Actinidia eriantha (wild kiwifruit): 130783558
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Entry
130783558 CDS
T09464
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB2-like
KO
K03010
DNA-directed RNA polymerase II subunit RPB2 [EC:
2.7.7.6
]
Organism
aew
Actinidia eriantha (wild kiwifruit)
Pathway
aew03020
RNA polymerase
aew03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
aew00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
130783558
09124 Replication and repair
03420 Nucleotide excision repair
130783558
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
aew03021
]
130783558
03400 DNA repair and recombination proteins [BR:
aew03400
]
130783558
Enzymes [BR:
aew01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
130783558
Transcription machinery [BR:
aew03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
130783558
DNA repair and recombination proteins [BR:
aew03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
130783558
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_2
RNA_pol_Rpb2_7
RNA_pol_Rpb2_3
RNA_pol_Rpb2_4
RNA_pol_Rpb2_5
Motif
Other DBs
NCBI-GeneID:
130783558
NCBI-ProteinID:
XP_057499243
LinkDB
All DBs
Position
8:24592923..24601040
Genome browser
AA seq
1194 aa
AA seq
DB search
MDLEEEYDPSQDDEEEEGEDITQEDAWAVISAYFEDKGLVRQQLDSFDEFIQNTMQEIVD
ESSDIEIRPESQHNPGHQSDFAETVYKISFGQIYLSKPMMTESDGETATLFPKAARLRNL
TYSAPLYVDVTKRVIKKGHDGEEVTETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLTEL
GECPYDQGGYFIINGSEKVLIAQEKMSTNHVYVFKKRQPNKYAYVAEVRSMAESQNRPPS
TMFVRMLSRTSAKGGSSGQYIRATLPYIRTEIPIIIVFRALGFVADKDILEHICYDFADT
QMMELLRPSLEEAFVIQNQQVALDYIGKRGATVGVTKEKRIKYAKEILQKEMLPHVGVGE
YCETKKAYYFGYIIHRLLLCALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDV
RGYVQKCVDNGKDVNLQFAIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYA
STLSHLRRLNSPIGREGKLAKPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGS
AAYPILEFLEEWGTENFEEISPAVIPQATKIFVNGCWVGVHRGPDMLVRTLRRLRRRVDV
NTEVGVVRDIRLKELRIYTDYGRCSRPLFIVEKQKLLIKKKDVQTLQQRETPEDGGWHDL
VAKGFIEYIDTEEEETTMISMTINDLVSARLNPEEAYSETYTHCEIHPSLILGVCASIIP
FPDHNQSPRNTYQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQL
PAGINAIVAIACYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLIKEDFGRP
DRANTMGMRHGSYDKLDDDGLAPPGTRVSGEDVIIGKTTPISQDDVAQGGPAARYTRRDH
STSLRHSETGMVDQVLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQE
DMPWTMEGITPDIIVNPHAIPSRMTIGQLIECIMGKVAAHVGKEGDATPFTDVTVDNISK
ALHKCGYQMRGFETMYNGHTGRRLTAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQ
PAEGRSRDGGLRFGEMERDCMIAHGAAHFLKERLFDQSDAYRIHVCEKCGLIAIANLKKN
SFECRGCKNKTDIVQVHIPYACKLLFQELMSMAIAPRMLTKDIKPGKDQKKKGT
NT seq
3585 nt
NT seq
+upstream
nt +downstream
nt
atggacttggaggaagagtacgacccgtcgcaggacgacgaagaagaagaaggggaggac
atcactcaggaagacgcctgggccgtgatcagcgcctacttcgaagataagggccttgtt
cgtcaacaactcgactcgttcgacgagttcatacagaacactatgcaggagatcgtcgac
gagtcctccgacatcgagattcggcccgagtcgcagcacaaccctggtcaccagtccgat
ttcgccgagactgtctataagatcagctttggtcaaatatacctaagtaagccgatgatg
acagagtcagatggagaaactgcgactttgttccccaaggctgcgaggttgaggaatttg
acatactcagctcccttgtatgtggatgtgacaaagagagttataaagaaaggacatgat
ggtgaagaagtcactgaaactcaggatttcactaaagtcttcattgggaaggttcctata
atgttacggtcaagttactgcacgttatatcagaattcagagaaggatttgacagagctt
