Apis dorsata (giant honeybee): 102672154
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Entry
102672154 CDS
T09121
Name
(RefSeq) probable DNA mismatch repair protein Msh6
KO
K08737
DNA mismatch repair protein MSH6
Organism
adr
Apis dorsata (giant honeybee)
Pathway
adr03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
adr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
102672154
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
adr03400
]
102672154
DNA repair and recombination proteins [BR:
adr03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
102672154
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
MutS_IV
MutS_II
AAA_22
Motif
Other DBs
NCBI-GeneID:
102672154
NCBI-ProteinID:
XP_006616033
EnsemblRapid:
LOC102672154
LinkDB
All DBs
Position
Unknown
AA seq
1129 aa
AA seq
DB search
MSKVNTLYNYFTSPKTPKTPKQSNNKQISDEKPTTPKRARGQLNKVKTPSKGKENKNLED
RKRIYKDDEEEEKEESEPIQTKKRRLIIPDEESGEDSGDEFKPDLDDESEESDSGSEGVS
ESEPPTASEEETPEKKRKLINSIGRKQQKGAKKNFKEDKKESKLQQQNQSQGSNNVIDSW
PHLKYDFLQPNKIRDINKKSPKDSDYDPKTLYVPLDFLNQQTPAMRQWWELKSKHFDCVL
FFKLGKFYELYHMDAVIGVNELHLTYMRGEFAHSGFPEIGYGRFSASLIERGYKVARVEQ
TENPDMMAQRVSNMIRPTKFDKVVKREICQITSKGTRVYTPQDIEPSTPNSNYLLSVIEK
CPSGSNISHYGVCFLDTTIGDFYLGQFEDDRCNSRLLTLLAHYPPVHVVYERGNLSQRTL
QIFNNNLAACIKESLLRESQFWSSSTTLKNLHEGDYFKKSDSEFQWPTGLQSYLNKNDSL
GLTPAEDKELAVHALGGCAYLLKEYLLEQQLLAQGRFKTYVPPDFSNKTFETSKFANNMV
LDAITINNLRIFGEGSLIKTLDRCCTAFGKRLLREWICRPSCRKNVIIERQEAIQELMDH
SEVVQTTRSILAGLPDLERLLSKIHAQGNPAKQNNHPDGRAIMFEGQTYSKKRIIDFITT
LNGFEDVLKVIALFEDFCSTLISKCTKVEPGGEFPSLRESLDYFKTAFDHEEAKKVGCIV
PKKGVDSEYDSVLMELEEIKKDSEQYLEKQKKHFGVKITFHGSDKKRYQIEIPDSQTKKV
GAGFELQSQRKGYKRYYTAESKELLSRQINAEEHRDKVLKDLNRRIFAQFSEKYDMWNMA
VYKLSVLDVLISLTEYALSGDMCVPEINDGTNEKIFIDIRDGRHPCIISDTFIPNDTLLA
TENFASFMILTGPNMGGKSTLMRQVALLTIMAQIGSYVPASSCRLTLVDRIFTRLGANDD
ILAGQSTFLVELSETSAILQHATPYSLVLLDELGRGTSTYDGTAIAAAVVNALTKLNCRT
LFSTHYHSLVEDYKNNKKITLAHMACMVENEEQDKVSQETVTFLYKLGEGACPKSYGFNA
ARLGGVPAVITSRAHEISKKLEKETNQKHFFTTLCKANGSTIRDLIAAM
NT seq
3390 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaaagtgaatacattatataattattttacatcgcctaaaactcctaaaacacct
aaacaatcaaataataaacagatatccgatgaaaaacctacaacaccgaaaagagcaagg
ggacaattgaacaaagttaaaactccaagtaaagggaaagaaaataaaaatcttgaagat
agaaaaagaatatacaaagatgatgaagaagaagaaaaggaagaaagtgaaccaattcaa
acaaaaaaacgaagactaattattcctgatgaagaatctggagaagattctggagatgaa
tttaaacctgacctagatgatgaatcagaagaatcagattcaggatctgaaggagttagt
gaaagtgaaccaccaactgcgagtgaagaagaaactccagagaaaaaacggaaacttatt
aattctattggaagaaaacaacaaaaaggtgcaaagaaaaatttcaaagaagataaaaaa
gaatcaaaacttcaacaacaaaatcaatcccaaggttcaaataatgttatagattcttgg
ccacatttaaagtatgattttcttcaaccaaataaaatacgagatattaataaaaaatcg
ccaaaagattcagattatgatcctaaaactctatatgttcctttggattttttaaatcaa
caaactccagctatgagacagtggtgggaattgaaaagtaaacattttgattgtgttctt
