Anoplopoma fimbria (sablefish): 129102404
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Entry
129102404 CDS
T09102
Symbol
grin1a
Name
(RefSeq) glutamate receptor ionotropic, NMDA 1a isoform X1
KO
K05208
glutamate receptor ionotropic, NMDA 1
Organism
afb
Anoplopoma fimbria (sablefish)
Pathway
afb04020
Calcium signaling pathway
afb04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
129102404 (grin1a)
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
129102404 (grin1a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
afb04040
]
129102404 (grin1a)
Ion channels [BR:
afb04040
]
Ligand-gated channels
Glutamate (ionotropic)
129102404 (grin1a)
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GFIT
Motif
Pfam:
Lig_chan
ANF_receptor
Lig_chan-Glu_bd
SBP_bac_3
Ion_trans_2
Peripla_BP_6
Motif
Other DBs
NCBI-GeneID:
129102404
NCBI-ProteinID:
XP_054468505
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Position
14:complement(22274670..22306759)
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AA seq
938 aa
AA seq
DB search
MRLFLLAVLLSCSCARAGCEPKIVNIGAVLSQKRYEQVFKDAVTQANQVYGRDKFKLTAI
SVTHKPNAIQMALSVCEDLISSQVYAILVSHPPQSNDHLTPTPVSYTAGFYRIPVVGLTT
RMSIYSDKSIHLSFLRTVPPYSHQAHVWFDLMREFNWNHIILIVSDDHEGRAAQKRLETL
LEERETKNKKRNYENLDQLSYDNKRGPKAEKVLQFSQETNLTALLLEAKELEARVIILSA
SEEDAAAVYKAARFLNMTGSGYVWLVGEREMSGKALSEAPDGLIGLQLINGKNESAHIND
AVAVVAQSIQELFEKENITEPPRGCVGNTNIWKTGPLFKRVLMSSKYPEGLTGRVEFNDD
GDRKYAHYSILNYQKSRLIQVGIYNGTQVVMNNQRKIIWPGGETEKPQGFQMSTRLKIVT
IHQEPFVYVKPTQLDGTCKEEMTLNGVLIKKVICTGPNETIPGRPIVPQCCYGFCVDLLI
KLAMTMNFTYEVHLVADGKFGTQERVNNSNKKEWNGMMGELLGGLADMIVAPLTINNERA
QYIEFSKPFKYQGLTILVKKEIPRSTLDSFMQPFQSTLWLLVGLSVHVVAVMLYLLDRFS
PFGRFKVNSEEEEEDALTLSSAMWFSWGVLLNSGIGEGAPRSFSARILGMVWAGFAMIIV
ASYTANLAAFLVLDRPEERITGINDPRLRNPSDKFIYATVKQSSVDIYFRRQVELSTMYR
HMEKHNYESAAEAIQAVRDNKLHAFIWDSAVLEFEASQKCDLVTTGELFFRSGFGIGMRK
DSPWKQNVSLAILSSHENGFMEDLDKTWVRYQECDSRSNAPATLTFENMAGVFMLVAGGI
AAGIFLIFIEIAYKRHKDARRKQMQLAFAAVNVWRKNLQDRKSGRAEPDPKKKASFRSIS
TTLASSIKRRRSSKDTQYPPTDITGQLNLSDPSVSTVV
NT seq
2817 nt
NT seq
+upstream
nt +downstream
nt
atgcgtctgttcctgctggcggtgctcctctcctgctcctgcgctcgggccggctgcgag
ccgaaaatcgtgaacatcggggccgtgctgagccagaagagatacgagcaggtcttcaaa
gatgcggtgacccaggccaaccaggtctacggcagggataaattcaagctgaccgccatc
tctgtaacgcacaagcccaacgccatccagatggctctctccgtctgcgaggacctcatc
tccagccaggtctacgctatcctggtgagtcaccctccccagtccaatgaccacctcact
ccaacgcctgtctcatacactgcaggcttctaccgcattcccgtggtggggctcaccacc
cgcatgtccatctactcggacaagagtatccacctgtccttcctgcggacggtccctccc
