Anoplopoma fimbria (sablefish): 129100772
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Entry
129100772 CDS
T09102
Name
(RefSeq) LOW QUALITY PROTEIN: neurogenic locus notch homolog protein 1-like
KO
K02599
Notch 1
Organism
afb
Anoplopoma fimbria (sablefish)
Pathway
afb04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
129100772
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF
hEGF
EGF_CA
Ank_2
EGF_2
Ank
NOD
Notch
NODP
Ank_3
Ank_5
Ank_4
DL-JAG_EGF-like
EGF_3
JAG1-like_EGF2
Motif
Other DBs
NCBI-GeneID:
129100772
NCBI-ProteinID:
XP_054466215
LinkDB
All DBs
Position
13:22411755..22456161
Genome browser
AA seq
2519 aa
AA seq
DB search
MHIFFVKLTFLLSLIALTRGLRCSMPTELCLNQGRCEASLDGNGECNCRDGYTGSSCQFH
DPCTNTPCMNGGTCRAVPKGNTVDFNCTCRLGFTDRRCLTPVNNACISSPCRNGGTCELE
SLRTYKCRCPPGWSGKLCQQADPCASNPCANGGQCSAIESNFICSCTPFFSGKTCKQDVN
ECEVSQSPCKNGGACINEVGGYRCQCPQEYTGKQCESRYLPCIPSPCHNGGTCIQKGETS
YECSCVPGFTGKNCQSNIDDCPGHECHNGGTCVDGVNTYNCQCKPEFTGQLCTEDVDECQ
LMPNACQNGGTCHNTFGSYQCVCVNGWTGDDCSENIDDCASAACHQGSTCHDRVASFYCE
CPHGRTGLLCQLDDACISNPCQKGSNCDTNPVSGNHFCTCPSGYVGASCDQDVDECSLGS
NPCEHAGKCINTKGSFQCKCQRGYVGPRCELDINECMSNPCMNEATCLDQIGDFHCICMP
GYKGEFCEIDTDECAHSPCLNNGNCIDKTNAFLCQCPTGFSGNLCQIDIDECASTPCKNG
AKCTDGPNKYTCECTEGYSGRHCETDIDECYSNPCHYGTCIDGLASFSCHCNPGYTGRLC
ETNINECLSQPCRNGGTCQDRENAYTCSCPKGTTGINCEINIDDCKSNPCDYGTCIDKIN
GYECACEPGYTGTMCNINIDECAINPCHNGGTCIDGINGFTCMCPDGYQDPTCFSQVNEC
LSNPCVHGHCEDKINGYNCLCDSGWSGKNCDINNNECESNPCMNGGTCKDMTSGYVCTCR
MGFTGPNCQTNINECASNPCLNQGTCIDDVAGYKCNCVLPYTGENCETLMAPCSSKPCKH
GGVCQESEDYQSFSCVCPEGWQGQTCEVDIKECVKNPCRNGAACQNTLGSYRCACKPGFS
GRNCESNIDDCKPNPCSNGGLCKDEVNGFLCTCLAGFRGTKCEEDINECESNPCKNGANC
TDCVNSYTCTCPAGFSGIHCENNTPDCTESSCFNGGSCMDGINTFTCLCPPGFTGSYCQH
DINECDSKPCLNGGTCQDSYGTYKCTCPHGYSGLNCQNLVRWCDSSPCKNRGTCWQRGTT
YSCECETGWTGLYCDVPSVSCEVAAKQRGVDVAHLCRNSGQCLDAGNVHYCHCQVGYTGS
YCEEQVDECTPNPCQNGATCTDFLGGYTCKCMPGYVGTNCSDEINECFSQPCQNGGTCID
LINTYKCSCPRGSQGVHCEINIDDCNPFTDPVTKEPKCFNKGKCVDRVGGYHCICSAGYV
GERCEGDINECLSNPCDPRGTHSCIQLTNNYRCDCRTGYTGQRCDTVFDGCKGKPCRNGG
TCAVASNTPHGFICKCPPGFTGSTCEYDAQACGSLHCRNGGTCISGNKSPKCVCTPSFTG
PECQYPTDSPCNSNPCYNGGTCEYTSEAPFYHCVCPINFNGLRCQILDYSFQGGFGHNIP
PPSEVDVTCKIPLCEEAKHNKYCDVLCNNHACGWDNGDCSLNFDDPWKNCSASLQCWRYF
