Aliarcobacter faecis: AFAEC_2056
Help
Entry
AFAEC_2056 CDS
T06664
Name
(GenBank) radical SAM methylthiotransferase, MiaB/RimO family
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
afc
Aliarcobacter faecis
Brite
KEGG Orthology (KO) [BR:
afc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
afc03009
]
AFAEC_2056
Enzymes [BR:
afc01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
AFAEC_2056
Ribosome biogenesis [BR:
afc03009
]
Prokaryotic type
ribosomal protein modification factors
AFAEC_2056
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM_2
CLP1_P
Motif
Other DBs
NCBI-ProteinID:
QKF74207
LinkDB
All DBs
Position
2040019..2041359
Genome browser
AA seq
446 aa
AA seq
DB search
MKFSEEKPKKKLHMVSLGCTKNLVDSEVMLGRLKDYELTDDESQADLIIVNTCGFIDSAK
EESINTTLNLHNERKKDSVLVMAGCLSERYKDDLQKELTEIDIFTGVGDYDKIDKLVHEK
RSSFSNEVFLANEENDRVITGSSYHAYVKLSEGCNQSCSFCAIPSFKGKLHSRTLNSLIK
EVKNLVSKGYKDFSFVSQDSSSFLRDLGHNDGLEQLISEVEKIEGVKTARILYLYPSTTT
LSLIDKIADSKVFVNYFDMPLQHISQNMLKIMKRGKGAEKLVELMLYMKSKPNSFVRTTF
IAGHPGETQTDFEELCNFVEEFGFDRANVFSYSDEEGTSAETRDDKVEQELVDERAEILG
EIIFETTIKSLENDIGKTFEVYIDGESNEHEYLLSARKTLWAPEIDGEIFINDNDLEEPI
IFGEIYEVMATELAGDKLLAKIIKKV
NT seq
1341 nt
NT seq
+upstream
nt +downstream
nt
atgaaatttagtgaagaaaaaccgaaaaaaaaactgcatatggtaagccttggctgtaca
aaaaatctagtagatagtgaagttatgcttggtcgtcttaaagattatgaactaacagat
gatgaatcacaagcagatttaatcattgtaaatacttgtggatttattgatagtgcaaaa
gaagagagtattaatacaactttaaatctacacaacgagagaaaaaaagattctgtttta
gttatggctggatgtttaagtgaaagatataaagatgacctacaaaaagagcttacagag
atagatatttttacaggagttggggattatgacaaaatcgacaaattagttcatgaaaaa
agaagtagtttttcaaatgaagtatttttagcgaatgaagagaatgatagagtaataact
gggtcaagctaccatgcttatgtaaaattaagtgagggctgtaaccagtcttgctctttt
tgtgcaattccctctttcaaaggaaaacttcattcaagaactctaaactctttaataaaa
gaggttaaaaatctagtaagtaaaggttataaagatttctcttttgtatctcaggattca
tcatcatttttacgagatttaggacacaatgatggtttagagcagttaataagcgaagtt
gagaaaatagaaggagtaaaaactgcaaggattttatacctatatccaagtacaacaact
ctaagtttaatagacaaaattgcagactctaaagtttttgtaaactactttgatatgcca
cttcaacatatctctcaaaatatgcttaaaattatgaaaagagggaaaggtgcagaaaag
ttagtagagctaatgctttatatgaaatcaaaaccaaactcttttgtgcgaactactttt
atagcaggtcatccaggggaaacacaaactgattttgaagagctttgcaattttgtagaa
gagtttggatttgatagagcaaatgttttttcatactctgatgaagaaggaacaagtgct
gaaactagagatgataaagttgaacaagagttagtagatgaaagagctgaaattttggga
gagattatttttgaaacaactataaaatctcttgaaaatgatattggaaaaacttttgaa
gtttatatagatggagagagcaatgagcatgaatatcttttaagtgctagaaaaactctt
tgggctccagaaatagatggagagatttttataaatgataatgatttagaagagccaata
atttttggagagatttatgaagttatggcaacagaacttgctggagataaacttctagca
aaaattataaaaaaagtatga
DBGET
integrated database retrieval system
