Anoplopoma fimbria (sablefish): 129102051
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Entry
129102051 CDS
T09102
Symbol
apc
Name
(RefSeq) LOW QUALITY PROTEIN: adenomatous polyposis coli protein
KO
K02085
adenomatosis polyposis coli protein
Organism
afb
Anoplopoma fimbria (sablefish)
Pathway
afb04310
Wnt signaling pathway
afb04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
129102051 (apc)
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
129102051 (apc)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
afb01009
]
129102051 (apc)
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
afb03036
]
129102051 (apc)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
afb04812
]
129102051 (apc)
Protein phosphatases and associated proteins [BR:
afb01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
129102051 (apc)
Chromosome and associated proteins [BR:
afb03036
]
Eukaryotic type
Centrosome formation proteins
Other centriole associated proteins
129102051 (apc)
Cytoskeleton proteins [BR:
afb04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
EB / APC
129102051 (apc)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
APC_r
Arm_APC_u3
APC_rep
APC_N_CC
Arm
SAMP
Suppressor_APC
APC_15aa
APC_u14
Sec7-like_HUS
Motif
Other DBs
NCBI-GeneID:
129102051
NCBI-ProteinID:
XP_054467959
LinkDB
All DBs
Position
14:935197..956010
Genome browser
AA seq
2304 aa
AA seq
DB search
MAAASYDQLLRQVEVLKMENSNLRQELQDNSNHLTKLESEASNMKEVLKQLQGTIEEDSG
EASGSQLELIERLKEMSLESAGFKPRSRPPLPPSSSSSSTSSGSSAPGGAAGGSGAPGPS
TTTGFPRRGLPTAGRDSHDRCLEELEKERSLLLAELEKEEKEKDWYYAQLQNLTKRIDSL
PLTENFTLQTDMSRRQLEFEARQIRSAMEEQLGSCQEMERRAQDRVSRIQQIDKDILRLG
ARLQVEEAPGASDSSGLAGAQSSSSRLEHEPANETSYSVPRRITSHLGTKVEMVYSLLSM
LGTHDKDDMSRTLLAMSSSQDSCIAMRQSGCLPLLIQLLHGNDKDSLLLGNSRGSKEARA
RASAALHNIVHSQPDDKRGRREIRVLHLLEQVRHYCEECWSWQENHERGVDQEDNPMPSP
VEHQICPAVCVLMKLSFDEEHRHAMNELGGLQAVAELLQVDCEMFGLSSDHYSVTLRRYA
GMALTNLTFGDVANKATLCSMKGCMRAMVAQLKSDSEDLQQVIASVLRNLSWRADVNSKK
TLREVGSVRALTGCALEVQKESTLKSVLSALWNLSAHCTENKADICAVDGALAFLVGTLT
HRSHTNTLAIIESGGGILRNVSSLIATNEAHRQILREHGCLPTLLQHLKSHSLTIVSNAC
GTLWNLSARDSKDQEALWELGAVGMLRNLIHSRHKMIAMGSAAALRNLMANRPARYKDAS
VVSPGAGXPSLHARKQKALFEELDAQQLSETFDNIDNLSPKAAHRKGRGCNGAGGAGAGN
PTRSYTNTPVLSSPKNGDGSKRTTEEVPYARPVFPPXVRASSDSLNSVTSADGYGNRGKT
KPSTEPFYSSDESGVNKCCVYRKYPADLAHKIRSANHMADDDGGELDTPINYSLKYSDEQ
LNSGRQSPSHRGSIESDEEDELGARLRRRNDGNDQAPTGSRIASPASSRYVAAAATSNFG
GDATVEQPIDYSLKYGADAARKPLFKQEETAAPSGPPPPSSSSNKLRPPPPPANRTVPKG
NQEATQTYCVEDTPICFSRGSSLSSLSSEEEEEDGDVIGKKRRGGRGGGGGNDYPTLPVS
EKDAHEQQQRQQKEAESQTASAAAAAAAAAAAPSSRGRRGHHHHHGHAHHHHHHHVASSS
GARTPKSPPEQPYAQETPLMFSRCTSVSSLDSFSTSSIASSVRSSEPCSGMPSGVVSPSD
LPDSPGQTMPPSRAKTPPMPPPTQNTKQEEKTKKKKDEEESSADVLLHFATESTPHGFSR
ASSLSALSLDEPYIAAEMRGKKEDEEGGNEERKDEEAGEPILDESDDDDDIEILEACINM
