KEGG   Actinidia eriantha (wild kiwifruit): 130757149
Entry
130757149         CDS       T09464                                 
Name
(RefSeq) DNA-directed RNA polymerases IV and V subunit 2-like
  KO
K16252  DNA-directed RNA polymerase IV and V subunit 2 [EC:2.7.7.6]
Organism
aew  Actinidia eriantha (wild kiwifruit)
Pathway
aew03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:aew00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    130757149
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:aew03021]
    130757149
Enzymes [BR:aew01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     130757149
Transcription machinery [BR:aew03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol IV and V specific subunits
     130757149
SSDB
Motif
Pfam: RNA_pol_Rpb2_6 RNA_pol_Rpb2_1 RNA_pol_Rpb2_7 RNA_pol_Rpb2_4 RNA_pol_Rpb2_3 RNA_pol_Rpb2_2 RNA_pol_Rpb2_5 DUF2002
Other DBs
NCBI-GeneID: 130757149
NCBI-ProteinID: XP_057467805
LinkDB
Position
20:complement(1111770..1127630)
AA seq 1225 aa
MWPPDSKEDPEPSGKGGNNLNGVKDMDLDDILGQPGTSSKGGKLANGDLHMDLDDDDDLM
DPTPIRDLGAGFLNNFCRKAAISFFEQHGLISHQINSYNDFIKNGVQNVFDSIGEVTVEP
GYDPSKKGENEWKYASVKFGKVTLERPRFWTGDKFSADSGKEFLNLLPRHARLQNMTYSS
RMKVQIHVQVYTQNLVRSDKFKTGKEQYLDKEVISEDDRDVLIGRIPVMVKSDLCWMNGV
EKGDCDFDHGGYFLIKGAEKTFIAQEQICLRRLWVSSSPTWTVAYREVSKRKRVYIKLET
PKSEQIRGGEKVLTVYFSATEFPIWILFFALGVSSDKEVVNLIDCDCNDSSIVNVLIASI
HYADKHCDGFRRGKNALSHVVKEIEKCRFPPGESVEDFFGNYLFSNLSGFKRKARFLGYM
VNCLLLAYTGRRKVDNRDDFRNKRLELAGELLERELRVHVKHAERRMVKAMQRDLYGDRS
LHPIEHYLDASIITNGLSRAFSTGAWTHPYKRMERTSGVVATLRRTNPLQTTADMRKTRQ
QVQYTGKVGDARYPHPSHWGKICFLSTPDGENCGLVKNLAITGLVSTNIQEPFLDELLDC
GMDNLVDDTSTLLSGKDKVFLDGDWVGVCEDSVSFVAELRRKRRRKEVPPQVEIKRDEKH
KEVRIFSDAGRILRPLLVVENLRKIKALKGGDYSFRSLLDNGVIELIGAEEEEDCRTAWG
IKYLLMENDVKPPVKYTHCELDMSFLLGLSCAIIPFANHDHARRVLYQSEKHSQQAIGFS
TTNPNIRVDTNTHQLYYPQRPLFRTMLSDCLGKPGYPLGHSGIVPRPEIFNGQCAIVAVN
VHLGYNQEDSLVMNRASLERGMFRSEHIRSYKADVDNNEAIGKKPKFEDAVNFGKVQSKI
GRVDSLDDDGFPFIGANLQNGDIVIGKCAESGADHSIKLKHTERGMVQKVVLSANDEGKN
FAVVSMRQVRTPCLGDKFSSMHGQKGVLGFLESQENFPFTIQGIVPDIVINPHAFPSRQT
PGQLLEAALGKGIACGGSQRYATPFSTISVDAITDQLHRAGFSRWGSERVYNGRTGEMIR
SLIFMGPTFYQRLTHMAEDKVKFRNTGPVHPLTRQPVADRKRFGGIKFGEMERDCLIAHG
AAANLHERLFTLSDSSQMHICRKCQNIANVIQRAVPGGRKIRGPYCRFCESVEDIVLVNV
PYGAKLLAQELFSMGISMKFETELG
NT seq 3678 nt   +upstreamnt  +downstreamnt
atgtggccaccagattccaaggaagaccctgaaccaagtggtaagggtgggaataattta
aatggagtgaaagacatggacttagatgacatactgggacagccgggaacgagtagtaag
ggtgggaagttagcaaatggagatcttcatatggatctggatgatgatgatgacttgatg
gacccaacgccaatacgtgatttgggagcaggttttctgaacaacttttgtagaaaggca
gcgatatcattttttgaacagcatggactgatcagtcaccaaattaactcttacaatgat
ttcatcaaaaatggagtccagaatgtgtttgactccattggtgaggtcacagtggagcct
ggatatgatccatccaagaagggggagaatgaatggaaatatgcttcagtgaagtttggg
aaggtaacccttgagcggccacggttttggacaggtgataaattttcagctgacagtggt
aaagagttcctcaatttgttgcccagacatgctcgccttcagaatatgacgtattcgtcc
cgaatgaaagttcagattcatgttcaggtgtacacacagaatcttgttagaagtgataaa
tttaaaactggcaaagaacagtatcttgataaggaggttataagtgaagatgacagggat
gtccttattggacggatacctgtaatggtcaaatctgatttgtgctggatgaatggggtt