ggagagtgcccttatgatcaaggtggttacttcatcatcaatggtagtgaaaaagtttta
attgctcaagagaagatgagcacgaatcatgtctatgtgtttaagaagaggcagccaaac
aagtatgcctatgtggctgaagtccgatcaatggcagagtcccaaaaccggccacccagt
accatgtttgtgcgaatgctctcccgaactagtgccaaagggggctcctctggccaatat
attcgtgctacccttccatacattcgtacggagattcctattattattgtgtttcgtgca
ttagggttcgttgcggataaagatatattagaacacatatgctatgatttcgctgatact
cagatgatggagttgctgagaccctccttggaagaagcatttgtcatacaaaatcagcag
gttgccctagattacattgggaaacgaggggccacagttggtgtcacaaaggaaaagagg
attaagtatgccaaagaaatccttcaaaaggaaatgcttccgcatgttggggttggagaa
tattgcgagacaaagaaagcatattattttggatacatcattcaccggcttctgctttgt
gcacttgggcggagggccgaggatgatagggatcattatggcaataaaagactggacctt
gctggtcctttgcttggtggcctatttcgaatgctattcagaaagctgacaagagatgtc
agaggttatgttcaaaagtgtgttgataatgggaaggatgtcaatcttcaatttgcgatc
aaagcaaaaacgatcacaagtggccttaaatattcacttgctactgggaactggggtcag
gcaaatgcagctggcactagagctggagtttcacaggtgttaaatcgcttaacatatgcc
tccactttgtcacatttgcgaagattaaattctcccatagggcgtgaagggaaattggca
aaaccacgacagttgcacaattcacagtggggaatgatgtgccctgcagaaacacctgaa
gggcaagcatgtggactggtaaagaatcttgcattgatggtgtatataactgttggatca
gcagcatatcctattctggagtttttggaagaatggggtactgagaactttgaggagata
tcccctgcggtgattccccaagctacgaaaatctttgtcaatggttgctgggttggtgta
catcgtggtcctgacatgctggtgaggacattaagacgcctgcggagacgggttgacgtc
aacactgaagttggggttgttagagatatccgcttgaaagaactccgaatatatactgat
tatggccgttgcagtaggccattattcattgttgagaaacaaaaacttcttataaagaag
aaggatgttcaaacattgcaacagagggagacaccagaagatggtggctggcatgatctt
gtagcaaagggattcattgagtatattgatacagaagaagaagaaactactatgatttcc
atgaccataaatgatctcgtaagtgcaagactcaatccagaggaagcttattctgaaact
tacacccattgtgaaattcatccgtcactgatactaggtgtttgtgcttcaattatacca
tttcctgaccataaccaatccccacgtaatacatatcagtcagccatgggtaagcaagca
atgggaatttatgtcaccaactaccaatttcgaatggatacattggcatatgtgctctac
tatcctcaaaaacctcttgttactactcgggccatggagcacctgcacttcaggcagctt
ccggctggcattaatgccattgttgccattgcctgctattctggatataaccaggaagat
tccgtcattatgaaccagtcatcaatagatcgtgggttctttcgatcacttttcttccgt
tcatatagggatgaggagaagaaaatggggacactcattaaggaagattttggtcgccca
gatagagctaataccatggggatgcgacatggctcttatgataaattggatgacgatggt
cttgcacctcctggaacaagagtttcaggggaagatgtaatcatcggcaagacgactcca
atttctcaggatgatgttgctcagggtggtccagcagcacgttacacgcggcgcgatcat
agtacaagcttacgacacagtgaaactgggatggtagatcaggttttattaactactaat
gctgacgggttgagatttgtaaaagtaagggtgagatcagttaggattcctcagattgga
gacaagtttagcagtcggcacggtcaaaagggaacagtcggcatgacatacactcaagaa
gacatgccatggaccatggaggggatcacaccggatattatcgtgaatccccatgctatt
ccttctcgaatgacaattgggcagcttattgaatgcatcatgggtaaggttgcagctcac
gtgggaaaggaaggggatgctactccctttacagatgttacagtggacaatatcagtaaa
gctcttcataaatgcgggtaccaaatgcgtggatttgagaccatgtacaatggtcacacg
gggcggcgactaacagctatgatattcctgggtcccacgtactaccagcggctgaagcac
atggttgatgataagatacattcccgtggccgaggccctgtacagatcctcactagacag
cctgctgaaggacggtcacgtgacggtggtctccgatttggtgagatggaaagggattgc
atgattgctcacggtgctgctcactttctcaaagaaaggttgttcgaccaaagtgatgca
tatagaattcacgtctgtgagaaatgtgggttgatagctattgcaaacctcaagaagaat
tctttcgagtgcagaggttgcaagaacaaaaccgatattgttcaggttcacattccatat
gcctgtaagctgctcttccaagagctaatgtctatggctatagctccgaggatgctcaca
aaagatattaaaccaggcaaagaccaaaagaagaaaggaacctaa
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integrated database retrieval system
