Agrobacterium cucumeris: KZ699_20675
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Entry
KZ699_20675 CDS
T09081
Name
(GenBank) sarcosine oxidase subunit alpha
KO
K00302
sarcosine oxidase, subunit alpha [EC:
1.5.3.24
1.5.3.1
]
Organism
acuc
Agrobacterium cucumeris
Pathway
acuc00260
Glycine, serine and threonine metabolism
acuc01100
Metabolic pathways
Module
acuc_M00975
Betaine degradation, bacteria, betaine => pyruvate
Brite
KEGG Orthology (KO) [BR:
acuc00001
]
09100 Metabolism
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
KZ699_20675
Enzymes [BR:
acuc01000
]
1. Oxidoreductases
1.5 Acting on the CH-NH group of donors
1.5.3 With oxygen as acceptor
1.5.3.1 sarcosine oxidase (formaldehyde-forming)
KZ699_20675
1.5.3.24 sarcosine oxidase (5,10-methylenetetrahydrofolate-forming)
KZ699_20675
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GCV_T
SO_alpha_A3
Fer2_4
GCV_T_C
Pyr_redox_2
FAD_oxidored
DAO
FAD_binding_2
NAD_binding_8
GIDA
HI0933_like
Thi4
AlaDh_PNT_C
Pyr_redox_3
Pyr_redox
Lycopene_cycl
FAD_binding_3
Fer2_BFD
Motif
Other DBs
NCBI-ProteinID:
WHO10897
LinkDB
All DBs
Position
2:1423642..1426602
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AA seq
986 aa
AA seq
DB search
MSGDYRIKGAGRLTPARTARFTFDGKIYSALEGDTVASALLANGVHLIGRSFKYHRPRGF
LSAGPEEPNALIDVSRDSMRKQPNVRATVQDVFDGAIIASQNRFPSLSFDISAINDFLSP
MFAAGFYYKTFMWPKAAWHKIYEPIIRRAAGLGKAPSEPDADHYSGRYAHCDLLVAGGGV
AGLTAALAAAKTGISVILVDENAEIGGALRFDTGAVIDGLPGYEWAQKVLAELKSLPNVR
VLTRTTAFGYYNYNFVALAERVTDHLATPARHQPRERLWQVRAKKVVLAAGAIERHMVFA
NNDRPGIMLASAARTYLNHYGVAVGHNVGVYTAHDSAYETAFDLKKAGVKIAAIVDCREN
PDRLLLDEARALGIEVLAGHSVYDTVGRLRVSSMTVGRNGGSNKRKIAIDALVVSAGWTP
SVHLFSQSRGKLKFDAANQRFLPDIHVQDCVSIGTCNGTDDLSALIAEAAAAGGSAVEFS
GENTRDWTGGMIGAAEGAGEGTGVKAFIDFQHDVCAKDIRLAVREGMHSVEHIKRFTTNG
MASDQGKMSNMHGLAIASEALGRDLPKVGLTTFRQPYTPVTFGTLINHSRGALFDPARKT
PMHDEEAAAGAVFEDVGNWKRAWFFPRAGEDMHEALNRECKTVRDSVGVFDASTLGKIEV
VGPDAAKFLNLIYTNAWDTLKPGRCRYGIMTREDGFVYDDGVVGRLAEDRFHVTTTTGGA
PRVLQHMEDYLQTEFPDLNVWLTSATEQWAVIAVQGPKAREVIAPFVEGIDLSPEAFPHM
AVAEGKFCGVPTRLFRVSFTGELGFEINVPADYGAAVWSAIRERAEAVGGCLYGTETMHI
LRAEKGYIIVGQDTDGTVTPDDAGLNWAVSKKKTDFVGIRGLKRPDLTRSGRKQLVGLKT
KDRLTVPEEGGQIVVDPNQPKPMTMLGHVTSAYWSENLGHSIAFALVADGRARMGETLYI
PLADKTIAVEVTDMVFLDKEGARLNG
NT seq
2961 nt
NT seq
+upstream
nt +downstream
nt
atgagcggcgattatcgtatcaagggtgcaggtcgcctgacgcccgccagaaccgcgcgc
tttacctttgatggcaagatttactctgcgcttgaaggcgacacggttgcctcagcgctt
ctcgcaaacggcgtgcatctgatcggccgctcgttcaaatatcaccggccgcgcggcttt
ctgtctgcagggccggaagagccgaatgcgctgatcgacgtctcacgcgacagcatgcgc
aagcagcccaatgtgcgcgcaacggtgcaggatgtgttcgatggcgcgatcatcgcctca
cagaaccgctttccgtcgctgtccttcgatatcagcgcgatcaacgacttcctttcgccg
atgtttgcggctggtttctactacaaaactttcatgtggccgaaggccgcctggcacaag