ttctttaagctaggaaaattttatgaattatatcatatggatgctgtaataggcgttaat
gaacttcatcttacctatatgagaggagaatttgcacattcgggatttcctgaaattgga
tatggccgtttctcggcgagtctcatagaaagaggatacaaagtggcgagagtagaacaa
acggaaaatccagatatgatggcacaacgtgttagcaatatgattagaccaacaaaattt
gataaagtagttaaaagagaaatttgccaaataacttctaaaggtacaagggtgtacact
ccacaagatatagaaccatctacaccgaattctaattatttattatcagtgattgaaaaa
tgcccatctggttctaacatatctcattatggagtctgtttcttagatactacaatagga
gatttttatcttggtcaatttgaagatgatcgatgtaattctagattattaactttactc
gctcattatcctccagttcatgttgtttatgaacgtggtaatttgtctcaaagaacatta
caaatttttaacaataatttagcagcatgtattaaagaatcacttttacgcgaatctcaa
ttttggtcatcttcgactacattaaaaaatcttcatgaaggagattattttaaaaaatca
gattctgaatttcaatggcctacaggcttacaatcatatcttaataaaaatgatagttta
ggtttaactcctgctgaagataaagaattagcagtacatgctttaggtggatgtgcatat
ttacttaaagaatatctgcttgaacaacaattattggcgcagggacgttttaaaacatat
gttcctccagatttttcaaataaaacatttgaaacttccaaatttgcaaataatatggtt
ttagatgctatcacgattaataatttgagaattttcggggaaggttctcttataaaaacg
ctagatcgttgttgtaccgcatttggaaaaagattgttacgagaatggatttgtagacca
tcttgccgaaaaaatgttataattgaacgtcaagaagctatacaagaattaatggatcat
tcagaagtagtacaaactactcgtagtatattagcagggcttcctgatcttgaaagatta
ttgagcaagattcatgctcaaggaaatccggcaaaacaaaataatcatcctgatggcaga
gctatcatgtttgaggggcaaacgtattcaaagaaaagaattatagattttattactact
ttgaatggttttgaagatgtcttaaaagtaattgctttatttgaagatttctgtagcacc
ttaataagcaaatgtactaaagtggaaccaggtggtgaatttccttcattaagagaatct
ttagattattttaagactgcattcgaccatgaagaagccaaaaaagtaggttgtattgtt
ccaaagaaaggagtcgattccgaatatgattctgttttaatggaacttgaggaaataaaa
aaagattcagaacaatatcttgaaaagcaaaaaaaacactttggggtaaaaatcacgttt
catggttcggataaaaaacgttatcagatcgagattccagattctcaaacaaaaaaagtt
ggtgctggatttgaactgcaatcacaaagaaaaggatacaaacgttattatactgcagaa
tcaaaggaacttttaagtcgacaaataaatgccgaagagcatagagataaagtattgaag
gatttaaatagaagaatatttgcacaatttagcgaaaaatatgatatgtggaatatggca
gtttataaattgtctgttttagatgttcttatttctttaacagaatacgctctcagtggt
gatatgtgtgtaccggaaattaatgatggtacaaatgaaaagatatttattgatattcga
gacggacgacatccatgtattatttcagatacatttataccaaatgatactttattagca
actgaaaatttcgcttctttcatgattctcactggaccaaatatgggtggtaaatcaaca
ttgatgcgtcaggttgcccttctcactataatggcacaaattggaagttatgttcctgca
agttcctgtcgtttaacattagtagatcgtattttcacgagattgggagcaaatgacgat
attttggctggtcagagtacattcttagtagaattaagcgaaacttctgcaatattacag
catgctacaccatattctctcgtattactcgatgaattaggacgtggtacatcgacgtat
gatggtacggcaattgctgctgcagttgtaaatgcacttacaaaattaaactgtcgtact
ttattttcgacgcattatcattctttggtagaagattataaaaataataagaaaattaca
ttagctcatatggcatgcatggtagaaaatgaggaacaagataaagtatcccaagaaaca
gtaacatttttatacaaactcggcgaaggagcttgtccgaaatcatatggtttcaacgct
gcccgattaggtggtgttccagctgtaattacaagtagagcacatgagatttcaaagaaa
ctcgaaaaagaaacaaatcaaaaacatttctttactactttgtgtaaagcgaatggttca
actataagggatctaattgctgcaatgtga
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