Acromyrmex echinatior (Panamanian leafcutter ant): 105147251
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Entry
105147251 CDS
T03917
Name
(RefSeq) LOW QUALITY PROTEIN: DNA-directed RNA polymerase I subunit RPA1
KO
K02999
DNA-directed RNA polymerase I subunit RPA1 [EC:
2.7.7.6
]
Organism
aec
Acromyrmex echinatior (Panamanian leafcutter ant)
Pathway
aec03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
aec00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
105147251
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
aec03021
]
105147251
Enzymes [BR:
aec01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
105147251
Transcription machinery [BR:
aec03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
105147251
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_1
RNA_pol_Rpb1_4
Cytochrom_c3_2
Motif
Other DBs
NCBI-GeneID:
105147251
NCBI-ProteinID:
XP_011056438
LinkDB
All DBs
Position
Unknown
AA seq
1691 aa
AA seq
DB search
MTSKYHHKQRLTPKHRDSLRLIFSVFTANDVRNLSVTKIITSLSFNILGHPLKGGLYDPS
LGTTKNSSELCSTCGHNSSKCPGHFGHIELPVPVVNPLFHKALSMLLKLSCLSCFTLQIP
SYIKLLLSAKLKLLYQGQLSDLDGLDHEVTSILSNIEQEEEQTEYIRNVIDTYMQNFFNR
NRYNQIMPQNPENQANIKSVIMQWHAYIENILKQYVRTNKAGICMNCHDSLPKMSTLQNK
IMISNKEIVKNSKEMLSCEVAHKLEMIMIMPDQSKEYLRQLWHNERDFLKIIVPCLELVD
IEYPTDIFFFEVIPVLPPIVRPVNFLNGQMIEHPQTHIYKSIIQDCLVLRNVIQTIQDGG
IDHLPQEGRLVFEQIKGITAVEKLHNAWQALQSNVNHLMDRDMNKSSESINGQGLKQILE
KKEGIIRMHMMGKRVNFAARTVITPDPNLNIDEIGXLTPWNVIELRRLVLNGPDVHPGAV
MVENEDGSILAISSNDCTQREAIAKRLLTTSDRTNEFIGVKIVHRHLQNGDVLLINRQPT
LHKPSIMAHKARVLKGEKTLHLHYANCKAYNADFDGDELNAHFPQNELARSESYNIANVS
NQYLVPKDGTPLSGLIQDYMVSGVRLTTRGRFFSKAHYTQLVYTALPVMQKDIILLSPTI
IKPKMLWSGKQILSTVIINIIPSHKTRINLVSNTKIRAKEWQAEIPRRWKCGTEFKNSMT
MSEAEVIIRHGELLCGVLDKMHYGATPYGLIHCIYELYGAICANEMLSAFGRLFQMFLQC
DGFTLGVEDILITPEINEKRKEIISNCRKIGETVQKSVVKASNDTPMNEILTKMEESYWN
NTKFRAQVDHKYKSTLDVYTNDINNVCLLTGLFKKFPNNNLQLMVQSGAKGSTVNTMQIS
CLLGQSELEGKRPPLMISGKSLSSFPAYDPTPRAGGFIDGRFMTGIKPQECFFHCMAGRE
GLIDTAVKTSRSGYLQRCLVKHLEGLIVSYDATVRDYDGSLIQFYYGEDGLDVPGSRFLT
KNQIAFLVDNKESIMDAKLLECLKRNDKEIAKTIKKIKKWESKNGSSLQKRRINEFSKFS
MEISNQNDVKQKIIDSHSGRSKAALSLMRKWIRAEKELKESYHAQCTRCPDPIMSKYRQD
VEFGVLSERIEGLMDEYLSRPTKIKKSVLRDLLSIKVMKTICPPGEPVGLLAAQSIGEPS
TQMTLNTFHFAGRGEMNVTLGIPRLREILMIASKNIKTPSMEIPLQDNLENLEKQAKKLR
LRLTKCVLRDVLKDIIISRRMEGSPHRRLVHTLRIKYLPHKYYKEEFTVHPRDVIKCTEE
QFFKNIFKEIKKFATISKVLLKLHFEGEKRRINDEDAVIDEIDPDEVVPKNPGSRTRMDL
GEMHESSDEEEAAEDADATMTKSLLRHRENQEYEDPEEEEEEIEDIVLNDKEEEPDDNNN
ANRILEDKEDDDDDDTNEKSNHRRKNNNSKSTSGKDRVLDMYENAMDYDYDENKLSWCKF
TFWLPLKTIRLDLPTIIKNAANKTVLWETKCIKKAFTFQNSKGETILKTDGLNIVEMFKY
DKILDLNRLYSNDIYNISQTYGIEAANRVIVREIKDVFKMYGITVDVRHLSLIADYMTFD
GTFKPLSRKGMENSASPLQQISFESSLGFLKTATLQGKKDDILSPSSRLMLGQPCKSGTG
