Arachis duranensis: 107466589
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Entry
107466589 CDS
T04300
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB1-like
KO
K03006
DNA-directed RNA polymerase II subunit RPB1 [EC:
2.7.7.6
]
Organism
adu
Arachis duranensis
Pathway
adu03020
RNA polymerase
adu03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
adu00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
107466589
09124 Replication and repair
03420 Nucleotide excision repair
107466589
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
adu03021
]
107466589
03400 DNA repair and recombination proteins [BR:
adu03400
]
107466589
Enzymes [BR:
adu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
107466589
Transcription machinery [BR:
adu03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
107466589
DNA repair and recombination proteins [BR:
adu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
107466589
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_6
RNA_pol_Rpb1_3
RNA_pol_Rpb1_7
RNA_pol_Rpb1_4
Motif
Other DBs
NCBI-GeneID:
107466589
NCBI-ProteinID:
XP_015941075
UniProt:
A0A6P4BPL2
LinkDB
All DBs
Position
9:complement(104551266..104557469)
Genome browser
AA seq
1455 aa
AA seq
DB search
MDIRFSFPYSPAETAKVRALRFQILSPDDIRRMSVVEIEHGIENPKVGGLSDPRLGTVHK
NIDCDTCGADMDHCPGHFGHLELAKPVFHVGLLNTVLAVMRCVCFNCSKILSGQNNKEFK
QALKITNPKSRLEMMVNACKNKSFCEGDDGDFEDPIREGHDGCGARQPKLTINGMKMIAE
HKIPRKKEILSAEKVLDILKGISDEDCQLLGLNTQYVRPEWMILQVLPIPPPSVRPSVMI
DASSRIEDDLTHQLVRIIRSNKNLKSHESNGSPARVISKFAQLLEFHIATYFDSALPGLP
RAAKKRPIKSICSRHKEDDGQIRGMLGKRVDFSARTLITPDPNINIDEVGVPRSIALNLT
YPETVTPYNITRLKELVEYGPDPPPGKTGAKYIIRDNGQRLDLRYLEKSSDLHLEIGYKV
ERHLEDGDLVLLNRRPSLHKMSIMGHKIKILPYSTFRLNMLVTKPYNVNFDGDEMDMHVP
QSFETRTEVLELMMVPKCIVSPQSNRPVMDIVQDTLLGCRKITKRDTFITKDVFMNILMW
WEDFDGKVPAPAILKPEPLWTGKQVLNLIIPKQINLTGYSSWHDHMESGSSISPGDTVVR
IEKGELLTGTLCKETLGTFTGRLVHAIWVDVGPDASRKFLGHIQWLVNYWLLQNSFSIGI
GDTIADASTMEFFNRNISEAKKKVKYLIRDAQEQKLEAKPGSTMMDTHTLEKKVIDVLIQ
AHEDAIEKVKMSLSESNNLKAMVTAGSKGSFINISQMTACLGQQNVEGKRIPFGFTDRTL
PHFVKDDYGTESRGFVENSYLHGLSPQDFFFHAMGSREGFIDNAVRVYETGYIQRQLVKA
LEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIETQNLDSLKMKKSDFNRTFRYEFDNE
NWNPSYMLEGPIEELKTSIELRTALEAEVLKLACDRCQLATEITCNSSLPLPVNLKRLIR
NAQKAFKIDFQKPSDMHPLEILEAVDRLQERLKVVPGNDLVSQEAQKNATLLFNILLRST
LASKRILQEYRLSREAFEWVVGEIESRFQQSLVTAGEMTGCVAAQSIGDLATKLTLETFH
YVGLGAKNVTLGVPRLREIIKTARRIQTPSLSVHLNPGSGVTSENVKRVQCDLEHTTLRR
