Anoplopoma fimbria (sablefish): 129106909
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Entry
129106909 CDS
T09102
Symbol
esr1
Name
(RefSeq) estrogen receptor
KO
K08550
estrogen receptor alpha
Organism
afb
Anoplopoma fimbria (sablefish)
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
afb03000
]
129106909 (esr1)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
afb03310
]
129106909 (esr1)
Transcription factors [BR:
afb03000
]
Eukaryotic type
Zinc finger
Cys4 estrogen receptor-like
129106909 (esr1)
Nuclear receptors [BR:
afb03310
]
3. Estrogen like
3A. Estrogen receptor
129106909 (esr1)
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GFIT
Motif
Pfam:
Oest_recep
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
129106909
NCBI-ProteinID:
XP_054474158
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Position
18:10744919..10756947
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AA seq
620 aa
AA seq
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MLLRESPAQSRQPCGPVLRPRISPALSELETLSPPHPSPPPRAHFSDMYPEESRGSGGLG
TVDFLEGTYDYAAPTPAQTPLYSHSTPGYYSAPLDSHGPPSDGSLQSLGSGPTSPLVFVP
SSPRLSPFLHPPSHHYLETSSTPVYSQQSVSREDQCGTSDESYSLGESGAGAGAGGFEMA
KETRFCAVCSDYASGYHYGVWSCEGCKAFFKRSIQGHNDYMCPATNQCTIDRNRRKSCQA
CRLRKCYEVGMMKGGVRKDRGRVLRRDKRRTGTSDRDKASKDLEHRTVPPQDGRKRSSSS
ACGGGKSLLTNMPPDQVLLLLQCAEPPILSSRQKLSQPYTEVTMMNLLTSMADKELVHMI
AWAKKLPGFLQLGLHDQVQLLESSWLEVLMIGLIWRSIHCPGKLIFAQDLILDRNEGDCV
EGMAEIFDMLLATASRFRLLKLKPEEFVCLKAIILLNSGAFSFCTGTMEPLHDTAAVQHM
LDIITDTLIHHISQSGCPVQQQPRRQAQLLLLLSHIRHMSNKGMEHLYSMKCKNKVPLYD
LLLEMLDAHRLHRPERPGEPWFNADGEPLSTTSNDNISISGGGSSSGGSSSGPRDSHESP
SRAPTVLQYGGSHSDCPHIL
NT seq
1863 nt
NT seq
+upstream
nt +downstream
nt
atgttgctcagggagagcccggcgcagagtaggcagccttgtggaccagtactcagaccc
aggatcagcccagccctctcagaactggagaccctctccccgccacatccctcgcctcca
ccacgtgcccacttcagtgacatgtaccctgaagagagccgggggtctggagggttaggc
actgtggacttcctggaagggacatacgactatgcggcccccacccctgcccaaactcct
ctttacagccactccacccctggctactactctgctcctcttgactcccacggaccaccc
tcagatggcagccttcagtctctgggtagtgggcctaccagccctctagtgtttgtgccc
tccagccccagactcagcccctttttgcatccacccagccaccactatctggaaaccagc
tcaacacccgtctacagtcagcagtcagtttccagagaggaccagtgcggcaccagtgac
gagtcatacagtctgggggagtcgggggctggagcgggggcaggggggtttgagatggcc
aaagagacgcgtttctgtgctgtgtgcagtgactatgcctctgggtaccactacggggtg
tggtcctgtgagggctgcaaggccttctttaagaggagcatccagggtcacaatgactat
atgtgcccagcaaccaatcagtgtactattgacaggaatcggaggaagagctgccaggct
tgccgtttaaggaagtgttacgaagtgggcatgatgaaaggaggtgtgcgcaaggaccgt
gggcgtgttttgcgacgtgacaaacgacggactggcaccagtgacagagacaaggcctct
aaggacctggagcacaggacagtgcctcctcaggacgggaggaaacgcagcagcagcagt
gcttgcggtggaggaaaatccttgctgactaacatgcctcctgaccaggttctcctcctg
ctccagtgtgccgagcccccaatactgtcttctcgtcagaagctgagccaaccctacacc
gaggtcaccatgatgaacctgctcaccagcatggccgataaggagttagtccacatgatt
gcctgggccaagaagcttccaggtttcctgcagctgggcctccatgaccaggtgcagctg
ctggagagctcctggctggaggtcctgatgatcggcctcatctggaggtccatccactgc
cccggcaaactcatctttgcacaggaccttatactagacaggaacgaaggcgactgtgtt
gaaggcatggctgagatcttcgacatgctgttggccactgcttcccgcttccgcctgctc
aaactcaaacctgaggagtttgtctgtctcaaagctatcatcttgcttaactcgggtgcc
ttctctttctgcacaggcacgatggagcccctccacgacaccgcagcagttcagcacatg
ctggacatcatcacagacactctcatacatcatatcagccaatcaggttgcccggttcag
cagcagccgagacggcaggcccagctgctcctcctgctctcccacatcagacacatgagc
aacaaaggcatggagcatctctacagcatgaagtgcaagaacaaagtgcctctgtacgac
ctgctgcttgagatgcttgatgctcaccgcctccaccgcccagaaagaccaggtgagccg
tggttcaatgctgatggagagcctctctccaccaccagcaacgacaacatcagcatcagt
ggcggcggctcttcttcaggtggttccagttcaggacccagagacagccatgagagcccg
agcagagcccccaccgtcctgcagtatgggggctcccattctgattgcccccacatccta
tga
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