AMPKSSRKPKKQQQQQQQQAAPRKPSQLPVYKLHPPQSRTQSQQRKDVPPPPEEVPRVYC
VEGTPLNFSTATSLSDLTIDSPPNEETVAAVAPSAPPNSVQRRGAGLPEGENGDDILAEC
ISAAMPKAKPRKPIRASVNSEHLQAPPLPPAVPPPLGLQQQKKKPTSPVKPMPQRAGYAV
TTSTAAKAKPGFAFDSPHHYTPIEGTPCCFSRNDSLSSLDFDEDDGGEKDEEKKTKEEEG
RKRKQQTAAVFPRTKPATNATASDERQKFAIEDTPVCFSRNSSLSSLSDIDQENNNKEFA
PPPPKEKDGGKVGKKSPPPPQEELKPRPSAASGYAPKAFHVEDTPVCFSRNSSLSSLSID
SEDDLLQECISSAMPKKKKKAAAAAAAAPVATTLPAPKAEDDILAEEEPSEAPRSPASPD
SETFDWKAIQEGANSIVSSLNAAAAAATPLSRQPSSDSDSVLSLKSVGSPFRMPAANNNA
EEEGEEKEEAAMKRGARILKAGERTTLEAKKKKEEQEEEEEAAKALRGGKKVYRSLITGK
LRAEPAARGRSKPRALPVAKPPGSNDGADRGGGSSRDSTPSRSSSAAANQKGGKLLQMPR
TASPGSASSSSSSASRPAKQSGAPRSGGGGGGGGIPRSESASRVSGSTAAKKQKAEPEKP
ALVRQSTFIKEAPSPTLKRKLEESAAAVVVTALESPSSPDAPLPLTTRRHDVNRSHSESP
SRPQEVTSSRFSRTGTWKRESSSAGGRRRGSSGKHSTSLPRVGTWKRTGSSSSVLSASSE
SSEKGRSEEESAVRSKGTWRKAKSSGGGDSAGRFSDKSEDVWVRLEDCPVNNPRSSSSCS
ARSPTTANAPPVIDSPASSKIPSSSSSSSSNLNLRRSCESLDDKPPLTPERPQQQPQQQQ
RSQQRSGAVAARVSPFNYTPSPRKSNTDVTTTPTPTTTTSSSPSSTTPTRPSLIPTAVAK
KREPKGGXGGGSGGERGSYIVTSV
NT seq
6915 nt
NT seq
+upstream
nt +downstream
nt
atggcggcagcgtcttacgaccagctgctgagacaggtggaggtgctaaagatggagaac
tctaacttgcgacaggagctgcaggacaactccaaccatctgaccaaactggaaagtgag
gcctccaacatgaaggaagtgctgaagcagctgcagggcaccatagaagaagactctgga
gaggcgtctggctctcagctggagctcatcgaaagactgaaagagatgagcctggagtct
gcagggtttaagcccaggtcgaggcctcctctgcccccctcgtcctcctccagctccacc
tcctctggttcttcagctcctggaggagcagctggaggctccggagctccaggcccctcg
accaccaccggcttccccaggagagggctgccgactgcgggcagagacagccacgaccgc
tgccttgaggagctggagaaagagaggtctctcctattggctgagctggagaaggaggag
aaggagaaggactggtactacgctcagctgcagaatctcaccaagaggatcgacagtctg
ccgctcaccgagaacttcactctgcagacggacatgagtcggcgtcagctggagttcgag
gcccgtcagatccgctcggcgatggaggagcagctgggttcctgtcaggagatggagagg
agagctcaggatcgcgtgtcccgtattcagcagatagataaagacatcctgagactggga
gcccgactacaggtggaggaggctccgggggcgagcgacagcagcggattggccggagct
cagagctccagcagccggttagaacacgagccggccaatgagacaagctactctgtgcct
cgacgaatcaccagccacctcggcaccaaggtggagatggtgtatagccttctgtcaatg
ctggggactcacgataaagacgacatgtcgcggacgctgctcgccatgtcgagctctcag
gactcgtgcatcgccatgcgtcagtctggctgcctgccgctgctcatccagctgctgcac
ggcaacgacaaggactccctgttgctaggtaactctcgtggcagcaaggaggcccgtgcg
cgagcatcggcggcgctgcacaacatcgtccacagtcagcccgacgacaagagaggccgg
cgtgagatcagagtgctccacctgttggagcaagtgcgacattactgcgaggagtgctgg
agctggcaggagaaccacgagaggggcgtcgaccaggaggacaaccccatgccgtctcca
gtggagcatcagatctgtccggccgtctgcgtcctcatgaagctttcctttgatgaagaa
catcgacacgccatgaacgaactcggcggtctgcaggcggtggcggagctgctgcaggtg
gactgtgagatgttcggtctgagcagcgatcattacagcgtcaccctgaggagatacgcc
ggcatggcgctcaccaacctcacctttggagacgtagccaataaggccacgctgtgctcc
atgaagggctgcatgagagcgatggtcgctcagctgaagtccgacagtgaagacctgcag
caggtgatagcgagtgtgttgaggaacttgtcgtggcgtgccgatgtcaacagtaagaag