NDGKCDSQCDNAGCLYDGFDCQNLEGQCNPLYDQYCKDHYADGHCDQGCNNAECEWDGLD
CANNMPEKLALGQLVLVVHITPEQLLNNSFGFLRELSRVLRTNVVFRKNTMGKMMVYPYY
GNEHELKKYNVKRSVDSWSEVPGKVVDVVKRSLYDVAGGSRKVKRELDHLQIKGSVVHLE
VDNRQCFQQSTECFQSTNDAAAFLGALASSGKLDVPYTIEAVFSGVEPQNSQELYPIYLV
LGGIGMLAFLGVGMVAARKRRHEHGRLWLPEGFKTTETSKKKRREPVGEDSVGLKPLKNT
SDISLMDDAQNEWGEDEPSDAKRFRQFDEQAILEVGDQTDHRQWTQQHLDAADLRIPSIA
PTPPQGEIENDCMDVNVRGPDGFTPLMIASCSGGGLETGNSEEEEDASANVINDFIYQGA
NLHNQTDRXGETALHLAARYARSDAAKRLLEASADANVQDNMGRTPLHAAVAADAQGVFQ
ILIRNRATDLDARMHDGTTPLILAARLAVEGMVEELINCHADVNAIDDFGKSALHWAAAV
NNVEAVIVLLKNSANKDMQNNKEETPLFLAAREGSYETAKVLLDHYANREITDHMDRLPR
DIAQERMHHDIVRLMDDYNLVRSPHMHGGSLGTTLSPPLCSPNGYLGGMKQHQPHGQGKK
ARKPSAKGIGCKDGKDMKVKKKNSQDGKPGSLLDGSGVLSPVDSLESPHGYVSDVASPPM
MTSPFQQSPSVSLNHLQGMSDPHLSVGHMVMPNKQELARMQFDPLPPRLTHLPVSGSGGQ
GAINGQCDWLSRMHGNMSQPGQFNPMRGAPGGQGGLQHGMMTALHNGHPAAGLSQMMTYQ
GIQSTRLGPQPHILQQQQQAQQMQQMQNLQQLQQQQQQQQQQQSIQLQHQNSNATNSQSF
ISGELSSPELQQGSGNSTMPIHTILPQETQIMSSSISQSMPSTQFLTPPSQHSYSGPMDN
TPNHQVQVPDHPFLTPSPGSPDQWSSSSPHSNMSDWSEGISSPPTSMQAQIAHLPEQFK
NT seq
7560 nt
NT seq
+upstream
nt +downstream
nt
atgcatattttctttgtgaaactaactttcttgttgtcgctgatagcacttacacgaggt
ctaagatgctccatgcccacggagttgtgtttgaaccaggggaggtgtgaggcatctcta
gatggcaacggagagtgcaattgccgggacggatacacagggagcagttgccagttccat
gacccctgcaccaacacgccatgcatgaacggcggcacgtgtcgcgccgtgcccaagggg
aacacggtggacttcaactgcacctgcagactgggcttcaccgaccgccgctgcctgacg
cccgtcaacaatgcctgcatcagctcgccgtgtcgcaacggaggcacctgcgagctggag
agcctcaggacgtacaagtgccgctgcccacctggatggtcaggtaaactgtgccaacaa
gccgacccctgtgcctcaaacccgtgcgccaacggcggccagtgctccgccattgagtcc
aacttcatctgctcctgcacgcccttcttctccggaaagacctgcaagcaggacgtcaac
gagtgcgaagtgagccagtccccttgcaagaatggcggggcgtgcatcaacgaggtcggc
ggctaccggtgccagtgcccgcaggagtacacgggcaagcaatgcgagagccgctacctg
ccctgcatcccgtcgccctgccataacggaggcacctgcatccagaagggagagaccagc
tatgagtgctcctgtgtgccaggttttacaggaaaaaactgccaaagcaacatcgatgat
tgcccaggtcacgagtgccacaatggagggacatgtgtagatggagtcaacacttataac
tgccagtgtaaaccagagtttacaggtcagctctgcacagaggacgttgacgagtgccag
ctgatgcccaacgcctgccaaaatggcggcacgtgccacaacaccttcggcagctaccag
tgcgtgtgcgtgaacggctggaccggcgacgactgcagcgagaacattgatgattgtgcc
agtgctgcgtgccaccaaggctccacctgtcacgaccgcgtggcttctttctactgcgaa
tgcccccacggacgcacaggactgctctgccagctggacgacgcctgcatcagcaaccct