atttacgagccgatcatccgccgtgctgccggtcttggcaaagcgccgagcgaaccggat
gcggatcattactccggccgttatgcccattgtgacctgttggtggccggtggtggcgtt
gccggtctgacagcggcgcttgctgcggcgaaaaccggcatcagcgtcattctggtggat
gagaatgcagaaatcggcggcgcgctgcgcttcgacacgggggcggttatcgatggcctg
cccggctatgaatgggcgcagaaggttctcgccgaactgaaatccctgcctaacgtccgt
gttctgacccgcacgacggccttcggttattacaactacaatttcgtggcgctggcggag
cgcgtgaccgatcatcttgccacgcccgccagacaccagccgcgcgagcggctgtggcag
gtgcgtgccaaaaaggtcgttctggccgcaggcgcgatcgagcgccacatggtcttcgcc
aataacgaccgtcccggcatcatgctggcctcggccgcacgcacctatctcaatcactat
ggggtggctgtcggccataatgtgggtgtctacaccgcccatgattcggcctatgaaacg
gctttcgaccttaagaaagccggtgtgaagatcgccgccatcgtcgattgccgcgagaac
ccggatcggctgctgctggatgaggcacgggcacttggcatcgaggtgctggcgggccac
agcgtttatgataccgtcgggcgcctgcgcgtgtcgtccatgaccgttggccgtaatggc
ggctcgaacaaacgcaagatcgccattgatgcgctcgtggtttccgccggctggaccccg
tctgtacatctcttttcgcaatcgcgcggcaagctgaagtttgacgcggctaaccagcgc
ttcctgcctgacatccatgtgcaggactgtgtttccatcggcacctgcaacggcacggac
gatctctccgcactgattgccgaggcggctgccgcaggcggttccgccgtggagttttcc
ggcgagaatacccgtgactggaccggcggcatgatcggcgcggccgaaggcgcgggtgaa
ggaaccggggttaaggccttcatcgatttccagcatgatgtctgcgccaaggatattcgc
cttgccgtgcgagagggcatgcattccgtcgagcatatcaaacgcttcaccaccaatggc
atggcgtcggatcagggcaagatgtccaacatgcacgggctcgccatcgcatccgaagcg
ctgggtcgggatttgccgaaggtcggcctcaccactttccgccagccctatacgccggtc
accttcggcacactcatcaatcattcgcgcggcgcgctgtttgacccggcccgcaagacg
ccgatgcacgatgaagaggcggcagcaggtgcggtgttcgaggatgtcggaaactggaaa
cgcgcctggtttttcccgcgcgcgggtgaggacatgcatgaagcgctgaaccgggagtgc
aagacggtgcgagacagcgttggcgtcttcgatgcctcgactctcggcaagattgaggtg
gtcggccctgacgcggcgaagttcctcaacctcatctacacaaacgcctgggatacgctg
aaacccggtcgctgccgttatggcatcatgacccgtgaagacggcttcgtttatgatgat
ggcgtcgtcgggcggcttgccgaggaccgtttccatgtgacgacgacgaccggcggcgcg
ccgcgtgtgctgcagcacatggaggattatctccagaccgagttccccgatctcaacgtc
tggctaacctcggccaccgaacaatgggctgtcattgccgtgcaggggccaaaggcacgc
gaggtgatcgcgcctttcgtcgagggcatcgatctgtcgccggaagccttcccgcatatg
gcggtggccgagggcaagttctgcggcgtgccgacgcggcttttccgggtttccttcacc
ggcgagcttggtttcgaaatcaacgttccggccgattacggcgcagccgtctggtctgcc
atccgggaaagggccgaagccgttggcggttgcctttatggcaccgagaccatgcatatc
ctgcgtgctgaaaagggctatatcatcgtcgggcaggataccgacggcacggtgacgcct
gatgatgccgggctcaactgggcggtttccaagaagaagacggatttcgtcggtattcgc
ggtctcaagcgccccgatctcacacgctccggccgtaagcagctggtgggtctgaagacg
aaggacaggctgaccgtcccggaagaaggcggccagatcgttgttgatccgaatcagccg
aaacccatgaccatgctcggccatgtcacctccgcctactggtcggaaaatctcggccat
tccattgcctttgcgctggtggcggatggcagggcgcgcatgggcgaaacgctttatatc
ccgctcgccgataaaaccattgccgtcgaagtgaccgacatggtcttcctcgacaaggaa
ggagcccgtctcaatggctga
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