Anser cygnoides domesticus (swan goose): 106039464
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Entry
106039464 CDS
T04896
Symbol
VCAM1
Name
(RefSeq) vascular cell adhesion protein 1 isoform X1
KO
K06527
vascular cell adhesion molecule 1
Organism
acyg
Anser cygnoides domesticus (swan goose)
Pathway
acyg04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
acyg00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
106039464 (VCAM1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
acyg04090
]
106039464 (VCAM1)
04091 Lectins [BR:
acyg04091
]
106039464 (VCAM1)
CD molecules [BR:
acyg04090
]
Proteins
106039464 (VCAM1)
Lectins [BR:
acyg04091
]
I-type lectins (Siglecs)
106039464 (VCAM1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ig_3
ig
Ig_2
I-set
V-set
ICAM_N
C2-set
C2-set_2
C1-set
Ig_6
ICAM1_3_5_D2
Herpes_gE_N
Receptor_2B4
DUF2808
Syndecan
Motif
Other DBs
NCBI-GeneID:
106039464
NCBI-ProteinID:
XP_013042138
LinkDB
All DBs
Position
Unknown
AA seq
542 aa
AA seq
DB search
MLKKMGKINQAVLIILYVLITVKAFEMEIIPANRVVVQIGEMLVLTCNTTGCASPSFSWR
TQMDHPLGGTVNNYRTYSTLTMNPVSVENSHDYLCTVFCGGKEKKEKSIKVELYSFPNDP
VIEISTSLVAGEPATVICKIPEVYPSDHLEVLLMKEGHTLHEKNFFEDDSTNTETKTVTY
SFNFTTEDIGKEITCVAKLPIANMDFEPKERVTSLKLNANFGPQNTIITVSPSNLPVEGN
PLKLTCVTESNPPAQVVWRKHLADGNIEHFIENNVLSIPHARFTDSGLYICEVINLVTNK
TEKATVDIVIQAPPKNTTLSIFPSSVVKQGESVTISCTSADVPAVQITLRKKIGDVITTL
ETEDGKYTIDKAQLKDTGIYECISINKLGKQSQHIVLDVKVPPQNITVLVYPSENVKEGE
NVTITCSTYSNPPSQMVLKKVHQEREIILPSVNGTFTLYNVTKNDTGKYLLDVFNEVGNN
IKVIEIAVVGKLEKRDQMMPLIIAFSCTTAIAIPVVAILIYVSRKAKINGSYSLVEALRL
KV
NT seq
1629 nt
NT seq
+upstream
nt +downstream
nt
atgttaaaaaagatgggaaaaataaaccaagctgtgctaattattttgtatgtgttaata
actgttaaagcttttgaaatggagattatacctgctaacagagttgttgtacagattgga
gaaatgctcgtactcacatgcaatactactggctgtgcatcaccaagtttttcatggaga
acccagatggaccacccccttggaggaacagtgaacaattacaggacatactctaccttg
actatgaatccagttagcgttgagaattctcatgattatctgtgtactgtcttctgcggt
ggaaaagagaaaaaggagaagagtatcaaagttgaactttactctttccccaatgatcct
gtcattgagatcagcacatcattagttgctggagaaccagccactgtcatctgtaaaatt
cctgaagtgtatccttctgatcacctggaagtactcttaatgaaagagggacatactctt
catgagaaaaatttctttgaagacgacagcacaaatacagaaacaaaaactgtgacatac
tcatttaacttcacaactgaagatattgggaaagagattacttgtgtggccaaactacca
attgctaacatggactttgagcccaaagaaagagttacttctctgaaactgaatgcaaac
tttggtccacaaaatactatcattactgtatctccaagcaacttgccagtggaaggcaac
cctctaaaactcacttgtgtgacggagagtaatccaccagcacaagtagtttggagaaaa
catctggctgatggaaacattgagcattttatagaaaacaatgtcctttctattcctcat
gctcgtttcactgactcaggactgtacatctgtgaagtaattaatcttgtaactaataaa
acagaaaaagcaacagtcgacatcgttatacaagcgccaccaaaaaatacaacactttca
attttcccttcaagtgtggtgaagcaaggagaaagtgttaccatctcttgcacgtctgca
gatgttccagctgttcagattaccctaaggaagaaaataggtgatgtgatcacaaccctt
gaaacagaagatggcaaatacaccatagacaaggctcagctaaaggatacaggaatatat
gaatgcatatccattaacaaactcggaaagcagtctcagcacatagtacttgatgtcaaa
gttcctcctcaaaatattaccgtgttagtatatccatcagaaaatgttaaagaaggagaa
aatgtcactattacatgtagcacatacagtaacccaccgtcacagatggtcctgaaaaaa
gttcaccaagagagagaaattattctgccatcagtgaatggaacctttacgctctacaat
gtcaccaaaaacgatacaggcaaatatttgcttgatgttttcaatgaggttggaaacaat
atcaaagtgatagagatagctgttgtaggaaaattggaaaaaagagatcaaatgatgcca
ctgattattgcattctcttgcacaacagcaatagcgatacctgtggttgcaattttgatc
tacgtgtcaagaaaagcaaagataaatggatcctacagtcttgttgaagcactgaggctg
aaagtgtga
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