Arachis duranensis: 107495569
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Entry
107495569 CDS
T04300
Name
(RefSeq) LOW QUALITY PROTEIN: DNA-directed RNA polymerase II subunit RPB1-like
KO
K03006
DNA-directed RNA polymerase II subunit RPB1 [EC:
2.7.7.6
]
Organism
adu
Arachis duranensis
Pathway
adu03020
RNA polymerase
adu03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
adu00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
107495569
09124 Replication and repair
03420 Nucleotide excision repair
107495569
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
adu03021
]
107495569
03400 DNA repair and recombination proteins [BR:
adu03400
]
107495569
Enzymes [BR:
adu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
107495569
Transcription machinery [BR:
adu03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
107495569
DNA repair and recombination proteins [BR:
adu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
107495569
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_6
RNA_pol_Rpb1_7
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Endotoxin_C2
MIF4G_like_2
Motif
Other DBs
NCBI-GeneID:
107495569
NCBI-ProteinID:
XP_052115067
UniProt:
A0A9C6WGU6
LinkDB
All DBs
Position
3:complement(10691993..10699863)
Genome browser
AA seq
1743 aa
AA seq
DB search
MDIRFPYSPAETANVRTVQFGILSPDEIRRNSVVEIEHGESSEKGKPKVGGLSDPRLGTV
DRKIRCATCTADMAECPGHFGHMELAKPMFHVGFLKTVLTVMRCVCFNCSKILVREVRFQ
MFXEPCIELIGGRSLVAFVQFEFYLNSCLVVXLFKLTMVLEQDKKFEQALKIGNPKNRLK
RILDACKNISKCQGGEDSEELVRIGCGALQPKITIDGMNMIAEYKALRNKNNDHEQLPEP
EERKQILSAERVLGVLKRISDGDCELLGLNPQFARPDWMILQVLPIPPPPVRPSVMMHSS
CRCEESDDLTHQLATIIKHNENLKRHEKNGSPQHIVSEFSKLLQFHITTYFDNELPGLPR
ATQRTGRPIKSICSRLKAKEGRIRGNLMGKRVDFSARTVITPDPNINIDELGVPWSIALN
LTYPETVTPYNIERLKELVEYGPNPPPGKTGAKYIIRDDGQRLDLRYLKKSCHPHLEIGY
KVERHLMDADLVLFNRQPSLHKMSIMGHRIKIMPYSTFRLNLSVTKPYNADFDGDEMNMH
VPQSFETRAEVLELMMVPKCIVSPQSNRPVMDIVQDTLLGCRKITKRDTFITKDVFMNIL
MWWEDFDGNVPTPAILKPEPLWTGKQVFNLIIPKQINLTRYSSWHDDNEGGSSITPGDTM
VRIEKGELLTGTLCKKTLGASTGSLIHVIWEDAGPDAARKFLGHTQWLVNYWLLQNSFSI
GIGDSIADASTMEVINQTISEAKEKVKKLFRDAQEKKLESEPGQTMMDTFEKKVNEVLNE
ARNDAGKKAQTSLSESNNLKAMVTAGSKGSFINISQMTACLGQQNVEGKRIPFGFIDRTL
PHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGREGIIDTAVKTSETGYIQRRLVKA
MEDIMVKYDGTVRNSVGDVIQFLYGEDGMDAVWIETQNLDSLKMKKSDFDRTFTYEFDKE
NWNPSYMLEGPIKDLKSSIELRNVLEAEVEMLEHDRHLLATGIATTGASSLPLPVNLKRL
IRNAQKTFKIDFRMPSDMDPIEIVEAVDKLQERLKVVPGDDLLSQEAQKNATLLFNILLR
STFASKRVLEEHRLSREAFEWLVGEIESRFLQSLVASGEMIGCVAAQSIGEPATQMTLNT
FHYAMTLNTFHYAGVSAKNVTLGVPRLTEIINVAKRIKTPSLSVYLKPEVSRTSEEAKRV
QCDLELTTLRRVTQATEVWYDPDPLYTVIEEDVDFVKLYNEMPDEEVALERMSPWLLRIE
LNREMMVDKKLSMADIAEEIKHVFDDDLKCIFNDDNAEKLILRIRIMNDEAHRGEIQDDS
ADDVFLKRIESNMLTEMTLRGISGISKVFIKSIDVPKFDDNEGFQTHKEWMLETEGVNLL
AAMCHEQVDATRTISNHLIEIIEVLGIEAVRRALLNELRAVISFDGSYVNYRHLAVLCDT
MTYRGHLMSITRHGINRNDTGPMMRCSFEETVDILLDAAAYAEADHLRGVSENIMLGQLA
