Anoplopoma fimbria (sablefish): 129098757
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Entry
129098757 CDS
T09102
Symbol
grin2ca
Name
(RefSeq) glutamate receptor, ionotropic, N-methyl D-aspartate 2Ca
KO
K05211
glutamate receptor ionotropic, NMDA 2C
Organism
afb
Anoplopoma fimbria (sablefish)
Pathway
afb04020
Calcium signaling pathway
afb04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
129098757 (grin2ca)
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
129098757 (grin2ca)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
afb04040
]
129098757 (grin2ca)
Ion channels [BR:
afb04040
]
Ligand-gated channels
Glutamate (ionotropic)
129098757 (grin2ca)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Lig_chan
Lig_chan-Glu_bd
SBP_bac_3
NMDAR2_C
ANF_receptor
Motif
Other DBs
NCBI-GeneID:
129098757
NCBI-ProteinID:
XP_054463830
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All DBs
Position
11:8182448..8231425
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AA seq
1413 aa
AA seq
DB search
MGVRLGCLSDSPWWPPPLLLLLLLICAVPSCSGRPFGVPTPSVNVAVVFSGSAYQTEIKG
RLSRENFMDLPLEVNPITVLVNNTNPRALLTRICDTLSTNRVHGVVFEDNVGSEAVAQIL
DFISTQTAVPIVGISGGSAVVLPYKGEGSNFLQLGSSIEQQINGMFKVMEEYNWDSFVVI
TSLYPGYETYVDYVKSFTDTSYFIWDLQDVLTFDMSADGMNDVRARRLLQQIDAQVLLVY
CSHEEAQYLFSMAAESRLVGPGYIWIIPSLAVGNPDIPPPESFPVGLISIITDRWRMSLR
KRVRDGVAIVVKGVQSFRKQRGFVPEGQSDCHNPVKPAATNDSLFRHMLNVTWEHNDFSF
NSNGYLVNPAMIIITLDRERQWDKVGTFEMGIMQMRYPVWPRYGSYLEPVSDYRHLTVAT
LEERPFVIVEAVDPATGTCVSNTVPCRRQSNKTETIVGHTEPYTKLCCKGFCIDILKKLS
RTIKFSYDLYLVTNGKHGKLVRGIWNGMIGEVFYKRADMAIGSLTINEERSEIIDFSVPF
VETGISVMVARSNGTVSPSAFLEPYSPAVWVMMFVMCLTVVAITVFVFEYCSPVGYNRSL
VSAKEPGGPTFTIGKSVWLLWGIVFNNSVPIENPKGTTSKIMVLVWAFFAVIFLASYTAN
LAAFMIQEQYIDTVSGLSDKKFQKPQEQYPPFRFGTVPNGSTERNIRSNYPEMHSHMVKY
NQKGVEDALNSLKTGKLDAFIYDAAVLNYMAGKDEGCKLVTIGSGKVFATTGYGIALQKD
SRWKRHIDLALLQFLADGDTQKLQTVWLTGICRNEKKEVMSSKLDIDNMAGVFYMLLVAM
GLSLLVFAWEHLLYWKLRHSVRKAERLNFLLAISRGIYSCFNGVEHTDHSDSMPSPDVTT
NYTQANMLKMLKTAKDMVSSARVENSLDNATKTIENWSRRGVDNVRVGLPPRVTTTDMTH
GRLPYISSISDNHSPYPQRALTPTFPIHYGDATTQPLLEKPRVVTRPTLLRYTLPTRNSQ
HVLERTLPISSLSSPHIAMRDPVPAATSNPHHSSRLYVENPPRHPMSPFVPYREFQVPDI
YVEHKGPLRRKFSYPPDCIRRRRSHSYVYDAADPRVRGDYDEPRSCLAELRANHLLNNHA
PVAAAMSCTPGHYSGASASCNSCMKSYLEPEMDDVPLLGKDKLNRRASFLKATWGNDRIH
QVDETKPSTSKSSGRMDMPDLFPRVVVANPKPNKLYGSLGHNLSCYPLAAEPAYLDPAHM
GSYPYKQKLKYSESTRLPSYREAILQNAAALRRSSSTVVHRHYSTYLNSYTDLPVYVGPL
AQRPSQFYDSSKDVCHLFPCTSHCPDNAGMLPRMGDRQVVYHNNMFGNYDGTGKREDPGS
GNRERRQVLVARRSNSPYVPKPWGRVSSLESEV
NT seq
4242 nt
NT seq
+upstream
nt +downstream
nt
atgggcgttcgtctaggctgcttgagcgactccccctggtggccgccgccgctgctgctg
ctgctgttgctgatctgcgccgtcccctcttgctcaggccggccctttggggtccccacg
ccctccgtgaacgtggcggtggtgttcagcggctcggcctaccagacggagatcaagggg
cggttgagccgggagaacttcatggacctgcctctggaggtgaaccccatcaccgtgctg
gtcaacaacaccaacccacgggcgctgctcacccgcatctgcgacaccctctccaccaac
cgcgtccatggcgtggtgttcgaggacaacgtcggctcggaggccgtggcgcagatcttg
gacttcatctccactcagacggccgtgcccatcgtgggcatcagtgggggatccgcggta
gtcctgccatacaagggtgagggctccaacttcctccagctgggctcctccatcgagcag
cagatcaacggcatgttcaaggtgatggaggagtacaactgggacagcttcgtggtcata
accagcctgtaccccggatacgagacctacgtggattacgttaagtccttcaccgacacc
agctacttcatatgggatctgcaggacgtgctgacctttgacatgtccgccgatggcatg
aacgacgtccgggcgcggaggctgctgcagcagatcgacgcccaggtgctgttggtctac
tgctcccacgaggaggctcagtacctgttcagcatggcggccgagtccagactggtgggg
ccgggctacatctggattatccccagcctggcggtggggaacccggacatccccccacct
gagagcttccccgtggggctcatcagcatcatcacggaccgatggaggatgagcctgagg
