Arachis duranensis: 107492196
Help
Entry
107492196 CDS
T04300
Name
(RefSeq) polygalacturonase At1g48100-like
KO
K01213
galacturan 1,4-alpha-galacturonidase [EC:
3.2.1.67
]
Organism
adu
Arachis duranensis
Pathway
adu00040
Pentose and glucuronate interconversions
adu01100
Metabolic pathways
Module
adu_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
adu00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
107492196
Enzymes [BR:
adu01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.67 galacturonan 1,4-alpha-galacturonidase
107492196
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_28
Pectate_lyase_3
Beta_helix
Motif
Other DBs
NCBI-GeneID:
107492196
NCBI-ProteinID:
XP_015968676
UniProt:
A0A6P4DI51
LinkDB
All DBs
Position
6:complement(5794693..5796835)
Genome browser
AA seq
450 aa
AA seq
DB search
MIFFLFRTQVFLILVICLLFLPIYGRLSMSLVSFSPSPSPEGTGEIVERSLVFDVRSFGA
VGDGVSDDTQAFQLAWDTACRAEESRILLVPKGNVFMIQSTIFTGPCVSGLTFKVEGTIM
PPDGPDSWPKNKSKKQWLVFYRINGLTMKGGGLIDGRGEKWWNLPCKPHKGINGTTLPGP
CDSPVAIRFFMSSNLRIEGLKIKNSPKFHFRFEDCQNVHIEKLIIRSPALSPNTDGIHIE
NTNNVRIYNSLISNGDDCVSIGAGCYNVDIKNIKCGPSHGISIGSLGNYNSRACVWNITV
SESVIKNSDNGVRIKTWQGGRGSVSMVTFESMHMDNVRNPIIIDQYYCPLKNCINQTSAV
SVSNVSYSNIRGTYDFRSFPMRFACSDSVPCTDIMLSQVELFPSQQGHILTNPFCWNVYG
TVSTLTTPPLLCLQAGPPLMLPQHDVVPCY
NT seq
1353 nt
NT seq
+upstream
nt +downstream
nt
atgatattctttctgttcagaactcaagttttcttaatattagtaatatgtttgttattt
ctcccaatttatggtaggctttcaatgtcccttgtctcattctctccttctccatcacct
gagggaactggtgaaattgtcgaaagatctcttgttttcgatgtaagatcttttggtgca
gttggggatggtgtctctgatgatacacaagcatttcagttggcttgggacacagcatgt
cgagccgaagaatcgcgaattctccttgttcccaagggtaatgtcttcatgatacaatct
actatattcacagggccttgtgtatctggccttacttttaaggttgaaggtactattatg
ccacccgatggacctgattcatggccgaagaataaaagcaagaaacaatggctggttttc
tatagaatcaatggattgacaatgaagggaggtggtcttattgatggcaggggagagaaa
tggtggaacctcccttgcaagcctcacaaaggtattaatggaacaacactaccaggtcca
tgtgatagtcctgtggccataaggttctttatgagttctaatttgagaatagaaggacta
aaaattaagaacagtccaaaattccatttcagatttgaagattgccaaaatgtacatatt
gaaaagcttatcataagatcacctgctctgagccccaacactgatgggattcacattgag
aacacaaacaatgttaggatttacaattcactcatttccaatggtgatgactgtgtgtcc
attggagccggttgttacaatgtggacatcaagaatatcaagtgtggtccaagtcatgga
attagcattgggagcctagggaactacaactcgcgagcttgtgtgtggaacatcacagtg
agtgagtcagttattaagaactctgataatggtgttcggatcaaaacatggcaaggtgga
agaggttcagtgtcaatggtaaccttcgagagcatgcacatggacaatgtccgcaaccca
atcatcatagaccaatactattgccccttaaagaactgcatcaaccaaacctctgcggtt
tcagtgtccaatgtgtcatactcaaacataagaggcacttacgatttcagaagcttccct
atgcgctttgcatgcagtgattctgttccatgcacagatattatgctttctcaagtggaa
ttgtttccttcacaacaaggccatattttgaccaaccccttttgctggaatgtttatggc
actgtgagcacactgacaacaccaccacttttatgccttcaagcgggacctccattaatg
ctgcctcaacatgatgttgtgccgtgttattag
DBGET
integrated database retrieval system