VTHTAEVWYDPEPMSTIIEEDVDFVKSHFETPDEEVALEGISPWLLRIELDREMMVDKKL
SMAGIAEKINLMFNGDLECIFNDDTAEKLVLRFRIMNNEAHPGEIQDGSADSVFLKIIGS
NMLSEMTLRGIPGINKVFMKAIDVQKFNEEDGFQNHKEWMLETEGVNLLAVMCHEHVDAA
RTTSNHLIEIIKVLGIEAVRRALLDELRAVMSFDGFYVNYRHLALLCDTMTYRGHLMAIT
RNGVDRNDAGPMMRFSFEETVNVLHDATVYAETDHLRGIRENNMLGLLAPFGTGQCALYP
NQDMLKNSNELQLPS
NT seq
4368 nt
NT seq
+upstream
nt +downstream
nt
atggatattaggttttccttcccttactctccggcggaaaccgcaaaggtccgagcgctt
cgcttccaaattctcagccccgacgatattaggcgaatgtctgtggttgaaatcgagcat
gggattgagaacccaaaggttggagggttaagcgatccgcgccttggaaccgttcataag
aacatcgattgtgacacgtgtggggctgatatggatcactgcccggggcatttcggtcac
ttggagctcgctaagccagtgtttcacgtcggtttattgaatactgtcctcgctgtaatg
cgttgcgtctgcttcaactgttccaaaattttatccggtcagaacaacaaagagtttaag
caagctttgaagattacaaacccaaaaagtaggttggaaatgatggtgaatgcctgcaaa
aacaaaagcttttgtgaaggtgatgacggagattttgaggatcctattagagagggtcat
gatggctgtggtgctcggcagcccaagttaactattaacggtatgaagatgattgcggag
cataaaattccgaggaagaaagagattctttctgctgagaaggttcttgatattctaaag
gggataagtgatgaggactgccagttgctgggcttgaatactcagtatgtacgtcctgaa
tggatgattttgcaagttcttccaattcctcctccatccgtgagaccttctgttatgatc
gacgcatcctctaggattgaggacgacttaactcatcagttggtcaggattatcaggtcc
aataagaatttgaagtcacatgagagtaatggatcacctgcgcgtgttatttctaagttt
gctcagttgttggagtttcacattgccacttattttgatagtgcgttgcctgggctcccg
agagctgctaaaaaaaggcctatcaaatcaatatgtagcaggcataaagaagatgatggt
cagattagaggaatgttggggaaaagagttgatttttctgctcgaacactaattacacca
gaccccaacattaatattgatgaagtgggagtaccacggagtattgctttgaaccttaca
tacccagagactgtaactccatataacatcacaaggttgaaagaacttgtagagtatgga
cctgatcctccacctgggaaaactggtgccaaatacatcattcgtgataatgggcaaagg
cttgatctcagatatttggagaaaagtagcgatctccatttggagattggatacaaggta
gaacgtcatttagaggatggagatcttgtactcttgaatcgccgacccagtcttcacaaa
atgtctatcatggggcacaaaatcaaaatcttgccttattctacgttcaggcttaacatg
ttggtaactaaaccatataatgtaaattttgatggggatgaaatggatatgcatgttcct
cagtcatttgaaaccaggacagaggtgttggagctcatgatggtgcctaaatgcattgtg
tcacctcaatcaaataggccagtaatggatattgtccaagatacacttttaggatgcaga
aaaatcaccaagagagataccttcatcacgaaggatgtttttatgaacattctgatgtgg
tgggaggattttgacgggaaagttcctgctccagcaatattgaagccagagccattgtgg
actggaaaacaagttttgaatcttatcattcccaaacaaataaatttaactgggtattct
agctggcatgatcatatggaaagtggttcatcaataagccctggggatactgtggtccga
attgaaaaaggggaactacttactggaactctttgcaaagagacacttggaacatttact
ggacgtctcgttcatgccatttgggtagatgttggtcctgatgcatctcgtaaatttctt
ggtcatattcagtggcttgtaaactactggcttctgcagaattctttcagcattggaatc
ggtgatacaatagctgatgcatcaactatggagttttttaataggaatatttcagaggca