acgctgcgtgaggtcggcagcgtgcgggcgctgacgggctgcgctctcgaggtccagaag
gagtcgactctgaagtccgtactgagcgcgctctggaacctgtcggctcactgcacggag
aacaaggcggatatctgcgcggtggacggcgctctggcgtttctggtgggaaccctgacg
caccgcagccacaccaacacgctcgccatcatcgagagcggcggcggaatcctccgcaac
gtgtccagcctcatcgccaccaacgaagcgcacaggcagatcttacgtgagcacggctgc
ctgccgactctgctgcagcacctgaagtctcacagtttgaccatcgtgtccaacgcctgc
gggacgctctggaatctgtcggccagagactccaaagaccaggaggcattatgggagctg
ggcgccgtcggcatgctgcgcaacctcattcactcccgtcacaagatgatcgccatgggc
agcgccgccgccctccgtaacctgatggccaaccggccggcccgctacaaggacgccagc
gtggtgtcgccgggcgccggcngcccgtcgctgcacgcccgcaaacagaaggcgttgttt
gaggagctggacgcccagcagctgtcagagactttcgacaacatcgacaacctgagcccc
aaagcggcgcacaggaaggggcggggctgcaacggcgctggaggagcaggagcagggaac
ccgacacgctcgtacaccaacacgccggttctgtcgagcccgaagaacggagacggatca
aaaaggacgactgaggaagtgccgtacgctcggccggtgttccccccangcgtccgagcg
tccagcgacagcctgaacagcgtgacgagcgccgacggatacggaaaccgcggcaagacg
aaaccgtcgacggagccgttctactcgtccgacgagagcggagtcaacaagtgctgcgtc
tacaggaagtacccggccgacctggcgcacaagatccgcagcgccaaccacatggcggac
gacgacggcggggagttggacacgcccatcaactacagcctgaagtactcggacgaacag
ctgaactctgggagacagagtccgagtcaccgtggcagcatcgagagcgacgaggaggac
gaactgggcgccaggctgaggagacggaacgacggcaacgaccaggcgccgaccggcagc
cgcatagcgtccccagcatcctcgcgctacgttgctgccgcggcaacgtcaaactttggc
ggtgacgcaacagtcgagcagccaatcgactacagcctgaagtacggcgctgacgccgca
cgcaaaccgctgttcaagcaagaggagaccgccgctccctctggcccgcctcctccgtca
tcctccagcaacaagctccgcccccctccgcccccagccaatcgcacagtgccaaaaggc
aaccaggaggcgacacagacgtattgcgtggaggacacgcccatctgcttctccagaggc
agctctctctcctcgctgtcctccgaggaggaagaggaagacggcgatgtcatcgggaag
aagagaagaggagggaggggcggcggcggcggcaacgactacccgacacttcctgtcagc
gagaaagacgcacacgagcagcagcagaggcagcagaaggaggcggagagccagaccgcc
agtgctgctgctgccgccgccgctgctgccgctgctccctcctctcgaggaaggcgtggt
caccaccaccatcacggccacgcccaccaccatcaccaccaccacgtggcgtcgtcatcg
ggcgccaggacgcctaagagtcctccggagcaaccgtacgctcaggagacgccgctgatg
ttcagccgctgcacgtcggtcagctccctggacagcttctccacctcctccatcgctagc
tccgtgcgctccagcgagccgtgtagcggcatgccgagcggcgtcgtcagccccagcgac
cttcccgacagcccgggtcagaccatgccgccgagccgcgccaagacgccaccgatgccg
ccaccaacgcagaacacaaagcaggaggagaagaccaagaagaagaaggacgaggaggag
agcagcgctgacgtcctgctgcatttcgccacggagagcacgccacacggcttctccaga
gcctccagtctgagcgccctcagtctggacgagccgtacatcgcggcagagatgaggggt
aagaaagaggatgaggagggagggaacgaggagaggaaggacgaggaggcgggggaacca
atccttgacgagtctgacgacgacgacgacatcgagatcctggaggcgtgcatcaacatg
gccatgcccaagtcgtcacggaaaccaaagaagcagcagcagcagcagcagcaacaagca
gcgccaaggaaacccagccagcttcctgtttataagctccacccacctcagagccgcacc
caatcacagcagaggaaggacgtgcctccgccgccggaggaggtgccgagagtttactgt
gtggaaggaacgccgctcaacttctccaccgccacctcgctcagtgacctcactatcgac
tccccgcccaatgaggagacagtagccgctgtcgcaccttcagccccgcccaactccgtc