AFSILQSLYNM
NT seq
5076 nt
NT seq
+upstream
nt +downstream
nt
atgactagtaaataccatcataaacaacgtttaacaccaaaacatcgagattccctacgt
ttaatattctcagtttttactgcaaacgatgtaaggaatttgagtgtaacgaaaatcata
acatcattatcttttaacattcttggacatccattaaagggtggattatacgatccatct
ttaggcacaacgaaaaacagttcggagctatgcagcacatgtggacataatagttccaag
tgtccaggtcattttggtcatatagaattaccagtacctgtcgtcaatccattattccac
aaagcattgtcaatgttgcttaaattgtcatgtttaagctgcttcacattacaaatacca
tcatatatcaagttattgctgtccgcaaaattaaaactactgtaccaaggacaactcagc
gatcttgatggtttggatcatgaagtaacatctatattatcgaatattgaacaagaagaa
gaacaaacagagtatattcgtaatgtaattgacacttatatgcagaatttcttcaataga
aatagatacaaccaaatcatgcctcagaatcctgagaatcaagctaatataaagagtgtc
attatgcaatggcatgcatatattgaaaatatacttaaacaatatgtgagaaccaataaa
gctgggatatgcatgaattgtcacgatagtcttccaaaaatgtcaacgttgcaaaacaag
ataatgataagcaacaaggaaattgtgaagaattctaaagaaatgctctcgtgcgaagta
gcgcacaaattggaaatgattatgattatgccagatcaatccaaggaatacctacgacaa
ctatggcataacgaaagagattttctcaaaattattgtaccttgcttagaattggtagat
atcgaatatcctactgatatattctttttcgaggtaatacctgtattaccaccaatcgtg
cgaccagtaaattttcttaatggtcaaatgatcgaacatcctcaaactcatatctataag
agcattatacaggattgtttagtcttaagaaatgttatacaaactattcaagatggaggt
attgatcacctacctcaggaaggtcgacttgtctttgaacaaataaaaggaattacagca
gttgaaaagttgcacaatgcttggcaagcgttacaaagcaatgtgaatcacttaatggat
cgcgatatgaacaaatcgtctgagtccatcaatggtcaaggcttgaaacaaattcttgaa
aaaaaagaaggtattattagaatgcatatgatgggtaaaagagtgaattttgccgctcgt
acagttattactccagatcctaatttaaatatcgatgaaattggcnatttaacaccatgg
aatgttattgaattgagacgattagtcttaaacggtcccgatgttcatcctggcgcagtt
atggtggaaaatgaagatggatcgatactagctattagtagtaacgattgtacgcagagg
gaagctatcgcgaaacgtctcttaacaacgagcgacaggaccaacgagtttattggtgtg
aaaatagtacatcgacatcttcaaaatggcgatgtattgctaataaatagacaaccgaca
ttacataaaccgagtataatggctcacaaagcgcgtgttctcaagggagaaaaaacttta
catcttcattatgcgaattgtaaggcatacaacgcggacttcgatggagatgagcttaac
gctcatttcccacaaaatgaattggctagaagtgaaagttataacatagctaatgtatcc
aaccaatacctcgtgccaaaagatgggactccattgagtggcctcatacaggattacatg
gtgtctggagtacgattaacaactagaggtagatttttttcaaaggcacattacacgcaa
ttagtttatacagcattgccagtgatgcaaaaggacataattcttttatcgccaactatt
attaaaccgaaaatgttgtggtcgggtaaacaaatactttcaacagtcatcattaatatt
attccctcgcataaaacacgaatcaatttggtctctaacacgaaaattcgtgcgaaagaa
tggcaagcagagataccacgacgttggaaatgtggaacagaatttaaaaattcgatgacc
atgtcggaagcagaagttataattcgacacggagaattattgtgtggggtacttgataaa
atgcattacggtgcgactccttatggtcttattcattgtatttacgaattatacggggca
atatgcgcgaatgaaatgttaagcgcatttggtagactattccaaatgtttctacagtgc
gatggttttactcttggtgttgaggacattctaatcactcctgaaatcaatgaaaaacgt
aaagaaataatttccaattgtagaaaaattggggaaactgtacaaaaatctgtagtaaaa
gcatctaatgatacacctatgaacgaaattctaactaaaatggaagaatcttactggaat
