Anoplopoma fimbria (sablefish): 129110661
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Entry
129110661 CDS
T09102
Symbol
trdmt1
Name
(RefSeq) tRNA (cytosine(38)-C(5))-methyltransferase
KO
K15336
tRNA (cytosine38-C5)-methyltransferase [EC:
2.1.1.204
]
Organism
afb
Anoplopoma fimbria (sablefish)
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
afb03016
]
129110661 (trdmt1)
Enzymes [BR:
afb01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.204 tRNA (cytosine38-C5)-methyltransferase
129110661 (trdmt1)
Transfer RNA biogenesis [BR:
afb03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
129110661 (trdmt1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_methylase
Motif
Other DBs
NCBI-GeneID:
129110661
NCBI-ProteinID:
XP_054478789
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All DBs
Position
21:10602781..10616379
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AA seq
384 aa
AA seq
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MEGLRVLELYSGIGGMHYALKESGITAQVVAAIDINTTANQIYTHNFPDTTLWNKTIEGI
TLDDFNKLPFDMLLMSPPCQPFTRIGLQGDIADPRTKSFLYILDLLPRLSRLPRFILLEN
VKGFESSSARDRLVKTLMECGYTFQEIMVSPTSVGIPNSRLRYFLTAKLSAENGSTQSSK
ILDAFPHPAESGSPERNAALDPPHPATCQPEEDMQGGHVLYKQETKIDAQRKLSQNNDLS
VRQIQDFLEPQREVNVEHYLLPPRTLLRYALLLDIVQPTCRRSVCFTKGYGRYVEGTGSV
LQCCTETEMEKVFRGLDQLSEEEKLQQLLKLQLRYFTPREVANLMGFPQSFSFPKQISTK
QKYRVLGNSLNVVVVSRLLQLLVS
NT seq
1155 nt
NT seq
+upstream
nt +downstream
nt
atggagggtctgcgggtgctcgagctctacagcgggataggaggcatgcattatgctctg
aaagagagtggtataactgcccaggtagtggctgccatcgacatcaacacaacagccaat
caaatctacacgcacaatttccctgacaccaccctctggaacaagaccattgagggcata
actctagatgacttcaataaattaccttttgacatgcttttgatgagccctccttgccag
ccttttaccaggataggacttcagggtgatattgctgaccccagaaccaagagcttcctc
tatatcctagatcttctgccaaggctgagcaggctgccccgcttcatcctgctggagaat
gtgaaaggcttcgagagctcctctgccagggaccgcttggtgaagacactcatggaatgc
ggatacactttccaggagatcatggtctcacccacaagtgttgggatcccaaattcaaga
ctgcgttatttcctgactgctaagctgtcagcagaaaacggaagcacccagagttcaaag
attttagatgccttcccacatcctgctgagagcggttctcctgagcggaacgcggccttg
gatcctccacacccagctacctgccagccagaggaggacatgcaggggggtcacgtcctt
tataaacaagagacaaaaatagatgcccagagaaagctgagtcagaacaacgatctgtcc
gtcaggcagatccaagacttcctggagccgcagagggaagtaaacgtggagcactatctt
cttcctcccagaacactgctgcgctatgctctgctcttggacattgtccagcccacatgc
aggaggtctgtgtgctttaccaaaggctatggccgctatgtggagggaactggctcagta
ctgcagtgctgcacggaaacggagatggagaaggtgtttagaggtctggaccagttatct
gaagaagagaaactccagcagctgttgaaactccagttgcgttatttcacccccagagaa
gttgccaacctgatgggcttccctcaaagcttctcctttcccaaacagatcagcaccaag
cagaagtacagagttctaggaaacagcctgaatgttgtggtggtgtccagactcctacaa
ctgctggtgtcctag
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