Anoplopoma fimbria (sablefish): 129107904
Help
Entry
129107904 CDS
T09102
Name
(RefSeq) zinc finger homeobox protein 3-like
KO
K09378
zinc finger homeobox protein 3
Organism
afb
Anoplopoma fimbria (sablefish)
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
afb03000
]
129107904
Transcription factors [BR:
afb03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ZF
129107904
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Homeodomain
zf-C2H2
Homeobox_KN
zf-C2H2_jaz
zf-C2H2_4
zf-Di19
zf-H2C2_5
zf-met
Motif
Other DBs
NCBI-GeneID:
129107904
NCBI-ProteinID:
XP_054475488
LinkDB
All DBs
Position
19:3679725..3691272
Genome browser
AA seq
2728 aa
AA seq
DB search
MDSGEGGGGDGGGGEERDADLSPQALSLPLLTLAVVPEQGSSSHTSAMAPAKEPLTLPQQ
EEEGVEGSQAREETQGGEQKEGIRHSQENGACQKQGMKEDFGEGYLSGQRKEEGEVHVGV
GEASVTGGLPAALSSRGGEEEEEKEEEEAISNQSQTKSKCSLLPQQSQHSSSSSTAKASG
TLDSKTAASPKPSPTPSTSPKPSPFLSAPPKHFTCPSSSSALLSETEVNDIKGDQGWISE
FPQSFKSQQSTLAFTLAGTDPASTPAEDDGPAGAPHSSISDGDGAKAPEPNDSQLDTEVD
DERDKEEEQKEAVLKNLNQDLSPNSLTSHMTIMHSRNSCKTLKCPKCNWHYKSQHTLQVH
MKEKHPETGGQCVCSYCSSGKPHPRLARGETYACGYKPYRCEVCDYATSSKGNLSIHMQS
DKHLNNVQSGGHSNGIIHTSHITTNNSSSSEVNAVDEPTYMPPLPTPTPAIQPTKLTPPT
HTHSHGKRWRCDVCDYETSIARNLRIHTTSEKHTHNMLRLQRGYYLSHCRSLAPQLKHLQ
NAGAELSLNMRLTSQQVADQPVTLGSTLTPSPSPSPSLFQCLVCSCFSSDSLESVEQHLN
APRSLPQSEWCSLVAGGCHCRLCGYTTALRANFSLHCQTDRHRTRYQLAAHLQEGGDRGQ
EGAAIIAKGNPIQLRCNLCDYVTSSLDKLRGHSLSSHHEASVRVYRFLQQYDGEVDGGSW
LFHCLLCNHSSSSKLQVLKHSQTPTHQQREGLLQLQPMGGEELAAIFTIRKSPDGVTEEL
SEDMETSSETTTGPLDTTKDTYNLGAKQIAEETEETMEEEREKRESFPSVKRPSSQCEEM
ENSISTKRPRIHQQNPNQQTVQCPLCQVKLQLTNLRQHLTQVHSVAQDCVDKLISTVTLS
MEQPQPQLQTEPQTDDTQKNKNTKNTNANCSNTADSSASVDSQKNQGISVETTEGDVAAP
KDVTALLTPPLEDNTTHPSNVRLAPQSPTQTPLLPDRRPPPLSDRHGYRFRCSRCSLAFP
TQEKLELHWQYHAMRAATECPLCSRQCRSQEALQRHMQNTHSQLDNTQGDNTVLPPHTAQ
NMELNKSSVQQDFSLSPQVGQEAGEGEDEETEEEALGMEGKEQQKEEFKEKDVMGEVDGD
EDSITEPEKGPHDEIISEPTSSLFVKKSSNPTMDRYLDPTRPYKCTICSESFTQKTILLV
HYNSVSHLHRARRALQDSGTGVAVPEAPRGPDPRPYRCRLCGVGYSQSSTLDIHLRSVLH
QTRARAAQNSAQQTPTSSVVAPVSVPTTATQASTNREETSKGLPFTKRPDVVSSSTSLLL
GSGLAAEAQPTLPIPTNSQQAKSRVAELIASRNQLMLIQQQQLAQAQAQAQAQLQQHTAL
LQSQLMQHLPLGTENLLKQHFSLAPDNLLSLQQQLLLPFYLSGDLNINPELTVKSLDLSQ
FIYANSIPKEQVKVEVKRESQPQMDEKQTQRQRSNSAVSQPKDRVQCEAKVEAGCSGTAN
NQSEEGHSYSYLEKEKEELSVPTVGLQCPPPRVPYTAVNGEPVRALLQSYGYELALQYIQ
SRHRHQQQIPTHMIPDKLECSYINKMEVCSEEERLELSGLQDGKLEGCNKDQNGVEGNGE
IESDKKKKDEESVNKVKGCCGRGEKCRDCGKFFSDALILKSHREYIHRKLFPTPALERFS