PLGTGQCSLYLNDEMIKNAFDLQLPGYMDGLDFGMTPAHFSMSTPYLDGLMSPTHLSSPN
LRPSPINNAVFSPYGMACGYSAYRSDYSISSPAYDPVSPKYTPTDPGYSPVSPSYSPLSP
TYSPVSPTYSPISPAYSPLSPGYSPTSPSYSPISPAYSPSSPGYSPTSPSYSPTSPYHSR
LSAEYSPTSPYYSPTSPSYSPSSPTFSPSSLDFSLTSPQFSASMEYSPSRPGYSPASTSQ
YTP
NT seq
5232 nt
NT seq
+upstream
nt +downstream
nt
atggatattaggtttccttattcgccggcggaaactgcaaatgtccgtacggttcagttc
ggaattctcagccccgatgaaatcaggagaaactctgtggtggaaatcgagcacggggag
agctcggaaaaggggaagccaaaggtcggagggttgagcgaccctcgccttggaaccgtt
gataggaagatccggtgtgccacgtgtacggctgatatggctgagtgcccggggcatttc
ggtcacatggagctcgctaagccaatgtttcacgttggtttcttgaagacggtgctcacc
gtcatgcgttgtgtttgcttcaactgctccaaaattttggtgcgtgaggtccgatttcaa
atgttttgagaaccatgcattgagttaataggaggaaggagcttagttgcttttgttcaa
tttgaattttatctgaattcttgtttagtagtcnntctttttaagttgactatggttttg
gagcaggataagaagtttgaacaagctttgaagattgggaaccctaaaaacaggctgaag
aggatcttggatgcttgcaaaaacataagcaagtgtcaaggtggtgaagattctgaggag
ctggttcgaattggctgcggtgccttgcagcccaagattactattgacggtatgaacatg
attgctgagtataaggctctgaggaacaaaaacaatgaccatgaacagcttcctgaacct
gaagaaaggaaacagattctttctgcagaaagagttcttggtgttctaaaaaggataagc
gacggggactgcgaattgttgggcttgaatccgcagtttgcccgtcctgattggatgatc
ttgcaagttcttccaattcctcctccaccagtgagaccttctgttatgatgcactcatcc
tgtaggtgtgaggaaagtgatgacttgactcatcagttagccacaatcatcaagcacaat
gaaaatttgaagagacatgagaaaaatggatcacctcagcatattgtttcagagttttct
aagttgttgcagttccatataaccacatattttgataacgagttgccgggactgccaaga
gctactcaaagaacaggaaggcctatcaaatcaatttgtagcaggcttaaagccaaagaa
ggtcggattagaggaaatttgatggggaaaagagttgatttttctgctcgaacggttatt
acaccagacccgaacattaacattgatgaactcggagtgccatggagtattgctttgaac
cttacataccctgagactgtaactccatataatattgaaaggttgaaggagcttgtagag
tatggacccaatcccccacctgggaaaactggtgccaagtacatcattcgtgatgatggg
caaaggcttgatctcagatatttgaagaaaagttgccatccccatttggagataggatac
aaggtggagcgccatttgatggacgcagacttagttctcttcaatcgtcagcctagtctt
cataaaatgtccattatggggcacagaatcaaaatcatgccttattctacgtttcggctt
aatttgtcggtaactaagccttataatgctgattttgatggggatgaaatgaacatgcat
gttcctcagtcatttgaaaccagagcagaggtgttggagctcatgatggtgcctaaatgc
attgtgtctcctcaatcaaacagaccagtaatggatattgttcaagacacactattagga
tgcagaaaaatcaccaagagagataccttcatcacaaaggatgtatttatgaacattcta
atgtggtgggaagatttcgacgggaatgttcctacaccagcaatattgaagccagaacca
ttgtggactgggaaacaagttttcaatcttattattcccaagcaaataaatttaactagg
tattctagctggcatgatgataacgaaggaggatcatcaataactccaggggatactatg
gtcagaattgaaaaaggggaactacttaccggaactctttgcaaaaagacacttggagca
tctactggaagtctcattcatgtcatttgggaagacgctggccccgatgcagctcgtaaa
tttcttggtcacactcagtggcttgtaaactactggcttctgcagaattcttttagcatt
ggaattggtgattcgattgcagacgcttcgactatggaggttattaaccagactatttca
gaggcaaaggagaaagtgaaaaaactattcagggatgctcaagaaaagaagttggagtct
gaacccggtcagacaatgatggacacatttgagaagaaagtgaatgaggtgctgaacgaa
gctcgtaatgatgccgggaaaaaagcgcagacaagtttatctgagagcaataatctgaaa
gcaatggtgacagctggttccaaaggaagttttatcaacatatctcagatgactgcttgt
cttggtcaacagaatgttgaaggcaagcgaattccatttgggttcatagataggacactg
