Alicycliphilus denitrificans BC: Alide_1321
Help
Entry
Alide_1321 CDS
T01397
Name
(GenBank) MiaB-like tRNA modifying enzyme YliG
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
adn
Alicycliphilus denitrificans BC
Brite
KEGG Orthology (KO) [BR:
adn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
adn03009
]
Alide_1321
Enzymes [BR:
adn01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
Alide_1321
Ribosome biogenesis [BR:
adn03009
]
Prokaryotic type
ribosomal protein modification factors
Alide_1321
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
TRAM_2
CLP1_P
Motif
Other DBs
NCBI-ProteinID:
ADU99082
LinkDB
All DBs
Position
1395526..1396917
Genome browser
AA seq
463 aa
AA seq
DB search
MSEALSPTKTPKIGFVSLGCPKNLTDSELILTQLSAEGYETSKTFQGADLVIVNTCGFID
DAVRESLDTIGEALADNGKVIVTGCLGARADDGGGNLVKGVHPNVLAVTGPHAAQEVMEH
VHQHLPKPHDPFLDLVPGTFGEAGIKLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSR
PIGDVLNEARALFEGGVKELLVVSQDTSAYGVDVKYRTGFWDGKPVRTRLLELVQTLGAI
ARPYGAWVRLHYVYPYPSVDDIIPLMQEGLVLPYLDVPFQHSHPDVLKRMKRPASGEKNL
ERIQRWREMCPELVVRSTFIAGFPGETEEEFEHLLQFLREAQIDRAGCFAYSNVRGAAAN
DLPGMLPMELREERRARFMAVAEEVSTARLQRRVGQTLQVLVDKAVGLGKKGGVGRSWAD
APEIDGLVHLLPPEKISKTYKVGDFVKVRIVGTQGHDLVGVPV
NT seq
1392 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaagcactctcccccacgaaaaccccgaagatcggcttcgtcagcctgggctgc
cccaagaacctgacggattccgaactcatcctcacgcagctctcggccgagggctacgaa
acctccaagactttccagggcgccgatctcgtcatcgtcaacacctgcggtttcatcgac
gatgccgtgcgcgagagcctggacaccatcggcgaggcgctggccgacaacggcaaggtg
atcgtcaccggctgcctgggcgcgcgcgcggacgacggcggcggcaacctcgtcaagggc
gtgcaccccaacgtgctcgccgtcaccggcccgcatgccgcgcaggaggtgatggagcac
gtgcaccagcatttgcccaagccgcacgaccccttcctggacctggtgcccggcacgttc
ggcgaggccggcatcaagctcacgccgcgccattacgcgtacctgaagatctcggagggc
tgcaaccaccgctgcaccttctgcatcattccctcgatgcgcggcgacctcgtgtcgcgc
cccatcggcgacgtgctcaacgaggccagggccttgttcgagggcggcgtgaaggagctg
ctcgtcgtgagccaggacacctcggcctacggcgtggacgtgaagtaccgcacgggcttc
tgggacggcaagccggtcaggacgcgactgctggagctcgtgcagaccctgggcgcgatc
gccagaccctacggcgcctgggtgcgcctgcactacgtctacccctatccgagcgtggac
gacatcatcccgctgatgcaggaggggctggtgctgccctacctggacgtgccgttccag
cacagccaccccgatgtcttgaagcgcatgaagcgcccggccagcggcgagaagaacctg
gagcgcatccagcgctggcgcgagatgtgccccgagctggtggtccgcagcaccttcatc
gcgggctttccgggcgagacggaggaagagttcgagcacctgctgcagttcctgcgcgag
gcgcagatcgaccgcgccggctgcttcgcgtacagcaacgtgcggggcgccgccgccaac
gacctgccgggcatgctgcccatggagctgcgcgaggagcgccgcgcgcgcttcatggcc
gtggccgaggaagtctccaccgcccggctgcagcggcgcgtgggccagaccctgcaggtg
ctggtggacaaggccgtgggcctgggcaagaagggcggcgtgggccgcagctgggccgac
gcgcccgagatcgacggcctggtccatctgctgccgcccgagaagatcagcaagacctac
aaggtgggcgacttcgtcaaggtgcgcatcgtgggcacgcaggggcacgacctggtgggc
gtgccggtctga
DBGET
integrated database retrieval system
