Anoplopoma fimbria (sablefish): 129109314
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Entry
129109314 CDS
T09102
Name
(RefSeq) LOW QUALITY PROTEIN: carcinoembryonic antigen-related cell adhesion molecule 5-like
KO
K06499
carcinoembryonic antigen-related cell adhesion molecule
Organism
afb
Anoplopoma fimbria (sablefish)
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
afb03037
]
129109314
04147 Exosome [BR:
afb04147
]
129109314
04090 CD molecules [BR:
afb04090
]
129109314
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
afb00537
]
129109314
Cilium and associated proteins [BR:
afb03037
]
Other cilia and associated proteins
Stereociliary proteins
129109314
Exosome [BR:
afb04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
129109314
Exosomal proteins of bladder cancer cells
129109314
CD molecules [BR:
afb04090
]
Proteins
129109314
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
afb00537
]
Antigens
129109314
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_3
ig
I-set
Ig_2
V-set
Ig_5
C2-set_2
V-set_CD47
Ig_6
DUF3042
Podoplanin
Motif
Other DBs
NCBI-GeneID:
129109314
NCBI-ProteinID:
XP_054477318
LinkDB
All DBs
Position
20:complement(18694743..18700138)
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AA seq
512 aa
AA seq
DB search
MARVANVVVTSNTTDMLEYSTVRLSCSSSGSFLSFLWLNSSSEVKESDRVQLSHGGSTLT
IVSVTRYDQGPFRCQVFNPVSNDTSGPVNLSINLRVANVVVTSNTTDMLEYSTVRLSCSS
SGSFLSFLWLNSSSEVKESDRVQLSHGGSTLTIVSVTRYDQGPFRCQVFNPVSNDTSGPV
NLSINYGPENIILTISPSQENYVEGSDITLSCSADSRPAALFQWFLNGDLLSDAVPELRL
MNIQMSQSGNYSCQAFNNKTLRYEMTQPSVVSVLEKISKVSITETNSPIEGNSFNLTCDA
AGSVFTREWMKGGLNLISDDNVALYDNNRVLSFNSLSKKDNGDYVCKVSNTFSQDETKYT
MVVSFGPENVQINGPSEIPWGDTLTLTCSAESVPATYTWILKGTEIHYSSVLTKKTTKPL
DNGNYTCEVMNHITGRNSSATHGLSVTERKSGGLSAGAIAGIVLGLVALCAAAGGGGYYY
KNKIIKKAPPHSDNKEVEEPVYENTSTVYENL
NT seq
1539 nt
NT seq
+upstream
nt +downstream
nt
atggcgcgagttgccaatgttgtggtaacttcaaacacaacagacatgttggagtacagt
actgtccgtctgtcctgctcctcctctggatccttcctctctttcctctggctgaacagc
agctctgaggtcaaagaaagtgacagagttcagctcagtcatggaggctccactctcact
atagtcagtgtgacccgctatgaccagggaccattcaggtgccaggtgtttaatcctgtt
agcaatgacaccagtggtccagtaaacctctccatcaacttgcgtgttgccaatgttgtg
gtaacttcaaacacaacagacatgttggagtacagtactgtccgtctgtcctgctcctcc
tctggatccttcctctctttcctctggctgaacagcagctctgaggtcaaagaaagtgac
agagttcagctcagtcatggaggctccactctcactatagtcagtgtgacccgctatgac
cagggaccattcaggtgccaggtgtttaatcctgttagcaatgacaccagtggtccagta
aacctctccatcaactatggcccagaaaatattattcttacaatatctccgtcacaagaa
aactatgtggaagggtcagacatcaccctgtcctgttcagctgactcaagacctgctgcc
ctgttccagtggtttctgaatggagatctgctgtctgatgctgtaccagagctcagattg
atgaacattcagatgagtcagagtgggaactacagctgtcaagcctttaacaataaaact
ctgagatatgaaatgactcagccctcagttgtctctgtattggagaaaatatcaaaggtt
tctatcacagaaaccaactcgccgattgaagggaactctttcaatttaacatgtgatgct
gctggctctgtgtttaccagagagtggatgaagggcggcttaaatctgatttcggatgac
aacgtggcactttacgacaacaacagagtgctgtcttttaacagtctgagtaaaaaagac
aatggagattatgtttgtaaagtcagcaacaccttcagccaggatgaaactaaatacacc
atggttgtttcctttggaccagaaaatgttcaaatcaacggtccaagtgagataccttgg
ggagataccttaacattaacctgctctgctgagtccgtacctgctacctacacctggata
ctgaaagggacagagatacactattcttctgttttgacaaaaaaaaccactaaacctttg
gataatggcaactacacctgtgaagtgatgaatcatataactgggagaaattcatcagcg
acccatggactgtctgtaacagaaagaaagtctggaggtctttcagctggtgccattgct
ggaatagttttaggtttagtggctctttgtgcagcagctggtggaggggggtattattat
aaaaacaaaatcatcaagaaagctcctccacattctgataataaagaagtggaagaacct
gtgtatgagaacacatcaacggtatatgaaaacttataa
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