Aliarcobacter faecis: AFAEC_1223
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Entry
AFAEC_1223 CDS
T06664
Name
(GenBank) FAD-dependent oxidoreductase, possible FAD-dependent cmnm(5)s(2)U34 oxidoreductase
KO
K15461
tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein [EC:
2.1.1.61
1.5.-.-]
Organism
afc
Aliarcobacter faecis
Brite
KEGG Orthology (KO) [BR:
afc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
afc03016
]
AFAEC_1223
Enzymes [BR:
afc01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.61 tRNA 5-(aminomethyl)-2-thiouridylate-methyltransferase
AFAEC_1223
Transfer RNA biogenesis [BR:
afc03016
]
Prokaryotic type
tRNA modification factors
Other tRNA modification factors
AFAEC_1223
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DAO
NAD_binding_8
FAD_binding_2
Pyr_redox_2
Thi4
GDI
Lycopene_cycl
Pyr_redox
HI0933_like
TrkA_N
GIDA
FAD_binding_3
SHS2_FTSA
DUF4532
Motif
Other DBs
NCBI-ProteinID:
QKF73388
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Position
complement(1198645..1199817)
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AA seq
390 aa
AA seq
DB search
MKKYDFIIIGAGISGCSLAYFLNKNSKNILLLEKNSDVAFGASGAAGAFLSPLLGIENKF
KSLVTTSLKFSIDFYKNNFPNLLNNCGTIRIPKNSIDEEKFQSYMPFMDFDFEEKERGYF
FPIGSTVKPYEICKALSNDIEKVFDYEVKNIEQIDGYWKINDDLLASKLFLCTGANISLV
KESYFDIRAVWGQKIDILSSTKLEFNYHKECSLSKSVEQAGKQKISIGATHNRFSEDMSD
TSYNLNLKNINLLSHNGKSLKIIEEDIEKLLNKAKDIKKLEDIEVIDIKIGARASSIDYF
PMVGSLVDSKSSFFKYPHIKNGTHIKNENLELIPNLFTLNGVGGRGFVLAPYLANVLVES
IINGKKMPEEIENFRLFSRWAKKLNNRGKD
NT seq
1173 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaagtatgattttataataattggtgcaggaatttctggttgttcattggcatat
tttttgaataaaaattcaaaaaatattttattacttgaaaaaaattctgatgttgctttt
ggagcaagtggtgcagctggggcttttttatccccacttttaggaattgaaaataaattt
aagagtttggttactacatctttaaaattttcaatagatttttataaaaataattttcca
aatttattaaataattgtggaacaataagaataccaaaaaatagtattgatgaagagaaa
tttcaaagttatatgccatttatggattttgattttgaagaaaaagagagaggttatttt
tttcctattggaagtacagttaaaccttatgagatttgtaaagctttgagtaatgatatt
gaaaaagtttttgattatgaagttaaaaatattgagcaaatagatggttattggaaaata
aatgatgatttattggcttcaaaactatttttatgtacaggtgcaaatattagtttagta
aaggaaagttattttgatataagagcagtttgggggcaaaaaatagatattctaagctct
acaaaattggaatttaattatcataaagagtgttctttatcaaaaagtgttgagcaagct
ggaaaacaaaaaatctcaataggagcaactcataatagattttcagaagatatgagtgat
acttcttataatttaaatctaaaaaatataaatcttttatctcataatggtaagagttta
aagattatagaagaagatatagaaaagctattaaataaagcaaaagatataaagaagctt
gaagatattgaagttattgatataaaaattggtgcaagagcttctagtattgactatttt
cctatggttggaagtttagtagatagtaaaagtagtttttttaaatatccacatataaaa
aatggaactcatataaaaaatgaaaatttagaattaattcctaatttatttactctaaat
ggagtaggggggcgaggttttgtattagccccatatttagcaaatgttttagtagaatct
ataataaatggtaaaaaaatgccagaagagatagaaaattttagactattttctagatgg
gctaaaaaattaaataatagaggtaaagattga
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