tattcccaccaagcgcacgtgtggttcgacctgatgcgcgagttcaactggaaccacatc
atcttgatagtgagcgacgaccacgaggggcgggccgctcagaagaggctcgagaccctc
ttggaggagagagagacaaagaataaaaaaaggaactatgaaaacctcgaccaactgtcc
tatgacaacaagcgaggacctaaggcagagaaagtcctccagttcagtcaggagactaac
ttaactgccctgctgctggaggcgaaagagctggaggcccgagtcatcatcctgtccgcc
agtgaggaggacgctgccgcagtgtacaaggctgcccgcttcctcaacatgacgggctcg
gggtacgtgtggctggtgggcgagcgggagatgtcgggtaaagccctgagcgaggcgcca
gacggtctgattggcctccagctcatcaacgggaagaatgagtcagcccatatcaatgat
gcggtggctgtggtggctcagtccatccaggagctgtttgagaaggagaatatcacggaa
cccccgagaggatgtgtgggcaacaccaacatctggaaaacagggccactctttaaacgg
gtgctgatgtcatctaaatacccagagggcctcacaggacgcgtggagttcaatgacgac
ggagacaggaagtacgcccattacagtatactcaactaccagaagagtcgactcattcaa
gtcggcatttacaatggaacacaggtggtgatgaacaatcagcggaagatcatctggccc
ggaggagagactgagaaaccgcagggcttccagatgtccactcgattaaagatagtgacg
atacaccaggagccatttgtgtatgtgaaacccactcagctggacggaacatgcaaggag
gaaatgactttaaatggagtcttaattaaaaaggttatctgcactgggcccaatgagacc
atcccaggacgtccaattgtgccccaatgttgttatggattctgtgttgatctcctcatc
aagttggctatgacaatgaacttcacctatgaggtgcatctggtggctgatgggaaattc
ggaactcaggagcgggtgaacaacagtaacaagaaagagtggaatggcatgatgggagag
ctcctggggggcctggctgacatgattgtagccccactgactataaacaacgaacgagcc
cagtacatcgagttctccaaaccctttaaatatcaaggcctcaccatccttgttaaaaag
gaaatccctcgcagtacgctggactcgttcatgcagccgttccaaagcacgctgtggctg
ctggtgggtctttcggtgcatgtggtggcggtgatgctttacctactagaccggttcagc
ccgtttggaagatttaaagtaaacagtgaagaggaagaagaagatgccctcaccttatca
tctgctatgtggttctcctggggagtgttgctgaactctggtataggagaaggtgcgccg
cgcagcttctcagcgagaatcctgggcatggtgtgggccggatttgccatgatcattgtg
gcttcttatactgccaacctggctgccttccttgtgttggaccggcctgaggagcgcatc
accggcatcaacgacccaaggctgagaaacccatccgacaagttcatctacgccacggtg
aagcagagctccgtggacatctacttccggcggcaggtggagcttagcaccatgtaccgc
cacatggagaagcacaactatgagagtgccgccgaggctatccaggccgtgcgtgacaac
aagctgcatgctttcatctgggactctgcggtgctggagtttgaagcttcgcagaagtgc
gacctggtgaccacgggagagctgtttttccgctcgggctttggcataggcatgcgcaag
gacagcccctggaaacagaatgtgtccctggccattctcagttctcatgagaacggcttc
atggaagacctagataaaacctgggtgagataccaggagtgtgactcacggagcaatgcc
ccagccacactcacctttgaaaacatggcaggggtcttcatgcttgtggcaggaggaata
gccgcagggatcttcctaatcttcattgaaatcgcctataagcggcataaagacgcccgc
aggaagcagatgcagctcgcctttgcggcggtcaatgtttggaggaagaacctgcaggat
aggaaaagtggtagagcagagcccgaccccaaaaagaaagcctcttttaggtccatcagt
accaccttggcctccagcatcaagagacgtaggtcctccaaagacacgcagtacccaccc
actgacatcacgggccaactcaacttgtctgacccgtctgtcagtactgtggtataa
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