aagcgggtgcgggacggcgtggccatcgtggtgaaaggcgtgcagagcttcaggaaacag
aggggctttgttcccgagggccagagtgactgtcacaaccccgtcaagccagctgctact
aacgactctctgttcaggcacatgttgaatgtaacctgggaacacaacgacttctccttc
aacagcaacggctacctggtgaatccagctatgatcattatcactctggaccgagagagg
cagtgggacaaggtggggacctttgagatggggatcatgcaaatgagatacccggtgtgg
ccgcggtacggctcctacctggagccggtgtcggactacagacatctgacggtcgccacg
ttggaggagaggccctttgtcattgtggaggcagtggacccggcgaccggtacatgtgtc
agcaacaccgtaccctgccgacgacagtccaacaagacggagaccattgtggggcacacc
gagccgtacaccaaactgtgctgtaaaggcttctgcatagacatcctgaagaagttgtcc
cgcaccataaagttctcctacgacctctacctggtcaccaacggaaagcacggcaagctg
gtccgaggcatttggaacgggatgattggagaggtgttctacaagcgggcggacatggcc
atcggctcgctgaccataaacgaagagcgctctgagattatcgacttctcggtgccgttt
gtggagacggggatcagcgtgatggtggccaggagcaacgggactgtctcaccatctgcc
tttttagaaccatacagtccggcggtctgggtaatgatgttcgtcatgtgtctgactgtc
gtggccatcacggtcttcgtctttgaatactgcagtccggttgggtacaaccgtagcctg
gtcagcgccaaagaacctggtggtcccaccttcaccattgggaagtctgtgtggctgctg
tggggaatcgtcttcaacaactcggtccccatcgagaacccaaagggcaccaccagtaag
atcatggtcctggtctgggctttcttcgccgtcatcttcctggcctcctacacagccaac
ctggcagccttcatgatccaggagcaatacatcgacaccgtctccggactgagtgacaaa
aagtttcaaaagccacaggagcagtaccctccgttccgctttggtacggtcccaaatggc
agcacagagcgcaacataaggagtaactaccctgagatgcactcccacatggtcaaatac
aaccagaagggagtggaggatgcccttaacagcctcaaaacagggaaactggatgccttt
atctacgatgctgctgtgctgaattacatggctggcaaagacgagggctgcaagctggtg
accattggcagcgggaaagtatttgccaccactggttatggcatcgccctgcagaaggat
tcacgctggaaacgacacatcgacctggccctgctacagttcctggctgatggtgacaca
cagaagctgcagaccgtctggctcacaggcatctgccgcaatgagaagaaagaggtgatg
agcagcaagctggacatcgacaacatggcgggggtcttctacatgctgcttgtagccatg
ggcctgagcctgctggttttcgcttgggaacatctgctctactggaaactacgacattca
gtccgcaaagcagagcgactaaacttccttctagccatcagtagaggcatctacagctgc
tttaatggcgtagagcatactgaccacagcgacagcatgccaagtccggatgtcactacc
aactacacacaggccaatatgctaaagatgctgaagacggccaaggacatggtgtcctct
gccagagtggagaactctctagacaatgctaccaagacaatagagaactggagcaggcgg
ggggtcgacaatgtgcgggttggcctgccacccagagtgacgaccacagacatgactcat
ggccgtctgccctacatctccagcatctcggacaaccactcgccgtaccctcagagggcc
ctcacacccaccttcccgattcattatggggacgccaccacccagcccctcctggagaag
ccccgcgtggtgacacgacccaccctgctccgctacacgctgcccacccgcaacagccag
cacgtcttagagaggactctgcccatctccagcctcagcagtcctcacatcgccatgcgg
gaccccgttccagccgccacttcgaacccccaccacagcagcaggctgtatgtggagaac
ccgccccggcacccaatgtccccgtttgttccttacagggagttccaggtgcccgacatc
tacgtggagcacaaagggccactgaggaggaagtttagctacccacccgactgcataaga
agaaggcgctctcatagctatgtgtatgacgctgcagacccaagagtgaggggcgactac
gatgaacctcgatcctgccttgctgagttgagggccaaccacctcctgaacaaccacgca
cccgttgctgctgccatgtcatgcactccgggacactactcaggcgccagcgcgagctgc
aactcctgcatgaagtcctatctggagcctgaaatggacgacgtaccgctcctggggaag
gacaaactcaaccgtcgcgcttcattccttaaagccacgtggggcaatgacaggatccat
caggttgatgaaacaaagccctccacatccaaatcctccggccgcatggacatgcctgac
ctgtttcctcgggtggtggtggccaacccaaagcccaacaagctctacggcagtctggga
cacaatctgtcctgctaccccttggccgctgagcccgcatacttggacccggcccacatg
ggctcctacccctacaagcagaagctcaagtactctgagtccacccggctgccctcttac
agggaagccatcctgcagaacgccgctgcactgcgtcgttcctcctctacggtggtgcac
agacactactccacctacctgaactcgtacacagacttaccggtgtacgttgggccgctt
gctcagagaccctcccagttctacgacagctccaaggacgtgtgccacttgtttccctgt
acaagccactgcccggataacgctgggatgctgcctcgtatgggtgacaggcaggtggtg
taccacaacaatatgtttgggaactatgatggcacaggaaagagggaagacccaggctct
gggaacagagaacggaggcaggtgttggtggcccgcagatccaacagtccctatgtgcca
aagccctggggcagggtatccagcctggagtctgaggtctga
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