KEGG   Anoplopoma fimbria (sablefish): 129109133
Entry
129109133         CDS       T09102                                 
Name
(RefSeq) tropomyosin alpha-4 chain-like isoform X1
  KO
K09290  tropomyosin 3
Organism
afb  Anoplopoma fimbria (sablefish)
Pathway
afb04260  Cardiac muscle contraction
afb04261  Adrenergic signaling in cardiomyocytes
afb04814  Motor proteins
afb04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:afb00001]
 09140 Cellular Processes
  09142 Cell motility
   04814 Motor proteins
    129109133
   04820 Cytoskeleton in muscle cells
    129109133
 09150 Organismal Systems
  09153 Circulatory system
   04260 Cardiac muscle contraction
    129109133
   04261 Adrenergic signaling in cardiomyocytes
    129109133
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:afb04812]
    129109133
Cytoskeleton proteins [BR:afb04812]
 Eukaryotic cytoskeleton proteins
  Actin filaments / Microfilaments
   Actin-binding proteins
    Tropomyosins
     129109133
SSDB
Motif
Pfam: Tropomyosin TMF_DNA_bd DUF3450 CALCOCO1 Laminin_II MscS_porin ERM_helical Fib_alpha DUF4200 ZapB CENP-F_leu_zip DUF1664 TPR_MLP1_2 Crescentin Sec10_N ATG16 Nuf2_DHR10-like
Other DBs
NCBI-GeneID: 129109133
NCBI-ProteinID: XP_054477093
LinkDB
Position
20:28137030..28147243
AA seq 249 aa
MSGGLNSIDAVKKKIKVLQEQAEDAEDRAVKLQKEVEKEKRSREEAEAEMTSLSRRLQLS
EDNLERVQERLSTTLHKLDEVEKSADESERGMKVIENRALKDEEKMEQLEVQLREAKLIA
EEADRKYEEVARKLVMVEGELERAEDRAEQGESKSRGLEEELKTVFTSAKSLEAQTEKYS
HKEDRYEEEIKNLSNKLKEAESRAESAERSVAKLEKTIDGLEDALTSARNANMELQATLN
QTMEELNSC
NT seq 750 nt   +upstreamnt  +downstreamnt
atgagtggaggactgaacagcatcgatgccgtgaagaagaagatcaaagtgctgcaggag
caggcggaggatgccgaggacagagccgtcaagctgcagaaggaggtggagaaggagaag
aggagcagagaggaggcggaggcggagatgacatctctcagtcgtcgtctgcagctcagc
gaggacaacctggagcgagtccaggagagactgtccaccaccctccacaagctggacgag
gtggagaagtccgccgacgagagcgagagagggatgaaggtgatagagaacagagctctg
aaggatgaggagaagatggagcagctggaggttcagctgagagaagccaagctgatcgct
gaggaggccgaccgtaaatatgaagaggtggctcgtaaactggtgatggtggaaggtgaa
ctggaacgagctgaagacagagctgagcagggagagagtaagagtcgagggttggaggag
gagctgaaaacagtcttcactagtgcaaagtctctggaggcccagactgagaagtactct
cataaggaagacaggtacgaagaggagatcaagaacctgagcaacaaactcaaggaggcg
gagagcagagccgagtctgcagagcgttcagtcgccaaactggagaaaaccatcgacggg
ctggaagatgctttgacttcggccagaaacgccaacatggagcttcaggcgactctgaat
cagaccatggaggagctcaactcctgctga

DBGET integrated database retrieval system