Anoplopoma fimbria (sablefish): 129101168
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Entry
129101168 CDS
T09102
Name
(RefSeq) glutamate receptor ionotropic, NMDA 1-like
KO
K05208
glutamate receptor ionotropic, NMDA 1
Organism
afb
Anoplopoma fimbria (sablefish)
Pathway
afb04020
Calcium signaling pathway
afb04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
129101168
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
129101168
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
afb04040
]
129101168
Ion channels [BR:
afb04040
]
Ligand-gated channels
Glutamate (ionotropic)
129101168
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GFIT
Motif
Pfam:
Lig_chan
ANF_receptor
Lig_chan-Glu_bd
SBP_bac_3
Peripla_BP_6
Ion_trans_2
SIP
DUF6724
Motif
Other DBs
NCBI-GeneID:
129101168
NCBI-ProteinID:
XP_054466814
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Position
13:complement(28819236..28858884)
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AA seq
858 aa
AA seq
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MNAISVTHKPNAIQMALSVCEDLISNQVYAILVSHPPQSNDHLTPTPVSYTAGFYRIPVV
GLTTRMSIYSDKSIHLSFLRTVPPYSHQAHVWFDLMREFRWNHIILIVSDDHEGRAAQKR
LETLLEERETKAEKVLLFSPDTNLTALLLEAKDLEARVIILSASEDEAAAVYKAARQLNM
TGSGYVWLVGEREMTGKALSEAPDGLLGLQLINGKNESAHIADAVAVVAQSLQELFEKEN
ITEPPRGCVGNTNIWRTGPLFKRVLMSSKYPDGLTGRIEFNDDGDRRFATYSILNYQQKP
GRLVQVGVFNGSQVVMNPQRKIIWPGGETEKPVGYQMSTKLKIVTIHQEPFVYVKPTKTD
GTCREEYTLNGVLIKKVICTGPNGTTPGQPIVPQCCYGFCVDLLIKLAMSMNFTYEVHLV
ADGKFGTQERVNNSNKKEWNGMMGELLGGLADMIVAPLTINNERAQYIEFSKPFKYQGLT
ILVKKEIPRSTLDSFMQPFQSTLWLLVGLSVHVVAVMLYLLDRFSPFGRFKVNSEEEEED
ALTLSSAMWFSWGVLLNSGIGEGAPRSFSARILGMVWAGFAMIIVASYTANLAAFLVLDR
PEERITGINDPRLRNPSDKFIYATVKQSSVDIYFRRQVELSTMYRHMEKHNYESAAEAIQ
AVRDNKLHAFIWDSAVLEFEASQKCDLVTTGELFFRSGFGIGMRKDSPWKQNVSLAILSS
HENGFMEDLDKTWVRYQECDSRSNAPATLTFENMAGVFMLVAGGIVAGIFLIFIEIAYKR
HKDARRKQMQLAFAAVNVWRKNLQDRKSRAEPESQTSFRSITTTSDLQRRRASGDATPYP
TDITGQLNLSDPSVSTVV
NT seq
2577 nt
NT seq
+upstream
nt +downstream
nt
atgaacgccatctccgtcacgcacaaacccaacgccatccagatggccctgtccgtgtgc
gaggacctcatctccaaccaggtctatgcgatcctggtcagtcaccctcctcagtccaac
gaccacctgaccccgacccccgtctcctacaccgccggattctaccggatccccgtggtc
ggcctgacgacacgcatgtccatctactccgacaagagcatccacctgtccttcctgagg
acggtgcctccgtactcacaccaggctcacgtctggttcgacctgatgagggagttcagg
tggaaccacatcatcctcatcgtcagcgacgaccacgaaggacgagccgctcagaagaga
ctggagacgctgctggaggagagggagaccaaggcggagaaggtgcttctgttcagcccg
gacaccaacctgacggctctgctgctggaggccaaagacctggaggcccgagtcatcatc
ctgtctgccagtgaggatgaagcggccgccgtgtataaagcagcccgtcagctcaacatg
accggctccggttacgtctggctggtgggagagagagagatgacgggaaaggctctgagt
gaagctccagatggcctgctgggcctccagctgattaacggtaagaacgagtcggcccac
atcgcggacgccgtggccgtggtggctcagtctctgcaggagctgtttgagaaggagaac
atcacggagcctccgcggggctgcgtggggaacaccaacatctggaggaccggcccgctc
ttcaaacgagtgctgatgtcatccaagtaccccgacggtctaactggacggatcgagttt
aacgacgacggcgaccggcgcttcgccacctacagcatcctgaactaccaacagaagcca
ggtcgcctggtccaggtcggagtcttcaacggatctcaggttgtgatgaaccctcagagg
aagatcatctggcctggaggagagacagagaaaccagtcggataccagatgtctacgaaa
ctgaagattgtgacgatccatcaggagccgtttgtttacgtgaagccgacgaagactgac
gggacgtgtagagaagagtacacgctgaacggagtactgatcaagaaggtgatctgtacc
ggacccaacggcaccacaccaggtcagcccatcgtccctcagtgttgctatggtttctgc
gtcgacctgctcatcaaactggccatgagcatgaacttcacctacgaggttcacctggtg
gctgatgggaaatttggcacacaggagcgcgtgaacaacagtaataagaaggagtggaac
gggatgatgggggagctgttaggaggtctggccgatatgatcgtggctcctctcaccatc
aacaacgagcgcgctcagtacatcgagttctccaaacccttcaagtaccagggcctcacc
atcctggtgaagaaggaaatccctcgcagcactctggactcgttcatgcagccgttccag
agcacactgtggctgttagtcggtctgtcggtccacgtggtggcagtgatgctttaccta
ttagaccggttcagcccgtttggaaggtttaaagtgaacagtgaagaagaagaagaagac
gccctcaccctgtcctccgccatgtggttctcatggggagtactgttgaactctgggatc
ggagaaggagctcccaggagtttctcagcgaggattctgggtatggtgtgggcgggtttt
gctatgatcatcgtagcgtcatatactgccaacctggcagccttccttgtgttggaccgg
cctgaggagcgcatcactggcatcaacgaccccaggctgcgtaacccgtcggataagttc
atctacgccacagtgaagcagagctcggtggacatctacttcagacggcaggtggagctg
agcaccatgtaccggcacatggagaagcacaactacgagagcgccgccgaggccatccag
gccgtcagagacaataagcttcatgccttcatctgggacagcgccgtgctggagttcgag
gcatcacagaaatgtgatctggtgacgacaggagagctgttctttcgctccggatttggg
attggaatgaggaaagacagtccgtggaaacagaacgtttctctggctattctcagctct
catgagaatggcttcatggaggatctagacaagacgtgggttcgataccaggagtgtgac
tccaggagcaacgcccccgctacgctcaccttcgagaacatggcaggtgtgttcatgctg
gttgctgggggcatcgtcgccgggatcttcctcatcttcatcgagatcgcttacaaacga
cacaaagacgctcgcaggaaacagatgcagctggccttcgctgctgtgaacgtttggagg
aagaacctgcaggataggaaaagtagagcagagcccgagtcccaaacctcttttaggtcc
atcactacgacctccgacctccaacgccgtagggcctccggggacgccacgccgtacccg
actgacatcaccggccagctcaacctatcagatccctccgtcagcaccgtcgtctga
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