REYRLQYDQMYPLTQPKSGENSTASAAAPVPSSESETAPEPVMPQVKSLTPSPEPSFSDP
ITKTFALATDLTTTAPKPSSSPFLSQSQEFPQQDAPIPSTSATTISQTTSPANAIPLTLP
KIPMPPLALPQLPVAQLPLPKLSLPNIPFSMDLPLLSPVMMQSMGLQPQTWFDSSVNPEL
AKLYQSQLNQALLGQQPQLSPSLLVQQPQLSPALQGQPSQINSALLSQHSQPSPIQTGQQ
PQVSPTILEQGKRTRTRISEEQLTVLRKHFDINSLPSEEEMNKMSALSGLPHKVIKHWFR
NTLFKERQRDKDSPYNFNNPPTIALEETRVEAQNPSPQPQTTDLLRGEPHRGRRSSRTRF
TEQQLETLQGVFEVTPYPREEEYDSLSALLSLPNRIIVVWFQNARQRARKNQDQGTDDGL
EGKNQLDNIHRQRNGCYKNDDDNNSGGDDAHDESQNENSMDLTYEYYTNPDSPVLDSSSH
CIESEHPTASGEPTPVTRKQEDKTISSQANLDLVQTQNGISDADIQLKDIVPAMKIRSSP
QPEPNLQPESTPERPQHCSSSSSQKTVHTITSTAHSSQGHTCSPPSDPTVEKPVETSPSL
PAASESDTSYIRLPDATSGLSTENQQKKPLKPQTQAQFQCSLCPVSLPSFQLWQEHQTRH
LLAAQSQVQFLHSGFTDRTMPYMMLHPNHTLMASQMLSGAINNLTSLSQSSLTPMKQNSK
LMSEISYESQRGSREIEEDHRRDKRQRTTITPEQLEVLYQRYSMDSNPTRGVLEGIARDV
GLTRRVVQVWFQNTRARERKGQFRSMGPGSSFTLGLNHLRCPFCRALFKVKSALDAHMRS
RHWAEAERAGYNLSMSNGSNGQIGMAMSSVMDRPGPSISSNLIPNHGYVIINKELSMKLP
VTSLSSTTDLNNPEDDDDYEEDDEEYPCEEGSSTADQGSPSPEGSGGPSSDWGEMQSLQQ
HQHQQQRQRTQMSHFQVLQLRDFYRSHRTPNRHECETLGQELGLPHRVVQVWFQNARAKE
KRARSLSSDSAEREQAELSAGAGERDRA
NT seq
8187 nt
NT seq
+upstream
nt +downstream
nt
atggacagcggtgagggaggcggaggggatggagggggaggagaggagagagatgctgac
ctcagtccccaggctttatctcttcctctcctgaccctagcggtcgttccggagcaaggg
tcatcttctcatacctcagccatggcccctgccaaagagcccctgaccctgcctcagcag
gaggaggagggcgtagaggggtcccaggctagagaagagacccagggaggtgagcagaaa
gaaggaatccgacattcacaggagaatggagcgtgtcaaaagcaggggatgaaggaagac
ttcggggagggatatttgtcagggcaaaggaaggaagaaggggaggtgcatgtaggtgta
ggagaggcgtcagttacagggggcctcccagcagcccttagcagcagagggggagaggag
gaggaggagaaggaagaggaggaggccatctcaaaccaaagccaaaccaaatccaaatgt
tctttattacctcaacagagccagcacagctcttcttccagcactgcaaaggccagtggc
acactcgacagcaaaacagccgcctctccaaagccctcccccactccttccacttctcca
aagccctccccttttctttccgcccctccaaagcacttcacttgtccgtcctcatcttct
gccctgctgagcgagacagaggtaaacgacattaagggagatcagggctggatttctgag
tttcctcagagctttaaatcccagcagtctactcttgcttttacactggcaggcacggat
cctgccagtacacctgctgaggatgatgggccggcaggggcccctcactcttccatttcc
gacggagatggtgccaaagctccagaaccaaatgacagccagctagacacagaggtggat
gacgagagagacaaagaagaagaacagaaagaagctgtccttaaaaaccttaaccaagac
ctctctcctaattcactgaccagtcacatgaccataatgcactcacgcaactcctgcaaa
acgctgaaatgccccaagtgtaactggcactataagtctcagcatacactgcaagtccac
atgaaagagaaacatccggagacgggaggccaatgtgtgtgttcctattgcagctcgggg
aaaccccatccgcgcttggcccgtggcgaaacctacgcctgtggctacaagccctaccgc
