Aliiroseovarius crassostreae: K3J57_11285
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Entry
K3J57_11285 CDS
T08444
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
acro
Aliiroseovarius crassostreae
Brite
KEGG Orthology (KO) [BR:
acro00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
acro03009
]
K3J57_11285 (rimO)
Enzymes [BR:
acro01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
K3J57_11285 (rimO)
Ribosome biogenesis [BR:
acro03009
]
Prokaryotic type
ribosomal protein modification factors
K3J57_11285 (rimO)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
TRAM_2
UPF0004
TRAM
CLP1_P
Motif
Other DBs
NCBI-ProteinID:
UWP88474
LinkDB
All DBs
Position
2366748..2368166
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AA seq
472 aa
AA seq
DB search
MTDAINPPNLRPDLAPKARITDPVRHSDRPGQPKIGMVSLGCPKALVDSERILTRLRAEG
YAISPDYTGADAVIVNTCGFLDSAKAESLEAIGEALKENGRVIVTGCLGAEEDYIRGTHP
SVLAVTGPHQYEQVLDAVHGAVPPAPDPFVDLLPASGVKLTPRHYSYLKISEGCNHHCKF
CIIPDMRGRLVSRPAHAVVREAEKLVEAGVKELLVISQDTSAYGVDIKHAEERGHRAHIT
DLARDLGALGVGKDLWVRMHYIYPYPHVRELIPLMAAYEDSKGLILPYLDIPFQHAHPDT
LKRMARPAAAERTLDRIAEWRGICPDITLRSTFIVGYPGETEAEFQTLLDWMDDAQLDRV
GCFQYENVDGARSNDLPDHVPAEVKQDRWERFMEKAQAISEAKLTAKVGQVMDVIVDDID
EDGIATCRTKADAPEIDGNLFIDEGTEGLQVGEIVSVEVDEAGEYDLWGVLR
NT seq
1419 nt
NT seq
+upstream
nt +downstream
nt
atgactgatgcgatcaaccctcccaatcttcgcccggaccttgcccccaaggcccgcatc
accgaccccgtgcgccactctgatcggcctggccagccaaaaatcggcatggtcagcctg
ggctgtcccaaggcgctggtggatagcgaacggatcctgacgcgattgcgcgctgagggc
tatgcgatcagcccggattacaccggggcggatgcggtgatcgtgaacacctgcgggttt
cttgattcagccaaggccgaaagccttgaggcgatcggggaggcgctgaaggaaaacggg
cgtgtcatcgtcaccggctgtctgggggcggaagaggattacatccgcggcacccatccc
agcgtgttggccgtgaccggcccgcatcaatatgagcaggttctggacgcggtgcatggg
gcggtgccgcccgcgccggacccgtttgtggatctgctgccagcgtcgggcgtgaagctg
accccgcgccattacagctatctgaagatttccgagggctgcaatcaccattgcaaattc
tgcatcatccccgacatgcgggggcgcctggtgtcgcgcccggcccatgcggtggtgcgc
gaggcggaaaagctggtggaggcaggcgtcaaggaactgctggtcatttcgcaggacaca
tccgcctatggggtggatatcaaacacgcagaggaacgcgggcatcgggcgcatatcacc
gatctggcgcgcgaccttggggcgctgggcgtgggcaaagacctgtgggtgcggatgcat
tacatctatccctacccccatgtgcgtgagctgatcccgctgatggcggcctatgaggat
tcaaagggcctgatcctgccctatctcgatattccgttccagcacgcccaccctgacacg
ctgaaacgcatggcgcgcccggcggccgcagaacgcacgctggaccggattgccgaatgg
cgcggcatttgcccggacatcaccctgcgctcgaccttcatcgtgggctatcccggcgaa
accgaggccgagttccagacccttctggattggatggacgacgcgcaactggatcgggtt
ggctgctttcaatatgaaaatgttgacggggcgcggtcaaacgacctgcccgatcacgtg
cctgccgaggtcaaacaggaccggtgggagcggttcatggagaaagcacaggcgatttcc
gaggcgaaactgaccgcaaaagtgggtcaggtgatggatgtgatcgttgatgacatcgac
gaagacggcatcgccacctgccgcaccaaggcggatgcgccagagatcgacgggaacctg
ttcatcgacgagggcaccgaagggttgcaggtcggtgagattgtttcggtcgaggtggat
gaggctggagagtatgatctttggggggtgttgcggtaa
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