGAK
VAIFTYHGCTIELRGKPDVAYVAKETPMVMYLNANSALEHLRNKAEQEDAQGPIVMVVGP
TDVGKTTLCRIFLNYAVRLGRRPIFVDLDVGQGGIAIPGTIGALLVERPAPVAEGFSQQA
PLVYHYGHSTPSANSTFYDVLISKLAETTLERLQANKKAKSSGMIINTCGWVKGSGYSHI
LHTVEAFEVTAIFVLDQERLYNELLRDVKGTVQVVFLPKSGGVVERTKSQRTEARDQRIR
EYFYGSKMPLFPHSFDVKFSDIKIFKVGSPPLPDSCLPLGMKAEDNYTKLVAVQPGPQLL
HHILAVSFAESTDENVIQTNVAGFICVTNVNMDKQVLTVLSPQPRPLPQTILLVSDLQFM
DSH
NT seq
1272 nt
NT seq
+upstream
nt +downstream
nt
atgacggacgataaagccgtccccaggacggactacaagctggagtccgattcggagctg
cggtttgaaatagaaaacaaaaacgaaaaagtcactgttgtgctgctcaatggacaagcg
gaactgttcgggaccgagctggtggtaaaaaagccgtacgagttcgttaccggtgccaag
gtagcgatctttacctaccacggctgtacgatcgagctgcgcggcaagccggacgtagcg
tacgttgccaaagaaactcccatggttatgtacctgaatgctaactctgctctggagcat
ctgcgcaacaaagccgaacaggaggacgcacagggaccaatcgtgatggtagtgggcccc
accgatgtcggaaagaccacgctgtgccgcatattcttgaactatgcagtgcggctgggt
agacgcccgatattcgtcgacttggatgtgggtcagggaggaatcgccatacccggcacc
atcggtgcgttactcgtcgagcgaccagcgccggtagcggaaggcttctcgcaacaggcc
cctctcgtctaccactacggccatagtacaccgtcggcgaacagtacgttctatgatgtg
ctgatttcgaagctggccgaaacgacgctggaacggttgcaggcaaacaaaaaggccaaa
tcgtccggaatgataatcaacacctgcggctgggtgaaaggttccggctactcgcacatc
ctgcacaccgtcgaagcattcgaagtgaccgctatctttgtgctcgaccaagagcgcctg
tacaacgagttgctgcgggatgtcaagggcaccgtgcaggttgtgtttctgccgaaaagc
ggtggcgttgtggagcgcaccaaatcgcagcgcaccgaggcaagggatcagcgcattaga
gaatatttctacggctccaaaatgcccctattcccgcatagcttcgatgtaaagttttcg
gacataaaaatatttaaggttggctcaccgccgctgccggattcgtgcctgccgctgggc
atgaaggcggaagacaactataccaagctggtcgcagtacagcccggtccgcagctgttg
caccacatcctggcggtcagctttgccgagagcacggacgagaatgtgatacagacaaac
gtggccggttttatctgtgttaccaacgtcaacatggacaagcaggtactgacggtgtta
tctcctcagccgcggccactcccgcaaacgatacttctcgtttccgatcttcagttcatg
gacagtcattag
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