tgtgaggtgtgtgactatgctacctcatcgaaaggcaacctcagcatacacatgcagtcg
gataaacaccttaacaacgttcaaagtgggggacactcgaatggtatcattcacacttcc
cacattaccacaaacaacagcagctcctccgaggttaacgccgtggatgagcccacatac
atgcccccacttcctactcccacgcctgctatccagcccaccaagctcacaccacccaca
cacactcactctcatggtaaacgttggcggtgtgatgtgtgcgactatgagaccagcatt
gcccgcaacctgcgcatacacaccaccagcgagaaacacacacataacatgctacggctc
cagagaggatactacctgtctcactgtaggagtcttgccccgcagctgaaacacttacaa
aacgcaggtgcggagctctccttgaacatgcgactgaccagtcaacaagtcgcagatcag
ccagtcacccttgggtctacactgactccttctccctccccctccccctccctgtttcaa
tgccttgtctgctcctgcttttcgtccgacagcttagagtctgtggagcagcacctgaac
gcccctcgctctctgccccagtctgagtggtgctccctggtcgctggtggctgtcactgc
cggctgtgcggctacaccaccgcgctgagggcaaacttctccttgcactgccagactgac
agacaccgcacccggtaccagcttgccgctcacctccaggagggtggggacaggggtcag
gaaggggctgccattattgctaagggcaaccccatccagctgaggtgcaacctgtgtgac
tacgtgaccagcagtttggacaagctgcgaggacattccctcagctcacaccacgaggcc
agcgtccgggtttaccgattcctgcagcagtatgatggtgaggttgatgggggatcttgg
ctgttccattgtctcttatgcaaccactcctcctcttctaaactacaagtactgaaacac
agtcaaaccccaacccatcagcagagggaagggctactacagctgcagccgatgggcgga
gaggagctggcagccatttttaccatcaggaaaagccctgatggtgtcacagaagagctc
agtgaggatatggaaacttccagtgagaccaccactggtcctttggacacaaccaaagac
acttataacttgggggcgaagcagattgctgaggagacagaagaaactatggaggaggaa
agagaaaagagggagtcatttccatcagtcaagcgtccatcctctcaatgcgaggaaatg
gaaaactctatttcaaccaaacgccccagaatacaccagcaaaatccgaaccagcagact
gtccagtgccctttgtgccaggttaaactccaactcacaaaccttcgacagcatctcacg
caagtgcacagtgttgcacaggactgtgtggacaagctcatcagcacagtcacactatcc
atggaacaaccccagcctcagctgcagacagaaccacagacggatgatactcagaaaaat
aaaaacaccaagaataccaatgcaaattgttccaatactgctgattccagtgcctcagtt
gattcacagaaaaaccaaggcatttcagtagagaccactgagggagatgtagccgcaccc
aaagatgtcacagctctactcaccccacccctagaagacaacaccacccacccttccaat
gtcagactggctcctcagtccccaactcagacccccctcctccccgaccggcgaccccct
cctctttctgatcgccatggttaccggttccgttgtagcaggtgcagcttggcgttcccc
actcaagagaagctcgagctgcactggcagtaccatgccatgagggcggcgacagagtgc
cccctctgctctagacaatgccgcagtcaagaggccttgcagagacacatgcagaacaca
cactcacagctggacaacacacagggagataatacagtcttaccacctcacactgcacaa
aacatggagctaaataagagttcagttcaacaagattttagtttatcacctcaagttggt
caagaagcaggagagggtgaggatgaagagacagaggaagaagcactaggcatggaggga
aaggagcaacaaaaagaagaatttaaagagaaggacgtgatgggtgaagttgatggagat
gaggacagtataactgagccagagaaagggccacatgatgagatcatatcagaacctact
tccagcttgtttgtcaagaagagctctaaccccacaatggaccgctatctggatccaacc
