Alicyclobacillus fastidiosus: NZD89_19245
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Entry
NZD89_19245 CDS
T08690
Symbol
thiI
Name
(GenBank) tRNA 4-thiouridine(8) synthase ThiI
KO
K03151
tRNA uracil 4-sulfurtransferase [EC:
2.8.1.4
]
Organism
afas
Alicyclobacillus fastidiosus
Pathway
afas00730
Thiamine metabolism
afas01100
Metabolic pathways
afas01240
Biosynthesis of cofactors
afas04122
Sulfur relay system
Brite
KEGG Orthology (KO) [BR:
afas00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
NZD89_19245 (thiI)
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04122 Sulfur relay system
NZD89_19245 (thiI)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
afas03016
]
NZD89_19245 (thiI)
Enzymes [BR:
afas01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.1 Sulfurtransferases
2.8.1.4 tRNA uracil 4-sulfurtransferase
NZD89_19245 (thiI)
Transfer RNA biogenesis [BR:
afas03016
]
Prokaryotic type
tRNA modification factors
Other tRNA modification factors
NZD89_19245 (thiI)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ThiI
THUMP
QueC
Diphthami_syn_2
tRNA_Me_trans
Motif
Other DBs
NCBI-ProteinID:
WAH40453
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Position
complement(3893348..3894541)
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AA seq
397 aa
AA seq
DB search
MFDHILVRYGEINTKGQNRSQLEQMLMRNVQQAVRHWDSIRVRRISNRILVKLNGAPVDA
VLEALVKVFGISSLSPVMVAPLDVDAIVAVANQLLDRMAVAPRTFKVEVRRGNKRFPMDS
PTLTRHVGAALLASHPSLTVDVHQPEATVQIDVRDEGAFLYAEKIPGAAGLPVGMSGRVC
ALLSGGIDSPVAVWKAMKRGLKVDLVHFHSFPFTSERAQRKVEELTSTLASWSTDLNLHL
VSLTQTQAAIQKSCPEQLRTIILRRMMFRICEAMARTKGWLALVTGDSLGQVASQTLEGI
FAVDSVTSLSVLRPVGMEDKQDIIDAARHIGTFETSIQPYDDCCSLFAPKRPKTHPSLAE
VVRGEDKLDVEQLIETALQSVETKKVAARTESPMQLT
NT seq
1194 nt
NT seq
+upstream
nt +downstream
nt
atgtttgatcatattttagttcgctacggtgagataaacaccaaggggcagaacaggtca
cagcttgagcagatgctcatgcgcaacgtgcaacaggcggtgaggcactgggactccatc
cgcgtgcggcgcatcagcaaccgcatcctcgtaaagttgaacggggcacctgtggacgcc
gtcttagaggccctcgtgaaggtgtttggcatcagttctttgagccctgtgatggtggca
ccacttgacgtcgacgccatcgtcgctgtggcaaatcaactattggataggatggcggtg
gcgccacgcacgttcaaagtggaagtccgacgcggaaacaagcggttcccgatggacagt
ccgacattgacgcggcacgtcggggcggcgctgctcgcttcacacccctcgctgacagtg
gacgtacaccagccagaggcgaccgttcaaatcgacgttcgagatgaaggggcgttcttg
tacgcagagaaaattcctggtgcggctgggttgccagtggggatgagcggtcgtgtgtgc
gcgctgttgtccggtggcatagactcgcctgtagcggtgtggaaggcgatgaagcgggga
ctcaaagtcgatctcgtccactttcacagctttccgtttaccagcgaacgcgcccagcgc
aaggtcgaagaattgacgagcacgctggcgtcgtggtcgactgacctcaacctacacctg
gtatcgctgacacagacgcaggcggcgattcaaaagtcctgccccgagcagctgagaacc
atcatcctgcggcgcatgatgtttcgcatctgcgaagcgatggcacgtacgaagggatgg
ctcgcgctcgtaacaggcgacagtttgggccaggtggcaagccagacgctggaagggatt
tttgccgtggattcggtcacctctctaagcgtgttgcgccctgtggggatggaggacaag
caggacatcatcgacgcggctcggcacatcgggacgttcgagacatcgattcagccgtac
gacgattgttgttcgctatttgcaccgaagcgtccaaagacgcacccgtcgttggcggaa
gtggttcggggtgaggacaaactcgacgtcgaacagttaattgagacggcgcttcaatct
gtcgagacaaagaaagtcgcggcgcgcaccgaatctccgatgcaactgacatga
DBGET
integrated database retrieval system