aagaagaaagtaaaatacttgatcagggatgctcaagaacagaagttggaagctaaacct
ggatcgacaatgatggatacacatacactcgagaagaaagtgattgatgtgctgatacaa
gctcatgaagatgccatagaaaaagtgaagatgagtttatctgagagcaataatctgaaa
gcaatggtgacagctggttccaaaggaagttttatcaacatatctcagatgactgcttgt
cttggtcaacagaatgttgagggcaagcgaattccatttgggtttacagataggacattg
ccgcattttgtaaaagacgattatgggactgaaagccgaggctttgtggagaactcatat
ctccatgggctaagcccgcaagatttctttttccatgccatgggaagtagggaaggattt
attgataatgcagtgagggtatatgaaactggatacatccagaggcagcttgtgaaggct
ttggaggatatcatggtcaaatatgatggaactgttaggaactctttaggagatgtcata
caatttctctatggagaagatggtatggatgctgtttggattgaaacacagaatcttgat
tccctgaaaatgaaaaagtcagacttcaataggacctttaggtatgagtttgataatgag
aactggaatcctagttacatgcttgaagggcccattgaagaattgaaaaccagcatagag
cttcgtactgcacttgaagctgaagttttaaagcttgcgtgtgatagatgtcaacttgca
actgagattacttgtaacagttctctaccactgcctgttaaccttaagaggcttatcagg
aatgctcagaaggctttcaagattgactttcagaaaccttctgatatgcacccactggaa
attctagaagctgttgataggctgcaggagagactcaaggttgttcctggtaatgatctt
gtgagtcaagaagcacagaagaatgctactctcctattcaatatcctgttgcgcagtact
ctagccagtaaaaggattctgcaggaatataggctttcccgtgaggcatttgagtgggta
gtgggagagatagaatcaaggttccagcagtcacttgtaactgctggggaaatgactggt
tgtgtggcagcacaatcaattggtgatcttgctactaaattgactctcgaaacattccat
tatgttggtttaggtgctaagaatgttacacttggcgttcccaggttaagggaaatcatt
aaaacagctaggagaattcaaacgccttccttgtctgtgcatttgaaccctgggtcaggt
gtaacttcggaaaatgttaagagagtgcagtgtgatttagagcatactactcttaggaga
gtgacccacactgcagaggtgtggtacgatccagaaccaatgagtacgataattgaagaa
gatgttgattttgtgaagtcccactttgaaacgcctgatgaagaagttgctctcgaagga
atctcaccttggttgcttcgcatagaactggaccgtgagatgatggtggataagaagttg
agtatggctggcattgctgagaagatcaaccttatgtttaatggtgatttggaatgtatt
ttcaatgatgacactgctgaaaaacttgtacttcgtttccgaattatgaataatgaagct
cacccaggagagatacaggatggttctgctgacagcgttttcttaaagataataggaagc
aacatgctgagtgaaatgaccttacgtggcatcccaggcatcaacaaggttttcatgaaa
gccattgatgttcagaagtttaacgaagaagacggtttccagaatcataaggaatggatg
cttgaaactgaaggtgtcaacctgttggctgtaatgtgccatgaacatgttgatgcagca
aggactacaagcaaccacttaattgaaattattaaagtccttggaattgaggcagttcgg
cgtgctctcctggatgaattgcgggctgtcatgtcttttgatggattttatgtcaattac
aggcatttggcgttgctgtgtgatacaatgacttatcgtgggcatttgatggcaattaca
cgcaatggtgtcgaccggaatgatgctggaccaatgatgagattctcatttgaagagaca
gtcaatgttctccatgatgctactgtatatgctgaaactgatcacttgaggggtatcagg
gaaaataacatgttaggcctgcttgcaccctttggcactggacaatgtgctctgtatccc
aatcaagacatgcttaagaattctaatgagctccagctacctagttaa
DBGET
integrated database retrieval system