gagaaaggtgattgtgactttgaccatggaggctatttcttgatcaagggcgccgagaag
acattcattgcacaggagcaaatctgcctgagaagactttgggtctctagtagtccaact
tggacggtagcataccgtgaagtttcaaaaaggaaaagagtgtatataaaactggaaact
cctaaaagtgaacagattagaggaggagaaaaagtcctaactgtgtatttctctgcaaca
gagtttccaatctggattttgttttttgcccttggtgtatcatccgataaggaagtggtt
aatttgattgactgtgattgtaatgattccagcatcgtcaatgtactaattgcatcaatt
cattatgctgacaagcattgtgatggttttcgtagagggaaaaatgctcttagtcatgtt
gtgaaagaaatagaaaaatgcagatttccacctggagaatctgttgaagacttctttggt
aattatttgttctccaatctgagtggcttcaagcgaaaggctcgttttcttggctatatg
gtgaattgtctcttgctggcctatactggccgcagaaaagttgataacagggatgatttt
agaaataagaggttggaactggctggtgagctgcttgagcgagagctgagagtgcacgtt
aaacatgctgagaggcgtatggtaaaggctatgcaaagggatctatacggagatcgtagt
ctgcatccgattgaacactatctggatgcatcaattatcaccaatggtctttctagggca
ttctcaactggagcatggacacatccttacaagaggatggaaaggacatctggtgtagtg
gcgacacttaggaggacaaatccattgcagactacagctgatatgaggaaaacacgtcag
caggttcaatacactgggaaggttggggatgcaagatatccccatccctcccactgggga
aagatctgctttctgtctacaccagatggtgaaaattgtgggcttgtaaaaaatttggcc
atcacaggactagtcagtacaaacattcaggaacctttccttgacgaattactggattgc
gggatggataacctggtggatgatacttcaactttgctttctggaaaggataaagttttc
ctggatggggactgggtgggagtatgtgaagattctgtttcttttgttgcagagctaaga
cgtaagcggcgaaggaaggaagtgccaccccaggttgagatcaaaagagatgagaagcac
aaggaagtacgcatattttctgatgccggaaggattttgcgccctcttctagttgttgag
aacttgaggaagattaaagcactaaaagggggagattacagctttcgatctcttctggat
aatggagtaattgaacttattggagctgaagaagaagaagactgcagaactgcttggggg
attaaatatctcttgatggaaaatgacgtgaagccacctgttaaatatacacactgcgaa
cttgacatgtcatttttattaggtttaagctgtgcaattatcccttttgcaaatcatgac
catgcaaggagggtcctctatcagtcggagaagcactctcaacaggctatcggtttttcc
acaacaaatccaaatatcagagtagataccaatacccatcagctatactacccccagagg
ccacttttcaggacaatgctttctgattgtctcggtaagccaggatatcctctaggtcat
agtggaatagtgccaaggcctgaaatcttcaatggccagtgtgctattgttgcagttaat
gttcacttggggtacaaccaagaggattccttggtaatgaatcgggcatcattagaacgt
ggcatgtttcgatcagagcacatcagaagttacaaagctgatgttgataataacgaagca
atagggaagaaacccaagtttgaggacgcagtaaactttgggaaggtacagagtaaaatt
ggacgtgttgacagccttgatgatgatggttttccattcatcggggcaaacctgcagaat
ggtgatattgtcattggcaagtgtgcggaatcaggggctgatcacagtataaaactgaag
cacacggagaggggtatggttcagaaagtcgtcttatctgcgaatgatgaggggaaaaac
tttgctgtagtatctatgagacaggttcgaacaccgtgtcttggagacaagttctctagc
atgcatgggcagaagggtgttctgggttttctggaatctcaagagaattttcccttcacg
atacaagggattgttccagatattgtcataaacccccatgcatttccttcacggcagact
cctggtcaactactagaggctgccttgggaaaagggattgcctgcggtgggtcgcaaaga
tacgccacccccttttccactatttctgttgatgccataaccgatcagcttcatagggct
ggattttcaagatggggaagtgagagggtgtataatggccgaactggtgagatgattcgc
tctctcatatttatgggcccgaccttctaccagcgtctgacccatatggcggaagacaaa
gtgaagttccgcaacaccgggcctgtgcatccacttaccaggcagccagtggcggacagg
aagcgttttggagggatcaaattcggcgagatggagcgcgactgccttatagcccatggt
gctgcagcgaatctacacgagcggctcttcacgctcagtgactcctcccaaatgcacatc
tgccggaaatgccaaaacattgcaaatgttatccaacgtgctgtgccaggtggtcgtaag
attaggggtccctattgtcggttttgtgagtccgtagaagacattgttctagtaaatgtc
ccttacggggcaaaattacttgcccaagaactcttcagcatgggtatctccatgaagttc
gagacagagcttggttga

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