KEGG   Anoplopoma fimbria (sablefish): 129099061
Entry
129099061         CDS       T09102                                 
Symbol
polr2f
Name
(RefSeq) DNA-directed RNA polymerases I, II, and III subunit RPABC2
  KO
K03014  DNA-directed RNA polymerases I, II, and III subunit RPABC2
Organism
afb  Anoplopoma fimbria (sablefish)
Pathway
afb03020  RNA polymerase
afb03420  Nucleotide excision repair
afb04623  Cytosolic DNA-sensing pathway
Brite
KEGG Orthology (KO) [BR:afb00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    129099061 (polr2f)
  09124 Replication and repair
   03420 Nucleotide excision repair
    129099061 (polr2f)
 09150 Organismal Systems
  09151 Immune system
   04623 Cytosolic DNA-sensing pathway
    129099061 (polr2f)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:afb03021]
    129099061 (polr2f)
   03400 DNA repair and recombination proteins [BR:afb03400]
    129099061 (polr2f)
Transcription machinery [BR:afb03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol I, II, III common subunits
     129099061 (polr2f)
  RNA polymerase III system
   RNA polymerase III
     129099061 (polr2f)
  RNA polymerase I system
   RNA polymerase I
     129099061 (polr2f)
DNA repair and recombination proteins [BR:afb03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      129099061 (polr2f)
SSDB
Motif
Pfam: RNA_pol_Rpb6 CENP-B_dimeris
Other DBs
NCBI-GeneID: 129099061
NCBI-ProteinID: XP_054464202
LinkDB
Position
11:complement(23372812..23375666)
AA seq 127 aa
MSDNEDNFDDGDFDDAEEDEGLDDLENVEDGDRENVQILPAGEGQQANAKRITTPYMTKY
ERARVLGTRALQIAMCAPVMVELEGETDPLQIAMKELKSRKIPIIIRRYLPDGSYEDWGC
DELIITD
NT seq 384 nt   +upstreamnt  +downstreamnt
atgtccgacaacgaagataatttcgacgacggtgattttgatgatgccgaagaagatgag
ggattagacgacctggaaaacgtcgaagatggggaccgggagaacgtgcagatcctgccc
gcaggagaggggcagcaggccaacgcgaagaggatcacaacaccttacatgaccaaatat
gagagagccagagtgctcgggacacgagctctccagatagcgatgtgcgctccagtcatg
gtggagctggagggagaaacagaccccttgcaaatagctatgaaagagctcaagagcaga
aagatcccaatcatcattcgcaggtaccttcctgacgggagttatgaggactggggctgt
gatgagctcatcataactgattaa

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