Anoplopoma fimbria (sablefish): 129109133
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Entry
129109133 CDS
T09102
Name
(RefSeq) tropomyosin alpha-4 chain-like isoform X1
KO
K09290
tropomyosin 3
Organism
afb
Anoplopoma fimbria (sablefish)
Pathway
afb04260
Cardiac muscle contraction
afb04261
Adrenergic signaling in cardiomyocytes
afb04814
Motor proteins
afb04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
129109133
04820 Cytoskeleton in muscle cells
129109133
09150 Organismal Systems
09153 Circulatory system
04260 Cardiac muscle contraction
129109133
04261 Adrenergic signaling in cardiomyocytes
129109133
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
afb04812
]
129109133
Cytoskeleton proteins [BR:
afb04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Tropomyosins
129109133
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tropomyosin
TMF_DNA_bd
DUF3450
CALCOCO1
Laminin_II
MscS_porin
ERM_helical
Fib_alpha
DUF4200
ZapB
CENP-F_leu_zip
DUF1664
TPR_MLP1_2
Crescentin
Sec10_N
ATG16
Nuf2_DHR10-like
Motif
Other DBs
NCBI-GeneID:
129109133
NCBI-ProteinID:
XP_054477093
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All DBs
Position
20:28137030..28147243
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AA seq
249 aa
AA seq
DB search
MSGGLNSIDAVKKKIKVLQEQAEDAEDRAVKLQKEVEKEKRSREEAEAEMTSLSRRLQLS
EDNLERVQERLSTTLHKLDEVEKSADESERGMKVIENRALKDEEKMEQLEVQLREAKLIA
EEADRKYEEVARKLVMVEGELERAEDRAEQGESKSRGLEEELKTVFTSAKSLEAQTEKYS
HKEDRYEEEIKNLSNKLKEAESRAESAERSVAKLEKTIDGLEDALTSARNANMELQATLN
QTMEELNSC
NT seq
750 nt
NT seq
+upstream
nt +downstream
nt
atgagtggaggactgaacagcatcgatgccgtgaagaagaagatcaaagtgctgcaggag
caggcggaggatgccgaggacagagccgtcaagctgcagaaggaggtggagaaggagaag
aggagcagagaggaggcggaggcggagatgacatctctcagtcgtcgtctgcagctcagc
gaggacaacctggagcgagtccaggagagactgtccaccaccctccacaagctggacgag
gtggagaagtccgccgacgagagcgagagagggatgaaggtgatagagaacagagctctg
aaggatgaggagaagatggagcagctggaggttcagctgagagaagccaagctgatcgct
gaggaggccgaccgtaaatatgaagaggtggctcgtaaactggtgatggtggaaggtgaa
ctggaacgagctgaagacagagctgagcagggagagagtaagagtcgagggttggaggag
gagctgaaaacagtcttcactagtgcaaagtctctggaggcccagactgagaagtactct
cataaggaagacaggtacgaagaggagatcaagaacctgagcaacaaactcaaggaggcg
gagagcagagccgagtctgcagagcgttcagtcgccaaactggagaaaaccatcgacggg
ctggaagatgctttgacttcggccagaaacgccaacatggagcttcaggcgactctgaat
cagaccatggaggagctcaactcctgctga
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integrated database retrieval system