tgtcagaaaggctccaactgtgacaccaaccccgtcagcgggaatcacttctgtacctgc
ccatcaggatacgtcggagcctcctgcgatcaggatgttgacgagtgctcgctgggttcc
aacccgtgtgagcacgcagggaagtgcataaacaccaagggttcgttccagtgtaagtgc
cagcggggttacgtggggccgcgctgcgagctggacatcaacgagtgcatgtccaacccg
tgtatgaatgaggccacctgcctggaccagataggagacttccactgcatctgcatgcca
ggttacaagggggagttctgcgagatcgatacggacgagtgcgcccacagcccctgcctg
aacaacggcaactgtatcgacaagaccaacgccttcctctgccaatgccccacaggcttt
tctgggaacctttgccagatagacatcgatgagtgtgcaagcacgccgtgcaaaaatggc
gccaagtgcacagacggacccaacaagtacacctgcgagtgcactgaaggttactctggg
aggcactgtgagacggacatcgacgagtgttactccaacccgtgccactacggcacctgc
atcgatggcctggcctccttcagctgccactgcaaccccggatacaccggccggctgtgt
gaaaccaacatcaacgagtgtctgagccagccgtgcaggaacggaggcacctgccaggac
cgggagaacgcctacacctgcagctgcccgaagggaaccaccggaatcaactgcgaaatc
aacatcgacgactgcaagagcaacccctgcgactatgggacctgcatcgacaagatcaat
ggctacgagtgcgcctgcgaacccggctacacgggcaccatgtgtaacataaacatcgac
gagtgcgccatcaacccttgccacaatggcggcacctgtatcgacggcatcaacggcttc
acctgcatgtgtccagacggctaccaggaccccacctgcttctcccaggtcaacgagtgc
ctcagcaacccctgcgtccacggtcactgcgaggacaagatcaacggctataactgtctg
tgtgattcgggctggagcggtaaaaactgtgacatcaacaacaacgagtgtgagtccaac
ccatgtatgaacggaggcacctgcaaggacatgaccagcggatacgtctgcacctgtcga
atgggcttcactggaccaaactgccagaccaacatcaacgagtgtgcctccaacccctgc
ctcaaccaggggacgtgcattgacgacgtcgcgggctacaagtgcaactgcgtcctgcct
tacacgggagagaactgtgaaaccttgatggctccctgcagctccaaaccctgcaagcat
gggggagtgtgtcaggagtcggaggactatcagagcttctcctgcgtctgtcctgaagga
tggcaaggacaaacatgtgaggtggacatcaaagagtgtgtgaagaatccctgtcgcaat
ggagcagcctgccagaacactttgggcagctaccgctgtgcctgcaaaccgggcttcagt
ggacgcaactgtgaaagcaacatcgacgactgcaagcccaacccctgcagcaatggaggc
ctctgcaaggacgaggtgaacggcttcctgtgcacctgcctggccggctttcggggcaca
aagtgcgaggaggacatcaacgagtgcgagagcaacccgtgcaagaacggagccaactgc
accgactgcgtcaacagctacacctgtacctgcccggccggcttcagcgggatccactgt
gaaaataacacccccgactgcactgagagctcctgcttcaatggcggctcctgtatggac
ggcatcaacaccttcacgtgtttatgtccgccgggcttcaccggcagctactgccagcat
gacatcaacgagtgtgactccaaaccctgcctgaacggcggcacctgccaggacagctac
ggcacctacaagtgcacctgcccacacggatacagcggcctcaactgtcagaacctggtc
cgctggtgcgactcgtcaccctgtaagaaccgggggacctgctggcagcggggaaccacc
tacagctgcgagtgtgagactggctggacgggactctactgcgacgtcccgagtgtctcc
