Anoplopoma fimbria (sablefish): 129113453
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Entry
129113453 CDS
T09102
Symbol
hlcs
Name
(RefSeq) biotin--protein ligase isoform X1
KO
K01942
biotin---protein ligase [EC:
6.3.4.9
6.3.4.10
6.3.4.11
6.3.4.15
]
Organism
afb
Anoplopoma fimbria (sablefish)
Pathway
afb00780
Biotin metabolism
afb01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00780 Biotin metabolism
129113453 (hlcs)
Enzymes [BR:
afb01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.4 Other carbon-nitrogen ligases
6.3.4.9 biotin---[methylmalonyl-CoA-carboxytransferase] ligase
129113453 (hlcs)
6.3.4.10 biotin---[propionyl-CoA-carboxylase (ATP-hydrolysing)] ligase
129113453 (hlcs)
6.3.4.11 biotin---[methylcrotonoyl-CoA-carboxylase] ligase
129113453 (hlcs)
6.3.4.15 biotin---[biotin carboxyl-carrier protein] ligase
129113453 (hlcs)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
BPL_LplA_LipB
BPL_N
BPL_C
Motif
Other DBs
NCBI-GeneID:
129113453
NCBI-ProteinID:
XP_054481731
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All DBs
Position
24:complement(22088243..22121192)
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AA seq
920 aa
AA seq
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MLITLCYVYLWVRFHKCYSVLIRNSLSRLSSGSGSFSFGVCSSSSAAGPATGSLTGGRQP
GPPPTEDNVFLQLGDKAVYVTEPQACDDLSKWTVLLGSSLVCRPRIENISFIIEATGHRV
GYHSLHTSNKKVLKWSDYCLPLARSPGQPFRAVAQASVDNFSRLGVAFIEDRLQLDNGLT
PSKIIPVLLQESTLSELLEKQTLPCLCEARTGEGIAEPLPRHLSADRHHPSCRKGSLLLT
PELKRRLEERRGSEPLCGTKDPGPVCDSADRSLGNHQHMEGHRHHLHLSSCHECLELENS
TILSVKYASADNIPDLPDDNSAGPDSGDETLDDVEHDDKGCSGQSGGLDCNSKPPNVLLF
TGGCQERFQLVRQVLSECVNMEDNIIYPLQPQQALSDPWLDNAKLLVLAEEEPLTPQLQT
RFLTYLSQGGRVLGLASTLCPAGLCLEAREGQRGRVGRLSFTREDSTELELSVLSSGKVY
VRDAQGGGEVELWGELKGDVPHQKDMVVVRVTHGEDGGEAVLCQAHLEIAPDPQNLTTKG
FDELKVSNTLRYEVLTEILTSLGLSCELNQAPASSPVHLLATSQEAKTSFVEWLQTRADQ
NGLLTLSKASLSLVSSSELQDGPSLPEGSVALVTDSSESQGWAQFSMETYRKNLKTSLLG
HTLLYAEVASSTMDLLQGLTLHLPKELGLIAVAARQSQGRGRGGNAWLSPLGCAMFTLTV
QVELSSRLGQRIPFLQHLAALAVVEAVRTLPGYQDIDLRVKWPNDIYYSNLMKLGGVLVT
STVIGSTFHLLIGCGFNVTNSNPTVCINDLIQQHNTQHNSSLQPLRCDQLIARTVSSLEA
LIGSFQRGGPDTVLPTYYKRWLHSGTLVRLWSEDGLEAEVVGLDQNGFLQVHNKEHGVVS
VEPDGNSFDMLKNLVVIKMR
NT seq
2763 nt
NT seq
+upstream
nt +downstream
nt
atgcttataacgttgtgctacgtctatctctgggtgcgcttccacaagtgctactcggtg
ctgatacgaaacagcctgtcacgactaagcagcggcagcggcagcttcagcttcggagtc
tgctcctccagctcggcagcgggaccggccacagggtcgctgaccgggggccggcaaccc
ggtccgcctccgaccgaggacaacgtcttcctccagctgggagacaaggccgtctatgtc
acggagccccaggcatgtgacgacctcagcaaatggaccgtgctgttggggtcctctctg