aggccctataaatgcacaatatgctcagaatcttttacccagaaaaccattcttctggtc
cactataactccgtgtcccatctccaccgggccagacgagccctacaggattctggcaca
ggtgttgctgtccctgaggctccccgtggcccagatcctaggccctaccgctgccgattg
tgtggagtgggctatagccagagctccacactggacatacatctccgctctgttcttcac
cagactcgagctcgtgctgcccagaactcagctcaacagacccccacatctagtgtagtt
gctccagtgtcagtccccactactgccactcaggcatccaccaacagagaagaaacatca
aagggtttgccattcaccaagaggccagatgtagtaagctcttcaacctctttactatta
ggctctggcttagcagctgaggcgcagccaacccttcctatcccaactaacagccagcag
gctaaaagtagagttgcagaacttatagcatcaagaaaccagctaatgctaatacaacag
cagcagttagcccaggctcaggcacaggcccaagctcagttacaacaacacacggctctg
ctccagtcccaattgatgcagcaccttcccttagggacagagaatctcctcaaacaacac
ttctccctggcaccagacaacttgctctctctccagcagcaacttcttctgcccttttat
ttgtcaggagacctgaatattaacccagagttaacggttaagagcctcgatcttagtcag
ttcatatatgccaactccatccccaaagaacaggttaaggtggaagttaaaagggagtcc
caacctcaaatggatgagaaacaaacccagagacaacgttcaaactcagctgttagccaa
ccaaaggatcgtgtgcagtgtgaagccaaggttgaagctggctgcagtggaactgccaat
aaccagtcagaagaaggacatagctattcttatctagagaaagaaaaagaagaactgtct
gttcctactgttggattgcagtgtcctcctcccagagtgccctatacagctgtgaatggc
gagcctgttcgagccctgctgcagagttatggctatgagttggcattgcaatacatccaa
agtagacatagacaccagcagcaaataccaacccatatgataccagataaactggagtgt
tcttatatcaacaagatggaggtatgctcagaagaagaaagacttgagctaagtggacta
caggatggaaagctggaaggctgtaacaaggatcagaatggagtagagggcaatggagag
atagaaagtgacaaaaaaaagaaagatgaggaatcagtaaacaaagtgaaaggttgttgt
ggaagaggagaaaagtgtagagactgtggcaagtttttttcagatgccttgattttaaaa
agtcaccgggagtacattcataggaaactgtttcctactcctgcgctggagaggttttcc
agagaatacaggctgcagtatgaccagatgtacccgctcacacagcctaaatctggggag
aattcaactgcttcagctgctgccccagtcccgtcctcagaatcagaaacagcaccggaa
ccagttatgcctcaagttaaaagcctcacaccctcacctgaaccgtcattttcagatccc
ataaccaaaacatttgctcttgccacagacctaacaacaactgcccccaaaccttcttct
tctccatttctttctcaatctcaagaatttccacaacaagatgcacccatcccaagcaca
tctgctacaactatttctcaaaccacatccccagctaacgccatacctcttactttaccg
aaaataccaatgcctcctttagccttgccccagcttcctgtagcccaactgcctttacct
aagctttccctacccaacattcctttttccatggaccttcctctcctctctccggttatg
atgcagtctatgggtctccagccccaaacttggtttgactcaagtgtgaaccctgagttg
gcaaaactctaccaatctcaactcaaccaagcactgctcgggcaacagccacagctcagc
ccttctttgcttgtccagcaaccccagctcagcccagctttgcaaggtcagccttcacag
ataaattctgcactgttgagtcaacactcccagccaagtcccatccaaacaggacagcaa
ccccaagtcagcccaaccatacttgaacagggtaagagaactcgaacccgaatctctgag
gagcaactgactgtcctgaggaaacactttgatattaacagcctccccagcgaggaagag