tgtgaggtggcggccaaacagagaggagtcgacgtcgcccatctgtgtcgtaactcgggt
cagtgtctggacgcaggaaacgttcactactgccactgccaggtcggatataccggaagt
tactgtgaggagcaggtggacgagtgcaccccgaacccctgtcaaaacggagccacctgt
acggactttttaggcggatacacctgcaagtgcatgccaggatacgttgggaccaactgc
tcggacgagatcaatgaatgtttctcccaaccgtgccagaacgggggcacctgcattgac
ctgatcaatacctacaaatgctcctgtcccaggggaagccaaggtgtgcactgtgagatc
aacatcgacgactgcaacccgttcaccgacccggtcaccaaagagcccaagtgcttcaac
aaagggaagtgtgtggatcgagtgggaggctaccactgcatctgctctgcaggatacgta
ggggagcgctgcgagggcgacatcaacgagtgtctctccaacccatgtgacccgcggggc
acgcacagctgcatccagctcaccaacaactaccgctgcgactgtcgcaccggatacaca
ggtcaacgctgtgacacagtgtttgatggatgtaaggggaaaccgtgtcgcaatggagga
acctgtgctgtagcaagtaacacgccacatggcttcatctgcaaatgtcctcctggcttc
actggctccacgtgtgaatatgacgcccaggcctgcggcagcctccactgccgcaacgga
ggcacctgcatctccggcaacaagagtcccaagtgtgtgtgcaccccgtcgttcaccggg
cccgagtgccagtatcccaccgacagcccctgtaactccaacccctgctacaacggcggc
acctgcgaatacacgtccgaggcgccgttctaccactgcgtctgcccgatcaacttcaac
ggcctccgctgccaaatcctggactacagcttccagggaggcttcggccacaacatcccg
ccgccgtccgaggtggacgtcacctgcaaaatcccgctgtgcgaggaggcgaagcacaac
aagtactgcgacgtgctctgtaacaaccacgcgtgcggctgggacaacggggactgctcg
ctcaacttcgacgacccgtggaagaactgctcggcctcgctgcagtgctggcggtacttc
aacgacggcaagtgcgactcgcagtgtgacaacgccggatgtctctacgatgggtttgac
tgccagaatctggagggacagtgcaatcctctgtatgaccagtactgcaaggaccactac
gccgacggccactgcgaccagggctgcaacaatgccgagtgcgagtgggacggcttggac
tgtgccaacaacatgcccgagaagctcgccctgggccagctggtcctggtggtccacatc
accccggagcagctcctcaacaactccttcggcttcctgcgcgagctgagccgcgtcctc
cgtaccaacgtggtattcaggaagaacaccatgggcaagatgatggtgtacccgtactac
gggaacgaacacgagctgaagaagtacaacgtcaagcgctcggtggattcgtggtccgag
gttcccgggaaggttgtggatgtggtgaagaggagcctgtatgatgtggcaggcggcagc
aggaaagtgaagagggaactggatcacttgcagatcaaaggttccgtcgtccacttggag
gtggacaaccgccagtgcttccagcagtccactgagtgtttccagagcaccaatgatgct
gcagctttcctcggggctctggcctccagcggcaaactggacgtcccctacaccattgaa
gcagtttttagcggagtggaaccccagaattcacaggagctctacccgatctacttggtg
ctgggcggcatagggatgctggccttcctcggagtggggatggtggctgcccgaaagcgc
cgccatgagcacgggcgcctctggctccccgagggcttcaagaccacagagaccagcaag
aagaagagacgtgagcctgtcggagaggattccgtgggattaaagccactgaaaaacacc
tcagacatttcactcatggatgacgcccagaatgaatggggagaggacgagccctcggat
