Anoplopoma fimbria (sablefish): 129095225
Help
Entry
129095225 CDS
T09102
Symbol
glb1
Name
(RefSeq) beta-galactosidase isoform X1
KO
K12309
beta-galactosidase [EC:
3.2.1.23
]
Organism
afb
Anoplopoma fimbria (sablefish)
Pathway
afb00052
Galactose metabolism
afb00511
Other glycan degradation
afb00531
Glycosaminoglycan degradation
afb00600
Sphingolipid metabolism
afb00604
Glycosphingolipid biosynthesis - ganglio series
afb01100
Metabolic pathways
afb04142
Lysosome
Module
afb_M00079
Keratan sulfate degradation
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00052 Galactose metabolism
129095225 (glb1)
09103 Lipid metabolism
00600 Sphingolipid metabolism
129095225 (glb1)
09107 Glycan biosynthesis and metabolism
00531 Glycosaminoglycan degradation
129095225 (glb1)
00604 Glycosphingolipid biosynthesis - ganglio series
129095225 (glb1)
00511 Other glycan degradation
129095225 (glb1)
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
129095225 (glb1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
afb04147
]
129095225 (glb1)
Enzymes [BR:
afb01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.23 beta-galactosidase
129095225 (glb1)
Exosome [BR:
afb04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
129095225 (glb1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_35
BetaGal_ABD_1
BetaGal_gal-bd
BetaGal_ABD2
Glyco_hydro_42
Motif
Other DBs
NCBI-GeneID:
129095225
NCBI-ProteinID:
XP_054459561
LinkDB
All DBs
Position
9:complement(10985753..11004934)
Genome browser
AA seq
649 aa
AA seq
DB search
MSLLRFGSMLLLLLLFGHSLGAPRSFSVDYQKDCFRKDGEEFRYISGSIHYNRIPRVYWK
DRLLKMYMSGLNAIQTYIPWNYHEEFPGSYDFSGDRDVEYFLKLAQDIGLLVILRPGPYI
CGEWDMGGLPAWLLNNKNIVLRSSDPDYISAVDKWMGKLLPMIKPFLYQNGGPIITVQVE
NEYGSYFACDYNYMRHLTKLFRSHLGEEVVLFTTDGAGLQYLKCGSIQGLYATVDFGPGA
NVTAAFDAQRHAEPRGPLVNSEFYTGWLDHWGSRHSVVSTVIVAKTLNEMLTLGANVNLY
MFIGGTNFGYWNGANEPYGAQPTSYDYDAPLTEAGDLTEKYFAIREVIKLYHKIPEGPIP
PTTPKYAYGTVGMKKLQTLSAALETLSFSGPVKSMYPQTFIELNQVFGYVLYRTTLPVNC
NTPTPLSSPLNGVHDRAYVSVDGVAMGILERNKAITVNVTGKAGSQVDLLVENMGRINYG
NHIKDFKGLVSNLTLGKDTLTGWTMYSLSIDEAVSQGLLGEKKTTDPPKPPALSLPAFYE
GSFIIPDGIPALPQDTYVKLPKWRKGQIWINGFNVGRYWPTRGPQVTLFVPANILSTAAP
NNVTVLELEEAPCSSGPCSVEFTATPILNATVQSDYKLQRRLFVKDDLL
NT seq
1950 nt
NT seq
+upstream
nt +downstream
nt
atgtctctgctcagattcggaagcatgctgttgttgttgttgctgtttggacattcactc
ggtgcacctcgttcattcagcgtggattaccagaaggactgctttcggaaagatggggaa
gagtttcgatacatatcaggaagcatccattacaaccggatcccccgagtctactggaag
gaccgactgctcaagatgtacatgtcgggactgaatgccatccagacgtacattccctgg
aactaccatgaggagtttccaggcagttacgattttagtggtgacagggatgtggaatat
ttccttaagctggcccaagacataggtttactggtcatccttcggcctggaccctacata
tgtggagagtgggacatgggtgggctgcctgcctggcttctcaacaacaaaaacattgtg
ctgcgctcctcagatccagattacatctcagcagtagataaatggatggggaagttactg
ccaatgataaagccttttctctaccagaacggcggtcctatcatcactgtacaggttgag
aatgaatacggcagttatttcgcctgtgactacaactacatgcgccacctgacaaagctg
ttccggtctcaccttggcgaggaggtggtgctctttaccacagatggagctggactccag
tacctcaagtgtggctcaatacaaggtctctacgctactgttgacttcgggccaggtgca
aatgtaacggctgcctttgatgcacagcgacacgctgaacctcgtggacctttggtgaac
tctgaattttacactggctggctggaccactgggggtcacgtcactctgtcgtgtcaact
gtcatagtggccaagaccctgaacgagatgctcaccctgggagcaaacgtcaacctgtac
atgttcataggaggaacaaactttggatactggaacggtgccaatgagccatacggcgcg
cagcccacgagctacgactacgacgccccgctaacggaagcaggagacctcacagagaag
tactttgccattcgagaggtgatcaaactgtaccataagataccagagggaccaatacca
cccacaactccaaagtacgcatatgggactgttgggatgaaaaagctccagacgctatca
gccgccttagaaacactgtctttctccggccctgtcaaaagcatgtatcctcagactttc
attgagctgaaccaggtctttggttatgtgctctacaggaccactctgcctgttaactgc
aacacaccaactccactgtcatctccactgaacggcgtccacgatagagcgtatgtgtcc
gtggacggggtggctatggggattcttgaaaggaacaaagccataactgtcaacgtgact
gggaaagctggcagtcaggtggacttactggtggagaatatgggccgaatcaactacgga
aaccacattaaggactttaagggcctggtgtccaacctgactctggggaaggatacgctc
actggctggaccatgtacagcctcagcatcgatgaagcggtcagtcagggtcttctcggt
gaaaaaaaaacaacagacccacctaagcctcctgctctctccctgccagccttctacgag
ggaagcttcatcattcctgacggcatcccagccctcccccaggacacctacgtcaagctg
cccaaatggaggaaggggcaaatttggattaacggcttcaacgtaggacgttactggcca
acccgaggccctcaggtgacactttttgtgcctgccaacatcctcagcacagctgcaccc
aacaatgtgactgtcctggagctggaagaggctccctgcagctcaggaccatgcagtgtg
gagtttactgccacccccatcctgaatgcaacagtccagtctgactacaaactgcaaagg
aggctcttcgttaaagatgatttgttgtga
DBGET
integrated database retrieval system
