Athene cunicularia (burrowing owl): 113489106
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Entry
113489106 CDS
T05777
Symbol
SCN4A
Name
(RefSeq) LOW QUALITY PROTEIN: sodium channel protein type 4 subunit alpha
KO
K04837
voltage-gated sodium channel type IV alpha
Organism
acun
Athene cunicularia (burrowing owl)
Brite
KEGG Orthology (KO) [BR:
acun00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
acun04040
]
113489106 (SCN4A)
Ion channels [BR:
acun04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
113489106 (SCN4A)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
Na_trans_assoc
PKD_channel
IQ
GPHH
Motif
Other DBs
NCBI-GeneID:
113489106
NCBI-ProteinID:
XP_026720421
LinkDB
All DBs
Position
27
AA seq
1778 aa
AA seq
DB search
MAGLLHIPGPEHLRPFTPASLAAIKQRIAEAKALKIKRQQVELPEEEEIKPRSDLEAGKN
LPLIYGDPPLELIGTPLEDLDPFYKDKKTFIVLNKGKSIFRFSATPALYLLGPFHPIRRG
AIKVLIHSYPCFLXCFKLFSMVIMITILTNCVFMTMSNPPAWSKNVEYTFTGIYTFESLI
KILSRGFCIDSFTFLRDPWNWLDFMVISMAYITEFVDLGNISALRTFRVLRALKTITVIP
GLKTIVGALIQSVKKLSDVMILTVFCLSVFALIGLQLFMGNLRQKCVRWPPLNDTLLGDL
GLNNDTLANATLYGNFTDGITSNFTSNFTSNSTFDFEAYINDEANFYFLDGALDALLCGN
SSDAGKCPEGYQCMKAGRNPNYGYTSYDTFSWAFLALFRLMTQDFWENLFQLLQDRRSSG
SSLPSSTAEKERDSDLNSDQDKAKNCNGQVVPKVVLQRSATVIDFNPTNEPEKSDHNHLT
VGNQDGPGLEKRVGSAISVISNAVEELEEAHQKCPPWWYKFAHTFLVWNCCPPWLKLKEF
VKLVVMDPFVDLGITICIVLNTLFMAMEHYPMTEEFENVLSVGNLVFTGIFTAEMVLKLI
ALDPYEYFQQGWNIFDSIIVTLSLVELGLANVQGLSVLRSFRLLRVFKLAKSWPTLNMLI
KIIGNSVGALGNLTLVLAIIVFIFAVVGMQLFGKSYIECVCKISVDCTLPRWHMNDFFHS
FLIVFRILCGEWIETMWDCMEVAGQTMCLIVFMMVMVIGNLVVLNLFLALLLSSFSADSL
AASDDDGEMNNLQIAIGRISRGIDFVKTSVLMLLRRLWKGKKVAPEEEQEPNKRDNSVLN
HVDTGQEPKSEYLDGVTGKEHFFMDELDHMNFINNPNLTVQVPIASEESDLYEETSTQSD
TEDTKNPLSSDNASSLCSTVDYKPPPPEEEEVAEEAEASNEPEDCFTEACVKRFPCLYVD
ITSDRGKVWWNIRKTCFRIVEHDWFETFIVFMILLSSGALAFEDIYIEQRKVIRTILEYA
DKVFSYIFVIEMLLKWVAYGFKVYFTNAWCWLDFLIVDVSIISLTANWLGYSELGAIKSL
RTLRALRPLRALSRFEGMRVVVNALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKYYR
CINTTSGEIFDISVVNNRSDCMALLHTNEVRWVNVKVNFDNVGLGYLSLLQVATFKGWMD
IMYAAVDSREIEEQPMYEINIYMYIYFVIFIIFGAFFTLNLFIGVIIDNFNQQKKKFGGK
DIFMTEEQKKYYNAMKKLGSKKPQKPIPRPSNKFQGMVFDFVTKQVFDITIMILICLNMV
TMMVETDDQSELKTSVLYKINLVFIVIFTGECVLKMFALRYYYFTIGWNIFDFVVVILSI
LGIVLSDIIEKYFVSPTLFRVIRLARIGRVLRLIRGAKGIRTLLFALMMSLPALFNIGLL
LFLVMFIYSIFGMSNFAYVKKEAGIDDMFNFETFGNSIICLFQITTSAGWDGLLSPILNS
GPPDCDPHLENPGSSVKGDCGNPSIGIFFFCSYIIISFLIVVNMYIAIILENFSVATEES
SEPLCEDDFEMFYEIWEKFDPDATQFIAYSTLSDFVDTLQEPLKIPKPNKIKLITMDLPM
VAGDKIHCLDILFALTKEVLGDSGEMDALKATMEEKFMAANPSKVSYEPITTTLKRKHEE
VCATKIQRAFRRYLLRRSVKQASYMYRHSKDEDALREDAPEKEGLIATKMNEMYGNSGTD
VETAPAFDLAPVPSSETQDAPGEAKAWDKERVVKESLV
NT seq
5337 nt
NT seq
+upstream
nt +downstream
nt
atggccggcctgctacacattccgggccccgagcaccttcgccccttcacccccgcctcg