gcaaaacgcttcaggcagtttgacgagcaggctatcctggaggtgggcgaccagacggac
caccgccagtggacgcagcagcacctggacgccgctgacctgcgcatcccctccattgct
cccacaccgcctcagggcgagattgagaatgactgcatggatgtcaatgtccggggacca
gatggattcacacctctgatgatcgcgtcctgcagcgggggaggtttagaaacgggcaac
agcgaggaggaggaggacgcctctgccaacgtgatcaacgacttcatctaccagggcgct
aacctgcacaaccagaccgaccgcnacggggagaccgccctccacctggccgcccgctac
gctcgctccgacgccgccaagcgcctgctggaggccagcgccgatgccaacgtccaggac
aacatgggcaggacgccgctgcatgctgctgtggctgctgatgcacagggggtgttccag
attctgattaggaaccgcgcaacagacttggatgcccgcatgcatgatggcaccacaccc
ctgatcttggctgccaggctggcggtggagggcatggtggaggagctcataaactgccac
gctgacgtcaatgcaatcgatgatttcggtaaatcagccctacattgggccgcagcagtg
aataacgtggaggctgtaatcgtgcttctcaagaacagcgccaacaaggacatgcaaaac
aacaaggaggaaacccctctattcttggctgccagggaaggaagctacgagactgccaag
gtcttactggaccactacgccaacagagaaataaccgaccacatggaccggctacccaga
gacatcgcgcaggagaggatgcatcacgacatcgtgcggctgatggacgactacaacctg
gtacggagtcctcacatgcatggagggtcgctcggcaccaccttgtcgcctcctctctgc
tcgcccaacggctacctgggcggcatgaagcagcaccagcctcatggccagggcaaaaag
gcccgcaagcccagcgccaagggcatcggctgcaaggacggcaaagacatgaaggtgaag
aagaagaactcgcaggacgggaagcccgggagcctcctggacggctccggtgtgctgtca
ccagtcgactcgctggagtccccgcacggctacgtctccgatgtggcctcgccgcccatg
atgacctcaccgttccagcagtcgccatctgtgtccctgaaccacctgcagggtatgtcc
gatccacacctgtccgtgggccatatggtgatgccgaacaagcaggagctggctcggatg
cagttcgacccgctgcctccccgtctcacccatctgcccgtgtctggctccggtggccag
ggcgccatcaacggccagtgcgattggctgtccaggatgcacggcaacatgagccaaccg
ggccagttcaaccccatgagaggagctcccggtggtcagggaggcctgcagcacgggatg
atgacggccctccacaacggccaccccgccgccggcctgtctcagatgatgacctaccag
gggatccagagcaccaggctgggtccgcagccccacatcctgcagcagcagcagcaggct
cagcagatgcagcagatgcagaacctgcagcagctccaacagcagcagcagcagcagcag
cagcagcagagcatccagctgcagcaccagaactcgaacgcgaccaacagccagagcttc
atcagcggggagctcagttccccggagctccagcagggcagcggcaactccaccatgccc
atccacaccatcctgccgcaggagacccagatcatgtcctcctccatcagccagtcaatg
cccagcacccagttcctcaccccgccctcccagcacagctattcaggccccatggacaac
accccaaaccatcaggtccaagtgcccgaccacccctttctgaccccctcccccggctcc
cccgatcagtggtccagttcgtcccctcattccaacatgtccgactggtcagagggcatt
tcaagtccgccgacaagcatgcaggctcagattgcacatctacctgaacagttcaaataa
DBGET
integrated database retrieval system