atgaacaagatgtctgctctgtctgggttgcctcataaagttatcaaacactggtttcgc
aacaccctatttaaagagcgtcagcgagacaaggattccccttacaattttaataacccc
ccaaccatagccctagaggagaccagagtagaagcacaaaacccctcaccacagccccag
acaacagacctccttagaggagagccccatagaggccgacgctcttcccgaacccgcttc
acggaacaacagctggagaccctgcagggggtgtttgaggtgactccctatcccagagag
gaagaatatgacagcttgtctgctctgttgtctctccctaacagaatcattgttgtgtgg
ttccaaaatgcaaggcagagagcccgtaaaaatcaagaccaggggacagacgatggatta
gaggggaagaaccaacttgacaacattcatagacagagaaatggctgctacaagaatgat
gatgacaataacagcggtggggatgatgcacacgatgaatctcagaatgaaaactccatg
gatctgacttatgagtattacaccaaccctgactcacctgtccttgattcttcctctcac
tgcatagaaagtgagcatccaacagccagtggtgaaccaacacctgttactaggaaacaa
gaagacaaaacaatatcttctcaggctaacctagatcttgttcaaactcaaaatggaatt
tcagatgcagacatccagcttaaggacattgttccggccatgaaaattaggtcctcgcca
caacctgagcccaatctgcagccagaaagtactccagaaagaccccagcattgctcctcc
tcctcttcacaaaaaacagtacacaccatcacgtccacagctcattccagccaggggcat
acatgcagccctccttctgatcccactgttgaaaagcctgtcgaaacatcacccagcctc
cctgctgcttcagagtctgacacaagctacattcggctacctgatgccacctctggccta
tccactgaaaaccagcaaaaaaaaccgctcaaaccccaaacgcaggctcagttccagtgc
agtctctgcccagtgtccttgccctcattccagctgtggcaggagcatcagaccaggcac
ctcctggcagctcagtcccaggtccaatttctccattctggcttcacagaccgaaccatg
ccttacatgatgctacaccccaaccacaccctgatggccagccaaatgctttcaggggct
attaacaacctcaccagcctctctcaaagttccctgacacccatgaagcagaattcaaag
cttatgtcagagatcagttatgaaagccaaagggggagtagagagattgaggaagatcac
cgaagggataagcgtcagagaaccaccatcaccccagaacagcttgaagtgttgtatcag
cgctacagtatggactcaaaccccaccagaggagtcctggaaggcattgcacgcgatgta
ggcctaacaagacgtgtggttcaggtctggtttcagaatacacgggcccgtgagagaaaa
ggacagttccggtcaatgggaccaggatccagtttcaccttgggtttgaaccacttgcgc
tgcccattctgcagggctctcttcaaggtaaagagtgcccttgatgcccatatgaggtca
cgccactgggccgaagctgaaagagcaggctacaacttatcaatgagtaatggatccaat
gggcagattgggatggctatgtcatctgtcatggacagaccaggcccatcaatctcctcc
aacctcatcccaaaccatggttatgtcatcattaacaaagagttaagtatgaagctacct
gtgacctctttgtcttcaaccaccgatctgaacaacccagaggacgatgatgactatgag
gaagacgatgaggagtacccatgtgaggagggttccagtacggctgaccaagggtctcct
agtcctgagggatctgggggtccaagctcagattggggtgagatgcaaagtctgcaacag
caccaacatcagcagcagcgccaaaggacacagatgagtcacttccaggtactccagctc
agagacttctacaggagccaccgtacccccaaccgacacgagtgtgagacactgggccag
gagttgggactgcctcaccgagttgtgcaggtgtggttccagaatgccagagccaaggag
aagagggccaggagcctgagctctgactctgcagagagggagcaggccgagctgtccgcg
ggagcaggggagagagacagagcttag
DBGET
integrated database retrieval system
