Anoplopoma fimbria (sablefish): 129101216
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Entry
129101216 CDS
T09102
Symbol
prdm6
Name
(RefSeq) putative histone-lysine N-methyltransferase PRDM6
KO
K20795
[histone H4]-lysine20 N-methyltransferase PRDM6 [EC:
2.1.1.361
]
Organism
afb
Anoplopoma fimbria (sablefish)
Pathway
afb00310
Lysine degradation
afb01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
129101216 (prdm6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
afb03000
]
129101216 (prdm6)
03036 Chromosome and associated proteins [BR:
afb03036
]
129101216 (prdm6)
Enzymes [BR:
afb01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.361 [histone H4]-lysine20 N-methyltransferase
129101216 (prdm6)
Transcription factors [BR:
afb03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
129101216 (prdm6)
Chromosome and associated proteins [BR:
afb03036
]
Eukaryotic type
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
129101216 (prdm6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRDM2_PR
zf-C2H2
SET
zf-H2C2_2
zf-C2H2_4
Zap1_zf1
zf-C2H2_jaz
Motif
Other DBs
NCBI-GeneID:
129101216
NCBI-ProteinID:
XP_054466889
LinkDB
All DBs
Position
13:complement(27754777..27829741)
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AA seq
569 aa
AA seq
DB search
MLKPGDPSGSAFLKVDPSYLQHWQQLFPQAQLKAPHPPHPPHPPHPPPPPDRLSIPMDAL
RPSRLHSHLLASTHCTSSSSSSSTSSSASSSAAAALTPSSSSISISSSAGISQLPVPQQI
ALFGQALAPVCAGPGGGGGGGGGGGPGGDLMGGVGKPARFRLTSEELDYYLYGQQRMEII
PLSNQTGELNNRCDMCADNRNGECPMHGPLHSLRRLVGTSSTAAPVTLPDVPDWLRDLPR
EVCLCTSTVPGLGYGICASQRIPQGTWIGPFQGIPLLLDKLHSGAVRNSRHLWEIYDAEG
TLQHFIDGNDPSKSSWMRYIRCARHCGEQNMMVVQYRSCIFYRACMDIPRGTELLVWYND
SYTSFFGIPLQCVAQDENLNVPNTVIEAMTRQESLQSFSKNGKPSSSSSSSSSSSSSTPS
TALMRSMVFPHSPCPRNFSLMDKVGIGVQSDISYGQLGSKNQRILASPTSTSQLSSDFSD
WHLWKCGQCFKTFTQRILLQMHVCPQNPDRPYQCGHCSQSFSQPSDLRNHVVTHSSDRPF
KCGYCGRAFAGATTLNNHIRTHTGEKPFK
NT seq
1710 nt
NT seq
+upstream
nt +downstream
nt
atgctgaagccgggcgacccgagcggctcggccttcctgaaggtggatccgtcctacctg
cagcactggcagcagctcttccctcaggcgcagctgaaggctcctcatcctcctcatcct
cctcatcctcctcatccacctcctccacccgaccgcctctccatccccatggacgccctg
cgcccgtcacgtctgcacagccacctcctggcctccacgcactgcacctcctcctcctcc
tcttcttctacgtcgtcctcggcctcctcctcagctgcagcagctctcaccccgtcctcc
tcctccatctccatctcctcctccgcagggatctcacagctgcccgtcccacagcagatc
gctctcttcgggcaggcgttggccccggtgtgtgccgggcctggaggaggtggaggaggt
ggaggaggaggaggaccaggaggagatctaatgggtggtgttggtaaaccggcccggttc
aggctgacgtcggaggagctggactactacctgtacggacagcagaggatggagatcatc
cctctgagcaaccagacgggagagctcaacaaccgttgcgacatgtgtgcagacaacagg
aacggcgagtgtccgatgcacggccctcttcactctctgcggcgcctcgtcggcaccagc
agcacggcggcgcccgtcacgctgccggacgtccctgattggctcagagatctgccccga
gaggtgtgtctctgcaccagcacggttcctggtctgggttatgggatctgtgcgtctcag
aggatccctcagggaacctggatcggcccgttccagggaatccctctgctgctggacaaa
ctgcactctggagccgtcaggaacagcagacacctgtgggagatctacgatgcagagggg
acgttacagcactttattgacggtaatgatcccagtaagtccagctggatgaggtatatc
cgctgtgccagacactgtggggagcagaacatgatggttgtacagtacaggtcctgtatc
ttctacagagcgtgcatggatatccccagaggaacagagctgctggtttggtacaacgac
tcctacacttccttcttcggcatcccgctgcagtgcgtcgctcaggacgaaaacttaaat
gtcccaaacacagtcatagaagcgatgaccaggcaggagtcccttcaatccttcagcaag
aacggcaaaccctcctcctcctcctcctcctcctcatcttcctcctcctccaccccctcc
accgccctcatgcgctccatggtcttcccccactccccctgccccaggaacttctccctc
atggacaaggtcgggatcggggttcagtcggacatcagttacggccagctggggtcaaag
aaccagcggatcctggcgagcccgacctccaccagccagctcagcagcgacttcagcgac
tggcacctgtggaagtgcggccagtgcttcaagaccttcacccagaggatcctgctgcag
atgcacgtctgtccgcagaacccagacaggccgtaccagtgtggccactgctcccagtcc
ttctcccagccatcagatctgaggaaccacgtggtgacgcactccagcgaccgacccttc
aaatgcggatactgcggccgggcgttcgccggcgccacgacgctcaacaaccacatccgc
acgcacaccggggagaagccgttcaagtaa
DBGET
integrated database retrieval system
