Anoplopoma fimbria (sablefish): 129100947
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Entry
129100947 CDS
T09102
Symbol
si:dkey-32e23.4
Name
(RefSeq) dynamin-1-like protein
KO
K17065
dynamin 1-like protein [EC:
3.6.5.5
]
Organism
afb
Anoplopoma fimbria (sablefish)
Pathway
afb04217
Necroptosis
afb04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09140 Cellular Processes
09143 Cell growth and death
04217 Necroptosis
129100947 (si:dkey-32e23.4)
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
129100947 (si:dkey-32e23.4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
afb04131
]
129100947 (si:dkey-32e23.4)
03029 Mitochondrial biogenesis [BR:
afb03029
]
129100947 (si:dkey-32e23.4)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
afb04147
]
129100947 (si:dkey-32e23.4)
Enzymes [BR:
afb01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.5 Acting on GTP to facilitate cellular and subcellular movement
3.6.5.5 dynamin GTPase
129100947 (si:dkey-32e23.4)
Membrane trafficking [BR:
afb04131
]
Endocytosis
Clathrin-mediated endocytosis
Dynamin
129100947 (si:dkey-32e23.4)
Lipid raft mediated endocytosis
Caveolin-mediated endocytosis
129100947 (si:dkey-32e23.4)
RhoA-dependent endocytosis
129100947 (si:dkey-32e23.4)
Mitochondrial biogenesis [BR:
afb03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Fission and Fusion factors
129100947 (si:dkey-32e23.4)
Retention of mitochondria
129100947 (si:dkey-32e23.4)
Exosome [BR:
afb04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
129100947 (si:dkey-32e23.4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dynamin_M
Dynamin_N
GED
MMR_HSR1
AAA_16
Motif
Other DBs
NCBI-GeneID:
129100947
NCBI-ProteinID:
XP_054466483
LinkDB
All DBs
Position
13:complement(133603..140822)
Genome browser
AA seq
660 aa
AA seq
DB search
METLIPTINRLQEVFLTVGAEVIQLPQIVVVGSQSSGKSSVLESLVGRDFLPRGSGIVTR
RPLVLQLVNVAPLQERVKTENGVKAEEWGTFLHCKNQIFTDFQEIRREIEAETERSSGDN
KGISPEPIYLKIFSPKVLNLSLVDLPGITKVPVGDQPEDIEAQVQEMILSFISNPNCLIL
TVSPANSDLATSDALKLAREVDTDGRRTLLVVSKLDLMDAGTDALEVLLGRVIPVRLGII
GVVNRSQHDINTQKNLEDSTRDEQAFLQRHYPSLASRSGSRYLAKTLSRLLMHHIRDCLP
ELKTRVTVLSAQYQARLNGYGQPVEDHSSTLLQIVTKFASDYCNTIEGTARYIQTSELCG
GARICYIFHETFGRTLQSIDPLGGLTELDILTAIRNATGPRPALFVPEVSFELLVKRQIK
RLEEPSMRCVELVHEELQRIIQHCSSYSTQELLRFPKLHDSIVEVVTGLLRKRLPITNEM
VHNLVSIELAYINTKHPDFTDAAQVCASVNSQQAEALDGGKRWKNEKVAEERVPAAGFGS
PSKGHAINLLDTAVPVSRKLSSKEQRDCEIIQRLIKCYFLIVRKSIQDSVPKTVMHFLVN
FVKEHLQSELVGQLYKQSLLQELLIESQDTAQQRTEVAQMLEALQKANNIICEIRETHLW
NT seq
1983 nt
NT seq
+upstream
nt +downstream
nt
atggagactctaattcccaccatcaaccggctgcaggaggtcttcctcactgtgggtgca
gaggtcatacagctgccgcagatagtcgtcgttggatctcagagcagtggaaagagctct
gtgttggagagcctggttggacgggacttcttgcctcgaggatcaggaatagtaacaaga
cgacccctcgtgttgcaacttgttaatgttgccccactgcaggagagagtgaaaaccgaa
aatggggtcaaagcagaagaatggggtacattcctgcactgcaagaaccagatcttcaca
gattttcaggaaattcgtcgtgaaattgaagcagagactgaacgcagttcaggtgacaac
aagggtatcagtcctgagcccatatatttgaagattttctcccccaaagtccttaatctc
agcctggttgatttacctggaatcactaaggttcctgttggggaccagccagaggacatt
gaggcacaagtacaagagatgatcctgtccttcatctccaatccaaactgcctcatcctc
acagtgtctcctgccaactctgacttggccacctcagatgctctgaaattggctcgtgag
gttgatacagatggtcgtcgaacactgctggtggtcagtaagctggacctgatggatgca
gggactgatgctctggaggtccttttgggtcgagtcattccagtcagactcgggattatc
ggtgttgttaacaggagccagcatgacatcaatacccagaagaacctcgaggactcaacg
agggatgagcaggctttcctgcagcggcactacccctcgctagcctcgcgctccggctca
cgctatctggccaaaaccctcagcaggctgctcatgcatcacatccgggattgcctgccg
gagctcaagacccgtgtgaccgtgctgagtgcccagtaccaggcacggctcaatggctat
ggccagccagtagaagaccacagctccaccctgctgcagattgtcaccaagtttgccagc
gattactgcaacaccatcgagggaactgccagatacatccagacctcagagctctgtggg
ggtgctcggatctgttacatattccatgagacctttgggcgcactttgcagtccattgac
cccctgggaggattgactgagcttgatatcctcactgctatccgaaatgctacgggtccg
cggccagcactttttgtgcccgaggtgtcctttgagttgttagtgaagcggcaaattaag
cggctggaggagcccagtatgcgctgtgtcgagctggttcatgaagagctgcagaggatc
atccagcactgctcctcctatagcacacaggagcttctgcgattccccaaactgcacgat
tccattgtggaagtggtgactggattactaaggaagcgcttgcccattactaatgaaatg
gtgcacaatttagtatcaatagagctcgcctacatcaacacaaaacatccagacttcacg
gatgcagcgcaggtctgtgcatctgtcaacagtcagcaggcggaggcccttgatggagga
aagcgctggaaaaacgagaaggttgcggaagagagagtcccagctgcaggctttggcagt
cccagcaaaggccatgccattaacctgcttgacacagcggtgccagtatcacgcaagctg
agttcaaaggagcagagggactgcgagattatccagcgcctcatcaagtgctacttcctt
attgtccgcaaaagcatccaggacagtgtgcccaagacagtgatgcacttcctggtaaac
tttgtgaaagagcatctgcagagtgagctggtgggtcagctttacaagcagtcactgctg
caggagctgctcattgagtcacaggacacggcacagcagcggaccgaggttgctcaaatg
cttgaggctctccaaaaagccaataacatcatctgtgagatccgtgagacacatctgtgg
tag
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