ccacactttacaaaagatgattatgggcctgaaagccgaggctttgtggagaactcgtat
cttcgagggctgaccccacaagagttctttttccacgccatgggaggtagggaaggtatt
attgatactgcagtgaagacctctgaaactggatacatccaaaggcggcttgtgaaggct
atggaggatattatggtcaaatacgatggaactgttaggaactccgtgggagatgtcata
caatttctctatggagaagatggtatggatgctgtttggattgaaacacagaatcttgat
tccctgaaaatgaaaaagtcagactttgataggacctttacgtatgagtttgataaggag
aactggaatcctagttacatgcttgaagggcctattaaagacttgaaatccagcatagag
cttcgtaatgtacttgaggctgaagttgaaatgcttgaacatgatagacatctgcttgca
actgggattgccactactggtgctagttctcttccactgcctgttaaccttaagaggctt
atcaggaatgctcagaagacatttaagatcgactttcgaatgccttctgatatggacccg
attgaaattgtagaagctgttgataagctacaggagagacttaaagttgttcctggtgat
gatctccttagtcaagaagctcagaagaatgctactctcttgttcaatattttgctccgc
agcacttttgctagtaaacgtgtcttggaagaacataggctctctcgtgaggcatttgag
tggctagtgggagaaatagaatcaaggttcctgcagtcacttgtagcctctggggaaatg
attggttgtgtagcagcgcaatcaattggtgagcctgctactcagatgactctcaacacc
ttccactatgctatgactctcaacacattccactatgctggtgtaagtgctaagaatgtt
acacttggtgttcccaggttaacagaaattataaatgtggccaagagaatcaaaacacct
tccttgtctgtgtatttgaaacctgaggttagtaggacttcagaggaggccaaacgtgtg
cagtgtgatttagagcttactacacttaggagagtgacacaagctacagaggtgtggtat
gatccagacccattgtatactgtaattgaagaagatgttgattttgtgaagttgtacaat
gaaatgcctgatgaagaagttgctcttgaaagaatgtcaccttggttgcttcgcatagaa
ttgaaccgagagatgatggtggataagaagttgagcatggctgacattgctgaggagata
aaacatgtgtttgatgatgatttgaaatgtattttcaatgatgacaatgctgaaaagctc
atacttcgtatccgaatcatgaatgatgaagcccaccggggagagattcaggatgattct
gctgatgatgttttcttaaagagaatagaaagcaacatgcttactgagatgacattacgt
ggcatctctggcatcagcaaggtttttataaaaagtattgacgttccaaaatttgatgac
aatgaaggttttcagactcataaggaatggatgcttgaaactgaaggtgtcaacctttta
gctgcaatgtgccatgagcaagttgatgcaacaaggaccataagcaaccaccttattgaa
attattgaagtccttggaattgaggcagttcggcgggctcttctgaatgaattgcgtgct
gtcatctcttttgatggatcttatgtcaattacaggcatctcgctgttctttgtgatact
atgacttatcgtggccatttgatgtcaattacgcgccatggtatcaaccgaaatgatacc
ggtccaatgatgagatgctcatttgaagagactgttgatattctccttgatgctgcagca
tatgctgaggctgatcacttaaggggtgtcagcgaaaacatcatgttaggccagcttgcg
ccccttggcactggacaatgctctctgtatcttaatgatgagatgattaagaatgcattt
gatctccagctacctggttatatggatggtcttgactttggcatgacacctgctcatttc
tccatgtcaactccctatcttgatggcttgatgtcaccaactcatttgtccagtccaaat
ctgcgcccatcaccaattaataatgcagttttttcaccttatggaatggcctgtggttac
agcgcatatcgaagtgactacagtatatcttcacctgcttatgatccagtttcacctaag
tacactcccactgatcctggatatagccctgtgtcaccaagttatagccctctttcccca
acttacagcccggtgtctccgacatatagtcctatatcacctgcatatagccccttatct
cctgggtacagccctacatcaccaagctatagtcctatatcacctgcatatagcccctcc
tctcctgggtacagccctacatcaccaagctatagtcctacttccccttatcacagtcgg
ttatctgcagagtatagtcccacatcaccatactatagccccacatcaccatcttattct
ccatccagcccaacatttagtccaagcagtctggatttcagcctaacttctccacagttc
agtgcttcaatggaatactcgccaagtcgacctggttactcaccggcatcaaccagccaa
tacactccatag
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integrated database retrieval system
