Arsenophonus endosymbiont of Aphis craccivora: E3U36_04440
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Entry
E3U36_04440 CDS
T07584
Symbol
rfaD
Name
(GenBank) ADP-glyceromanno-heptose 6-epimerase
KO
K03274
ADP-L-glycero-D-manno-heptose 6-epimerase [EC:
5.1.3.20
]
Organism
aed
Arsenophonus endosymbiont of Aphis craccivora
Pathway
aed00540
Lipopolysaccharide biosynthesis
aed01100
Metabolic pathways
aed01250
Biosynthesis of nucleotide sugars
Module
aed_M00064
ADP-L-glycero-D-manno-heptose biosynthesis
Brite
KEGG Orthology (KO) [BR:
aed00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
E3U36_04440 (rfaD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
aed01005
]
E3U36_04440 (rfaD)
Enzymes [BR:
aed01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.20 ADP-glyceromanno-heptose 6-epimerase
E3U36_04440 (rfaD)
Lipopolysaccharide biosynthesis proteins [BR:
aed01005
]
Core region
E3U36_04440 (rfaD)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Epimerase
GDP_Man_Dehyd
3Beta_HSD
RmlD_sub_bind
NAD_binding_4
Polysacc_synt_2
KR
Motif
Other DBs
NCBI-ProteinID:
QLK87584
UniProt:
A0A7D6I5P6
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Position
complement(849648..850586)
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AA seq
312 aa
AA seq
DB search
MIIVTGGAGFIGSNIVKALNDIGRSDILVVDNLKNGAKFVNLVDLDIADYIDKEDFIASI
MAGDNIGEVDAVFHEGACSSTTEWNGQYMMNNNYEYSKELLHYCIERDIAFLYASSAATY
GGRSDHFIEERQYEKPLNVYGYSKFLFDQYVRGLLPQITSQVCGFRYFNVYGPREWHKGS
MASVAFHLNSQINQGQRPKLFAGSEKFKRDFIHVSDVAVVNLWCWQNKISGIFNCGTGKA
DSFQAVADAVIAFHQEKKLAVEYIAFPDKLKGCYQAFTEADLTKLRDTGYDKPFKTVAEG
VADYMQWLNGND
NT seq
939 nt
NT seq
+upstream
nt +downstream
nt
atgatcatagtcacgggtggggctggttttattggcagcaatattgttaaagcactgaat
gatatagggcgtagcgacattctggtggtcgataatcttaaaaatggcgctaaatttgtt
aatttagtcgatttagatattgcagattatatcgacaaagaagattttattgccagtata
atggctggtgataatattggtgaagttgacgcagtttttcatgaaggcgcttgttcatct
accactgagtggaatggtcagtatatgatgaataataactatgaatattcgaaagagtta
cttcattactgtattgaacgagatattgcgtttttgtatgcttcttcggctgcaacttat
ggtgggcgcagtgatcattttattgaagagcggcaatatgaaaaaccattaaatgtatat
ggttattccaagtttttatttgatcaatatgttcgtgggcttttaccacaaattacttca
caagtttgtggcttccgttattttaatgtttatggtccgcgtgagtggcataaggggagc
atggccagtgtcgctttccatttaaatagccaaatcaatcaagggcaaaggccaaaactt
tttgccggtagtgaaaaattcaaacgtgattttattcatgtcagtgatgttgctgtggtt
aatttatggtgttggcaaaataaaatctccggcatatttaactgcggtaccggtaaggcg
gactcttttcaggcggtagctgatgcggtaatcgcttttcatcaggaaaaaaaactggca
gtggaatatattgcctttcctgataaattgaaaggttgttatcaggcatttaccgaagca
gatctcaccaaattacgtgatacgggttacgataaaccgttcaaaactgtggcggaaggg
gttgctgactatatgcaatggttaaatggcaatgattaa
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