aatacaaaatttcgcgcgcaagttgatcacaaatataagagcactttagacgtttatacc
aatgacattaacaatgtttgtttgctgacgggacttttcaaaaagttcccaaataataat
ttacagctcatggtgcaatctggtgcaaagggatctacggttaatactatgcaaatatca
tgtttgctcggtcaaagcgaattggaaggtaaaaggccaccgttgatgatcagcggaaaa
agtttatcaagtttcccagcctacgatccaacacctagagcaggtggttttatcgacggc
agatttatgaccggcatcaaaccccaagaatgttttttccattgcatggcgggacgcgaa
ggtcttatcgatactgccgtaaaaactagtaggtctggttatttacagagatgtttagtt
aaacatctagaaggtttgattgttagttacgatgcgacggttagagactatgacggtagc
ttaattcagttttattatggagaggacggtctcgatgtaccgggttcacgttttctaaca
aagaatcaaatcgcatttttagttgataataaagagtccattatggatgcaaagttatta
gaatgtctgaaaagaaatgacaaagagattgcgaagacgataaaaaagatcaaaaaatgg
gaaagcaagaatggttcctcgttgcaaaagaggagaattaatgagtttagtaaattctct
atggagatttccaatcagaatgatgtgaaacaaaaaatcattgatagtcatagtgggagg
agcaaagccgcattatcgcttatgagaaagtggataagggcagaaaaggaactgaaagag
tcatatcatgcacaatgtactagatgtcccgatccaataatgtcaaaatacaggcaagat
gttgaatttggagtattatctgaacggatagaaggcttaatggacgaatacctctctcgt
ccgacaaaaattaaaaagtctgttttaagagatttattgtccatcaaagttatgaaaaca
atttgtccgcctggtgaaccagttggtttattagcagcacaatctataggtgaaccatct
actcaaatgactttgaataccttccattttgcaggacgtggagagatgaacgtgacctta
ggtattccaagattacgtgaaatcttgatgatagcgtcgaaaaacataaaaactccaagt
atggaaataccactccaagataacttggaaaatcttgaaaaacaagcgaagaagctgaga
ttaagattaacaaaatgcgttctacgcgatgtattaaaagacataataataagcagacga
atggaaggaagcccacaccgaagattggtgcacactttaagaatcaaatatcttcctcat
aaatactataaagaagagtttaccgttcatccgcgggatgtgattaaatgcaccgaggaa
caatttttcaagaatatattcaaggaaattaaaaaatttgccactatttctaaagtttta
ttaaagttacatttcgaaggagaaaaaagacgaataaacgacgaggacgcagtaatagat
gaaattgatcctgacgaagttgtaccgaagaatcctggaagcagaacacggatggattta
ggagagatgcatgagtcatccgatgaggaggaagccgcggaagacgccgatgctacaatg
actaaatcattattgcgtcatcgagagaatcaagaatatgaagatcccgaagaagaagaa
gaagaaattgaagatattgtattaaatgataaggaagaagagccagacgataataataat
gcaaatagaattctcgaggataaggaggatgatgatgatgacgatactaatgagaaatcg
aatcatagaaggaagaataacaatagcaaatctaccagcgggaaggatcgtgtcttggat
atgtatgaaaatgctatggattatgattatgacgagaataaattatcatggtgcaaattt
accttttggttaccgcttaaaacaatcagattggatttgccaacaataattaagaatgct
gcgaataaaactgtcttatgggaaacaaaatgtattaagaaagcttttacatttcaaaac
agtaaaggcgaaacgattctcaaaacagatggtttaaatatagtggaaatgtttaagtat
gataaaatacttgatttaaacagattatattctaacgacatttataatatttctcaaaca
tatggaattgaagccgcaaatcgagttattgtaagagaaattaaagatgtcttcaagatg
tatggcatcaccgttgacgtaagacatctgtctttaatcgcagattatatgactttcgat
ggtacgttcaaaccactcagtcgaaaaggaatggaaaattctgcttcaccattacagcaa
ataagtttcgaaagttcgctaggctttttgaaaacggcgacattgcaaggaaaaaaggat
gatatattatcaccttcgagtagattgatgttaggacaaccgtgcaaatctggaactggg
gcattttctattttacaatcattgtacaacatgtaa
DBGET
integrated database retrieval system