ttggctgccatcaagcagcgcatcgccgaggcaaaggcgctcaagataaagcggcagcaa
gtggagctgcccgaggaagaggagatcaagcccagaagtgacctggaagctggcaagaac
ctgcctctcatctatggtgacccaccactggagctcatcgggacccccttggaggacctg
gaccctttctacaaggataagaagacattcatagtcctcaacaaagggaagtccatcttc
cgcttctcagcaacccctgccctctacctgctggggcccttccaccccatccgcagagga
gccatcaaagtgcttatccattcatatccttgctttctgtgatgttttaaattattcagc
atggtcatcatgatcacgattttaaccaactgtgtgtttatgacgatgagcaaccccccg
gcatggtccaagaacgtggaatacactttcactgggatatacaccttcgagtccctcatc
aagatactgtcgagaggcttctgcatcgacagcttcacattcctgcgtgacccgtggaat
tggctggacttcatggtcatctccatggcctacattactgagttcgtggacctggggaac
atctctgctctcaggaccttccgtgtccttcgtgccttgaaaaccatcaccgtgatacca
gggctgaagacaatcgttggggctttgatccagtcggtgaagaagctctcggacgtcatg
atcctcactgtcttctgcctgagcgtgtttgccctgatcggtctccaactcttcatgggg
aacctccggcagaagtgtgtgcggtggccccccctcaacgacactctgctgggagacttg
gggctgaacaacgacacattggccaatgcaacactctacggcaacttcaccgatggcatc
accagcaacttcaccagcaacttcaccagcaatagcacctttgattttgaggcctacatc
aatgatgaagccaatttctactttctggatggagcgcttgatgccctgctgtgtgggaac
agcagtgatgctgggaagtgccctgaagggtaccagtgcatgaaggcgggcaggaacccg
aactacggctacaccagctacgataccttcagctgggctttcctggccctcttccgcctc
atgacgcaggacttctgggagaacctcttccagctgttgcaggaccggcggtccagcggc
agttccctgcccagcagcacggccgagaaggagcgcgactcggacctgaacagtgaccag
gacaaggcaaagaactgcaacgggcaagtggtccccaaggtcgtgctgcagcggtccgcc
acagtgattgatttcaatccaaccaatgagccggagaaatcagaccacaaccacctcact
gtgggcaaccaggatgggccaggcctggagaagagggtggggagcgccatcagcgtcatc
tccaatgctgtggaagagctggaggaagctcaccagaagtgcccaccttggtggtacaaa
tttgcccacacgttcctggtctggaactgctgtcccccctggctgaagctgaaggagttt
gtcaagctggtggtgatggaccccttcgtggacctgggcatcaccatctgcattgtgctc
aacacgctcttcatggccatggagcattaccccatgacggaggagtttgagaacgtgctc
tccgtggggaacctggtctttacggggatcttcactgcagagatggttctgaagctcatt
gctctggacccctacgagtatttccagcagggctggaacatctttgacagcatcatcgtc
accctgagcctggtggagctgggcctggccaatgtgcaagggctctccgtgctccgctcc
ttccgcttgctgagggttttcaagctcgccaagtcctggcccaccctcaacatgctcatc
aagatcatcggcaattcagtgggcgccctggggaacctcacgctggtgctggccatcatc
gtcttcatcttcgccgtggtggggatgcagctttttggaaagagctacatagagtgtgtg
tgcaagatctccgtcgactgcacgctgccccgctggcacatgaatgacttcttccactcc
ttcctcatcgtcttccgcatcctctgcggggagtggatcgagaccatgtgggactgcatg
gaggtggctggccagaccatgtgcctcatcgtcttcatgatggtcatggtcattgggaac
ctcgtggtgctgaatctgtttttagctttgctgctgagctccttcagcgccgatagcctg
gcagcatctgacgatgatggagagatgaacaatttgcagatcgctattggcaggatcagc
agggggatcgactttgtaaagacctctgtcctcatgctgctccgcaggctgtggaaaggg
aagaaggtagccccagaggaagagcaagagcccaataagagggacaactctgtgctaaac
catgtggacactggccaggagcccaagtcggagtacctggatggagtcactggcaaagag
cactttttcatggatgaactggaccacatgaatttcatcaacaaccccaacctgacggtg
caagtccccatcgcctcagaagagtctgacctctatgaggagacgagcacccagtctgac
actgaagacaccaagaatcccctctccagtgacaacgcgtcgtccctgtgcagcaccgtg