cagaggaggggggccggactacccgaaggcgagaatggtgacgacatcctcgccgagtgc
atcagcgctgccatgcccaaagccaaacccagaaaaccaatcagagcatcggtgaacagc
gagcaccttcaagccccgcctctccctcctgcggtcccgccccctctcggcctgcagcag
cagaagaagaagccgacctcgccggtgaagccgatgccccagcgggcggggtacgccgtc
accacgtcaacagctgccaaagcaaaaccagggtttgccttcgactcgccgcatcactac
acgcccatcgagggaacgccgtgctgcttctcacgcaacgactcgctgagctcgctcgac
ttcgacgaggacgacggcggcgagaaggacgaggagaagaaaacaaaagaagaagaaggc
aggaagaggaagcagcagacggcggccgttttcccccgaacgaaacccgctaccaatgcg
acggcgtccgatgagaggcagaagttcgccatcgaggacacgcccgtctgcttctccagg
aactcgtctctgagctcgctgagcgacatcgaccaggagaacaacaacaaggagttcgct
ccgccgccgcccaaggagaaagatggaggcaaggtgggaaaaaagtctcctcctccccca
caggaagagttgaagccccgcccctctgcggcgagcggctacgctcccaaagcgttccac
gtagaagacacgccggtctgcttctccaggaactcctcgctcagctcgctgagcatcgac
tcggaggacgacctgctgcaggagtgcatcagctccgccatgcccaagaagaagaagaaa
gctgcagccgccgccgcggccgcacccgttgccacgacacttcctgctcccaaagcagag
gatgacattttggcagaggaggagccttcagaggcgccaagaagccccgcctccccagac
tctgagacatttgattggaaggcgatccaagagggcgccaactccatcgtcagcagcctg
aacgctgccgccgccgccgccacgccgctgtcacgccaaccgtcatcagactccgactcg
gttctctccctgaagtctgtgggctcgccgttccgcatgccagcagccaataacaacgca
gaagaagaaggggaggagaaggaggaggcggcgatgaagcgaggggcgaggattctgaag
gccggagaacgcaccacgctggaggccaagaagaagaaggaggagcaggaggaggaggag
gaggcagcgaaggcgttgagaggcgggaagaaggtgtacaggagtctgatcacagggaag
ctgagggcggagccagctgccagggggcggagcaagcccagagcgttacccgtggccaaa
cctccaggtagcaacgacggcgctgacagaggaggcgggtcctctcgggactccacgccg
tctcgctcttccagtgcagcagccaatcagaaaggagggaagctgcttcagatgccgcgt
acggcgtctccaggaagtgcatcatcatcgtcatcttcagcctccagaccggccaaacag
agcggagcgccgaggagcggcggcggcggcggcggtggaggcatcccaaggagcgagtca
gcgtcgagggtcagtggctccacggccgccaagaagcagaaggcggagccagagaagccg
gcactcgtccgtcagtcgaccttcatcaaagaagctccgagtccgacgctgaagaggaag
ctggaggagtcggcagcggcggtggttgtgacggcgttagagtcgccgtccagccccgat
gcaccgctaccgttaacgaccaggagacacgacgtcaaccgctcgcactctgagagcccg
tcacgcccacaggaagtgacatcatcacggttcagccgcacgggaacctggaagcgggag
agtagcagcgctggggggaggaggagggggagcagcggcaaacactcgacatcgttacct
cgcgtggggacgtggaagaggacggggagctcgtcgtcggtgctgtctgcatcgtcggag
tccagcgagaaggggcggagcgaggaggagagcgccgtgaggtcgaagggaacgtggagg
aaggcgaagagcagtggcggcggcgactcagccggacgcttctccgacaaatcagaagac
gtgtgggttcgtctggaggattgtcccgtcaacaacccgcgctcctcctcttcctgttcg
gctcgctcgccaaccaccgccaacgccccgcccgtcatcgacagccccgcctcctccaag
atcccctcctcctcctcctcctcgtcctccaacctcaacctgcgccggagctgcgagagc
ctcgacgacaaaccgccgctgacgccggaacgcccgcaacaacaaccgcagcagcagcag
cgcagtcagcagcggagcggcgccgtggcggcccgagtcagccccttcaactacacgcca
agcccgaggaagagcaacaccgatgtcaccaccacgcccacgccaaccaccacgacatca
tcgtcaccttcatcaacgacccccacgcgaccttcactcatccccacggccgtcgctaag
aaacgggagccgaagggcggcnngggcggcggcagcggcggggagcgtggctcgtacatc
gtgacgtccgtgtga
DBGET
integrated database retrieval system