gtttgcaggccccgaatagagaacatttcattcatcatagaagctacgggacacagagtg
ggctaccattctcttcacacgtccaataagaaagtgctgaagtggtctgactactgcctc
cctctggcccgtagccccggccagcccttcagggccgtggctcaggccagtgtggacaac
ttcagtcggctgggggtggcttttatcgaagatcgccttcagctggacaatggactgaca
ccgtcaaagataatccctgtcctcctccaagaatccaccctcagcgagctcctggagaag
cagacactaccatgtctctgtgaagcacgaactggagagggcattgctgagcctttgcca
cgtcacctatcggccgatcgccatcacccatcgtgccgcaaaggcagcctcctcctcacc
ccggagctcaagaggaggttggaggagcggcgagggtcggagccactttgcggcacaaag
gatccgggacccgtttgcgactctgcggaccgctccttggggaaccatcaacacatggag
ggccacaggcaccacctccatctgtccagctgccacgagtgcttggagctggagaacagc
accatcctctcagtcaagtatgcttcggctgataacattccagaccttcccgatgacaac
tcagcagggccggacagtggagatgagactctggatgacgtcgagcacgatgacaaaggg
tgttctgggcagagtggtggactggactgtaacagcaagccgccaaatgttctgctgttc
accggaggctgccaggagcgttttcagttagtccggcaggttttatcagagtgtgtaaac
atggaagacaacatcatatatcccctccaaccacagcaggctctcagcgacccgtggctg
gacaacgccaagctcctcgtcctggcagaggaggagcccctgaccccccagctccagacc
cgttttctcacctacctgagccaggggggcagggtgctggggctggcctccaccctgtgc
ccggcgggcctctgcctggaggccagggaggggcaacgcggccgggtcggcaggctgagc
ttcacgagggaggacagcacagagctggagctaagcgtgttgtcaagtggcaaggtctac
gtcagggatgcacagggaggaggggaggtggagctttggggggagctaaaaggggacgtc
ccccatcagaaggacatggttgtagtcagggtgacccatggagaggacggtggggaggct
gtcctctgtcaggcccacctggaaattgctccagacccccagaatttgacgaccaaaggc
ttcgatgaactgaaagtcagcaacacgctgcgttatgaagtcttgacggagatcctcacc
tctctgggcctcagctgtgagctgaaccaggctccagcctcaagcccggtccacctgctg
gccacctctcaggaggccaagaccagctttgtggaatggctgcagacacgtgcggatcaa
aatggcctcctcacattgtccaaggcctctctctcgctggtgtccagttctgagctccag
gacggtccctcgctgcccgagggctccgtggccctggtcaccgactcctcagagtctcag
ggctgggcgcagttcagcatggagacctacagaaagaacctgaagaccagcctactgggg
cacaccctgctgtacgccgaggtcgcctcgtccaccatggacctgctacaaggcttgact
ctgcacttaccaaaggaactgggtttgatagcggttgctgctcgacagagccagggcaga
ggtcggggtgggaacgcctggctcagccctctgggttgcgccatgttcactctgacggtg
caggtggagctgagctccaggctgggacagaggatccccttcctgcagcatctggccgct
ctggctgtggtggaggctgttcgtacacttcctggataccaggacatagacttgagggtg
aagtggcccaatgacatctattacagtaacctgatgaagctcggtggagtactggtgact
tccacagtgataggatcgacctttcacctgctcataggctgtgggttcaacgtgacgaac
agcaacccgacggtgtgcatcaacgacctgatccagcagcacaacacgcagcataacagc
agcctgcagccgctccgctgcgaccagctcatcgctcgcacggtcagcagcctggaggcc
ctcatcggcagcttccagcgggggggcccagacaccgtcctgcccacctactacaagagg
tggcttcacagcgggactctggtgcgtctctggagcgaggacggactggaggccgaggtg
gtgggcctggaccaaaacggcttcctccaggtgcacaacaaggagcacggcgtggtctcc
gtggagcccgacggcaactccttcgacatgctgaagaacctggtggtcatcaagatgcgt
tag
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