gattacaagcccccgccaccggaggaggaggaagtggcagaagaggctgaggccagcaac
gagcctgaggattgcttcaccgaagcctgtgtgaagaggtttccctgcctctacgtggac
atcaccagcgacagagggaaggtctggtggaacatccggaaaacctgcttccgcatcgtg
gaacacgactggttcgagaccttcatcgtcttcatgatcctcctcagcagtggggcgctg
gcttttgaggacatctacattgaacaacgaaaggtgatacgcaccatcctggagtacgct
gacaaggtcttctcctacatcttcgtcattgagatgttgctcaagtgggtggcctatggc
ttcaaggtatacttcaccaacgcatggtgctggctggatttcctcattgttgatgtttcc
atcatcagcctgacagcaaactggctgggatactctgagctaggagccatcaagtccctg
cggacactgagggctctgagaccactgcgtgccctgtccagatttgaaggcatgagggtg
gtggtgaatgccttgctgggcgccatcccttccatcatgaacgtcctgctggtctgcctc
atcttctggctgatattcagcattatgggggtgaacctctttgcagggaagtactatcga
tgcatcaacaccacctcaggggagatctttgacatcagtgtggtgaacaataggagcgac
tgcatggctctcctccacaccaacgaggtcagatgggtcaacgtcaaggtcaacttcgac
aacgtgggcttgggatacctctctttgctgcaggtggcaaccttcaaaggctggatggac
atcatgtatgctgccgtggactcacgcgagattgaagagcaaccgatgtatgagatcaac
atctacatgtacatctacttcgtcatcttcatcatctttggtgccttcttcaccctgaac
ctcttcattggtgtcataatcgacaacttcaaccagcagaagaaaaagtttggaggcaaa
gacatcttcatgacagaagagcagaagaaatactacaatgccatgaagaagctcggctcc
aagaaaccccagaagcccatccccaggccatcgaacaagtttcaagggatggtgtttgac
tttgttaccaagcaagtgtttgacataaccatcatgatcctgatctgtcttaacatggtg
accatgatggtcgaaacagatgatcaaagtgaactcaaaacatctgtcctctacaagata
aacctggtcttcatcgtcatcttcactggagagtgtgtactcaaaatgttcgccttgcgt
tactactacttcactattggctggaacatctttgactttgtggtggttatcctctccatc
ttaggtatcgtcctctcagatatcatagagaagtacttcgtatcacccaccctcttcagg
gtcatcaggctggcaaggattggccgtgtcctccggctgatccgaggggcaaaaggcatc
cgaactctcctctttgctctgatgatgtccctgcccgccctgttcaacattggtcttttg
cttttcctcgtcatgttcatctactccatctttgggatgtccaacttcgcctatgtgaag
aaggaggcggggatcgatgacatgttcaactttgaaacttttgggaacagcatcatttgc
ctcttccagatcaccacatcggctggatgggatggcctcctcagcccgatcctgaacagc
ggtccccctgactgtgacccccacctggaaaaccctggcagttcagtaaaaggggactgt
ggcaatccatccatcggcatcttcttcttctgcagctacatcatcatttcctttctcatt
gtggtgaacatgtacatcgccatcatcctggagaacttcagtgtggccacggaggagagc
agcgaacccctctgtgaagatgattttgaaatgttttatgaaatctgggagaagtttgac
ccggatgccacgcagttcattgcatacagcactttgtctgactttgtagacaccttacag
gagccactcaaaattcccaagccaaacaagatcaagctaatcaccatggatctaccaatg
gttgctggtgacaaaatccactgtctggatatcctctttgccctgactaaggaagtgctg
ggagactcaggagaaatggatgccttgaaggccaccatggaggagaagttcatggctgca
aacccctcaaaggtttcctatgaacccataaccaccactctgaaaaggaaacacgaggaa
gtctgtgctacaaaaatccagagggctttccggaggtacctcctgaggcgctcggtgaag
caggcctcctacatgtacaggcacagtaaggatgaagatgccctgagggaggacgcacct
gagaaggaaggtctgatcgccaccaaaatgaacgagatgtatgggaacagtgggacagat
gtggagacagcccctgcctttgatcttgcacccgttcccagctcagaaacacaagatgct
cctggagaagcaaaagcatgggataaggaacgcgttgtgaaagagtcgctggtataa
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integrated database retrieval system
